RNA–Protein interactions for RNA: ENST00000590457.5

MGRN1-212, Transcript of mahogunin ring finger 1, humanhuman

TSL 3

Gene MGRN1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1-212ENST00000590457 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
MGRN1-212ENST00000590457 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
MGRN1-212ENST00000590457 ABCC9O60706 1549 aa23.72■■□□□ 1.39
MGRN1-212ENST00000590457 NACADO15069 1562 aa23■■□□□ 1.27
MGRN1-212ENST00000590457 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
MGRN1-212ENST00000590457 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
MGRN1-212ENST00000590457 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
MGRN1-212ENST00000590457 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
MGRN1-212ENST00000590457 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
MGRN1-212ENST00000590457 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
MGRN1-212ENST00000590457 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
MGRN1-212ENST00000590457 SCRIBQ14160 1630 aa22.22■■□□□ 1.15
MGRN1-212ENST00000590457 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
MGRN1-212ENST00000590457 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.13
MGRN1-212ENST00000590457 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
MGRN1-212ENST00000590457 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
MGRN1-212ENST00000590457 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
MGRN1-212ENST00000590457 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
MGRN1-212ENST00000590457 BAZ1AQ9NRL2 1556 aaPredicted RBP21.35■■□□□ 1.01
MGRN1-212ENST00000590457 SMARCA4P51532 1647 aa21.33■■□□□ 1
MGRN1-212ENST00000590457 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
MGRN1-212ENST00000590457 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
MGRN1-212ENST00000590457 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
MGRN1-212ENST00000590457 ATAD2BQ9ULI0 1458 aa21.17■□□□□ 0.98
MGRN1-212ENST00000590457 HMGXB3Q12766 1538 aa21.14■□□□□ 0.98
MGRN1-212ENST00000590457 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
MGRN1-212ENST00000590457 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
MGRN1-212ENST00000590457 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
MGRN1-212ENST00000590457 WIZO95785 1651 aa20.9■□□□□ 0.94
MGRN1-212ENST00000590457 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
MGRN1-212ENST00000590457 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
MGRN1-212ENST00000590457 NESP48681 1621 aa20.53■□□□□ 0.88
MGRN1-212ENST00000590457 CADPSQ9ULU8 1353 aa20.53■□□□□ 0.88
MGRN1-212ENST00000590457 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
MGRN1-212ENST00000590457 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
MGRN1-212ENST00000590457 CFTRP13569 1480 aa20.46■□□□□ 0.87
MGRN1-212ENST00000590457 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
MGRN1-212ENST00000590457 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
MGRN1-212ENST00000590457 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
MGRN1-212ENST00000590457 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
MGRN1-212ENST00000590457 CUX2O14529 1486 aa20.35■□□□□ 0.85
MGRN1-212ENST00000590457 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.84
MGRN1-212ENST00000590457 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
MGRN1-212ENST00000590457 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
MGRN1-212ENST00000590457 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
MGRN1-212ENST00000590457 WDR62O43379 1518 aa20.21■□□□□ 0.83
MGRN1-212ENST00000590457 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
MGRN1-212ENST00000590457 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
MGRN1-212ENST00000590457 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
MGRN1-212ENST00000590457 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
MGRN1-212ENST00000590457 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
MGRN1-212ENST00000590457 CUX1P39880 1505 aa19.84■□□□□ 0.77
MGRN1-212ENST00000590457 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
MGRN1-212ENST00000590457 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
MGRN1-212ENST00000590457 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
MGRN1-212ENST00000590457 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
MGRN1-212ENST00000590457 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
MGRN1-212ENST00000590457 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
MGRN1-212ENST00000590457 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
MGRN1-212ENST00000590457 SOGA1O94964 1423 aa19.7■□□□□ 0.74
MGRN1-212ENST00000590457 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
MGRN1-212ENST00000590457 ZNF608Q9ULD9 1512 aaPredicted RBP19.68■□□□□ 0.74
MGRN1-212ENST00000590457 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
MGRN1-212ENST00000590457 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
MGRN1-212ENST00000590457 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
MGRN1-212ENST00000590457 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.72
MGRN1-212ENST00000590457 ABCA5Q8WWZ7 1642 aa19.55■□□□□ 0.72
MGRN1-212ENST00000590457 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
MGRN1-212ENST00000590457 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
MGRN1-212ENST00000590457 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
MGRN1-212ENST00000590457 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
MGRN1-212ENST00000590457 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
MGRN1-212ENST00000590457 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
MGRN1-212ENST00000590457 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
MGRN1-212ENST00000590457 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
MGRN1-212ENST00000590457 CHD1O14646 1710 aa19.4■□□□□ 0.7
MGRN1-212ENST00000590457 SYNJ2O15056 1496 aa19.4■□□□□ 0.7
MGRN1-212ENST00000590457 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
MGRN1-212ENST00000590457 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
MGRN1-212ENST00000590457 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
MGRN1-212ENST00000590457 FHAD1B1AJZ9 1412 aa19.31■□□□□ 0.68
MGRN1-212ENST00000590457 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
MGRN1-212ENST00000590457 CUL7Q14999 1698 aa19.27■□□□□ 0.68
MGRN1-212ENST00000590457 GRIN2AQ12879 1464 aa19.27■□□□□ 0.67
MGRN1-212ENST00000590457 FBLN2P98095 1184 aa19.26■□□□□ 0.67
MGRN1-212ENST00000590457 TRIM41Q8WV44 630 aa19.25■□□□□ 0.67
MGRN1-212ENST00000590457 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
MGRN1-212ENST00000590457 IGF1RP08069 1367 aa19.2■□□□□ 0.66
MGRN1-212ENST00000590457 NUP160Q12769 1436 aa19.19■□□□□ 0.66
MGRN1-212ENST00000590457 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
MGRN1-212ENST00000590457 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
MGRN1-212ENST00000590457 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.65
MGRN1-212ENST00000590457 ARHGEF11O15085 1522 aa19.13■□□□□ 0.65
MGRN1-212ENST00000590457 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
MGRN1-212ENST00000590457 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
MGRN1-212ENST00000590457 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
MGRN1-212ENST00000590457 CARMIL1Q5VZK9 1371 aa19.11■□□□□ 0.65
MGRN1-212ENST00000590457 EEA1Q15075 1411 aa19.09■□□□□ 0.65
MGRN1-212ENST00000590457 SHROOM2Q13796 1616 aa19.06■□□□□ 0.64
MGRN1-212ENST00000590457 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms