RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
ZNF397-208ENST00000590470 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
ZNF397-208ENST00000590470 ABCC9O60706 1549 aa18.53■□□□□ 0.56
ZNF397-208ENST00000590470 ZCCHC6Q5VYS8 1495 aaKnown RBP18.32■□□□□ 0.52
ZNF397-208ENST00000590470 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
ZNF397-208ENST00000590470 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
ZNF397-208ENST00000590470 NACADO15069 1562 aa17.92■□□□□ 0.46
ZNF397-208ENST00000590470 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
ZNF397-208ENST00000590470 MYO15BQ96JP2 1530 aa17.86■□□□□ 0.45
ZNF397-208ENST00000590470 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
ZNF397-208ENST00000590470 SCRIBQ14160 1630 aa17.75■□□□□ 0.43
ZNF397-208ENST00000590470 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
ZNF397-208ENST00000590470 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
ZNF397-208ENST00000590470 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
ZNF397-208ENST00000590470 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
ZNF397-208ENST00000590470 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
ZNF397-208ENST00000590470 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
ZNF397-208ENST00000590470 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
ZNF397-208ENST00000590470 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
ZNF397-208ENST00000590470 EIF4G1Q04637 1599 aaKnown RBP16.88■□□□□ 0.29
ZNF397-208ENST00000590470 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
ZNF397-208ENST00000590470 WIZO95785 1651 aa16.86■□□□□ 0.29
ZNF397-208ENST00000590470 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
ZNF397-208ENST00000590470 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
ZNF397-208ENST00000590470 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
ZNF397-208ENST00000590470 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
ZNF397-208ENST00000590470 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
ZNF397-208ENST00000590470 BAZ1BQ9UIG0 1483 aaKnown RBP16.58■□□□□ 0.24
ZNF397-208ENST00000590470 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
ZNF397-208ENST00000590470 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
ZNF397-208ENST00000590470 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
ZNF397-208ENST00000590470 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
ZNF397-208ENST00000590470 NESP48681 1621 aa16.19■□□□□ 0.18
ZNF397-208ENST00000590470 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
ZNF397-208ENST00000590470 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
ZNF397-208ENST00000590470 CFTRP13569 1480 aa16.1■□□□□ 0.17
ZNF397-208ENST00000590470 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
ZNF397-208ENST00000590470 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
ZNF397-208ENST00000590470 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
ZNF397-208ENST00000590470 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
ZNF397-208ENST00000590470 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
ZNF397-208ENST00000590470 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
ZNF397-208ENST00000590470 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
ZNF397-208ENST00000590470 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
ZNF397-208ENST00000590470 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
ZNF397-208ENST00000590470 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
ZNF397-208ENST00000590470 CUX1P39880 1505 aa15.87■□□□□ 0.13
ZNF397-208ENST00000590470 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
ZNF397-208ENST00000590470 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
ZNF397-208ENST00000590470 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
ZNF397-208ENST00000590470 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
ZNF397-208ENST00000590470 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
ZNF397-208ENST00000590470 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
ZNF397-208ENST00000590470 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.11
ZNF397-208ENST00000590470 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
ZNF397-208ENST00000590470 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
ZNF397-208ENST00000590470 FAM9AQ8IZU1 332 aaPredicted RBP15.7■□□□□ 0.1
ZNF397-208ENST00000590470 WDR62O43379 1518 aa15.69■□□□□ 0.1
ZNF397-208ENST00000590470 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
ZNF397-208ENST00000590470 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
ZNF397-208ENST00000590470 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
ZNF397-208ENST00000590470 SOGA1O94964 1423 aa15.65■□□□□ 0.1
ZNF397-208ENST00000590470 CUX2O14529 1486 aa15.61■□□□□ 0.09
ZNF397-208ENST00000590470 WDR97A6NE52 1622 aa15.59■□□□□ 0.09
ZNF397-208ENST00000590470 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
ZNF397-208ENST00000590470 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
ZNF397-208ENST00000590470 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
ZNF397-208ENST00000590470 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
ZNF397-208ENST00000590470 ABCA10Q8WWZ4 1543 aa15.52■□□□□ 0.07
ZNF397-208ENST00000590470 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
ZNF397-208ENST00000590470 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
ZNF397-208ENST00000590470 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
ZNF397-208ENST00000590470 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
ZNF397-208ENST00000590470 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
ZNF397-208ENST00000590470 LOC105371045A0A1W2PR82 267 aa15.46■□□□□ 0.07
ZNF397-208ENST00000590470 PBRM1Q86U86 1689 aa15.46■□□□□ 0.07
ZNF397-208ENST00000590470 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
ZNF397-208ENST00000590470 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
ZNF397-208ENST00000590470 EEA1Q15075 1411 aa15.42■□□□□ 0.06
ZNF397-208ENST00000590470 IGF1RP08069 1367 aa15.39■□□□□ 0.05
ZNF397-208ENST00000590470 GRIN2BQ13224 1484 aa15.33■□□□□ 0.05
ZNF397-208ENST00000590470 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.05
ZNF397-208ENST00000590470 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
ZNF397-208ENST00000590470 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
ZNF397-208ENST00000590470 KIF21BO75037 1637 aa15.32■□□□□ 0.04
ZNF397-208ENST00000590470 CUL7Q14999 1698 aa15.32■□□□□ 0.04
ZNF397-208ENST00000590470 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
ZNF397-208ENST00000590470 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
ZNF397-208ENST00000590470 ADAMTS12P58397 1594 aa15.3■□□□□ 0.04
ZNF397-208ENST00000590470 GOLGA3Q08378 1498 aa15.27■□□□□ 0.04
ZNF397-208ENST00000590470 UBTFP17480 764 aaKnown RBP15.26■□□□□ 0.03
ZNF397-208ENST00000590470 CHD1O14646 1710 aa15.24■□□□□ 0.03
ZNF397-208ENST00000590470 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
ZNF397-208ENST00000590470 FBLN2P98095 1184 aa15.24■□□□□ 0.03
ZNF397-208ENST00000590470 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
ZNF397-208ENST00000590470 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
ZNF397-208ENST00000590470 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
ZNF397-208ENST00000590470 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
ZNF397-208ENST00000590470 CTTNBP2Q8WZ74 1663 aa15.18■□□□□ 0.02
ZNF397-208ENST00000590470 GRIN2AQ12879 1464 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms