RNA–Protein interactions for RNA: ENST00000590431.6

TM6SF2-204, Transcript of transmembrane 6 superfamily member 2, humanhuman

TSL 3

Gene TM6SF2, Length 737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF2-204ENST00000590431 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
TM6SF2-204ENST00000590431 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
TM6SF2-204ENST00000590431 ABCC9O60706 1549 aa24.1■■□□□ 1.45
TM6SF2-204ENST00000590431 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
TM6SF2-204ENST00000590431 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
TM6SF2-204ENST00000590431 NACADO15069 1562 aa22.8■■□□□ 1.24
TM6SF2-204ENST00000590431 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
TM6SF2-204ENST00000590431 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
TM6SF2-204ENST00000590431 PABPN1Q86U42 306 aaKnown RBP eCLIP22.48■■□□□ 1.19
TM6SF2-204ENST00000590431 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
TM6SF2-204ENST00000590431 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.17
TM6SF2-204ENST00000590431 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
TM6SF2-204ENST00000590431 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
TM6SF2-204ENST00000590431 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
TM6SF2-204ENST00000590431 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
TM6SF2-204ENST00000590431 CC2D2AQ9P2K1 1620 aa21.78■■□□□ 1.08
TM6SF2-204ENST00000590431 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
TM6SF2-204ENST00000590431 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
TM6SF2-204ENST00000590431 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
TM6SF2-204ENST00000590431 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
TM6SF2-204ENST00000590431 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
TM6SF2-204ENST00000590431 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
TM6SF2-204ENST00000590431 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
TM6SF2-204ENST00000590431 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
TM6SF2-204ENST00000590431 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
TM6SF2-204ENST00000590431 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
TM6SF2-204ENST00000590431 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
TM6SF2-204ENST00000590431 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
TM6SF2-204ENST00000590431 NESP48681 1621 aa20.76■□□□□ 0.91
TM6SF2-204ENST00000590431 WIZO95785 1651 aa20.66■□□□□ 0.9
TM6SF2-204ENST00000590431 CUX2O14529 1486 aa20.63■□□□□ 0.89
TM6SF2-204ENST00000590431 LAMC3Q9Y6N6 1575 aa20.56■□□□□ 0.88
TM6SF2-204ENST00000590431 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
TM6SF2-204ENST00000590431 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
TM6SF2-204ENST00000590431 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
TM6SF2-204ENST00000590431 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
TM6SF2-204ENST00000590431 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
TM6SF2-204ENST00000590431 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
TM6SF2-204ENST00000590431 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
TM6SF2-204ENST00000590431 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
TM6SF2-204ENST00000590431 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
TM6SF2-204ENST00000590431 CFTRP13569 1480 aa20.2■□□□□ 0.82
TM6SF2-204ENST00000590431 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
TM6SF2-204ENST00000590431 WDR62O43379 1518 aa20.2■□□□□ 0.82
TM6SF2-204ENST00000590431 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
TM6SF2-204ENST00000590431 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
TM6SF2-204ENST00000590431 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
TM6SF2-204ENST00000590431 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
TM6SF2-204ENST00000590431 ZNF608Q9ULD9 1512 aaPredicted RBP19.8■□□□□ 0.76
TM6SF2-204ENST00000590431 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
TM6SF2-204ENST00000590431 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
TM6SF2-204ENST00000590431 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
TM6SF2-204ENST00000590431 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
TM6SF2-204ENST00000590431 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
TM6SF2-204ENST00000590431 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
TM6SF2-204ENST00000590431 EIF4G3O43432 1585 aaKnown RBP19.69■□□□□ 0.74
TM6SF2-204ENST00000590431 TARBP1Q13395 1621 aaKnown RBP19.67■□□□□ 0.74
TM6SF2-204ENST00000590431 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
TM6SF2-204ENST00000590431 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
TM6SF2-204ENST00000590431 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
TM6SF2-204ENST00000590431 CHD1O14646 1710 aa19.59■□□□□ 0.73
TM6SF2-204ENST00000590431 SOGA1O94964 1423 aa19.58■□□□□ 0.72
TM6SF2-204ENST00000590431 CUX1P39880 1505 aa19.57■□□□□ 0.72
TM6SF2-204ENST00000590431 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
TM6SF2-204ENST00000590431 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
TM6SF2-204ENST00000590431 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
TM6SF2-204ENST00000590431 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
TM6SF2-204ENST00000590431 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
TM6SF2-204ENST00000590431 FBLN2P98095 1184 aa19.51■□□□□ 0.71
TM6SF2-204ENST00000590431 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
TM6SF2-204ENST00000590431 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
TM6SF2-204ENST00000590431 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
TM6SF2-204ENST00000590431 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
TM6SF2-204ENST00000590431 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
TM6SF2-204ENST00000590431 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
TM6SF2-204ENST00000590431 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
TM6SF2-204ENST00000590431 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
TM6SF2-204ENST00000590431 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
TM6SF2-204ENST00000590431 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
TM6SF2-204ENST00000590431 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
TM6SF2-204ENST00000590431 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
TM6SF2-204ENST00000590431 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
TM6SF2-204ENST00000590431 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
TM6SF2-204ENST00000590431 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
TM6SF2-204ENST00000590431 CLASP1Q7Z460 1538 aa19.27■□□□□ 0.68
TM6SF2-204ENST00000590431 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
TM6SF2-204ENST00000590431 WRNQ14191 1432 aaPredicted RBP eCLIP19.26■□□□□ 0.67
TM6SF2-204ENST00000590431 ADAMTS12P58397 1594 aa19.14■□□□□ 0.65
TM6SF2-204ENST00000590431 GRIN2AQ12879 1464 aa19.11■□□□□ 0.65
TM6SF2-204ENST00000590431 TRHP20396 242 aaPredicted RBP19.09■□□□□ 0.65
TM6SF2-204ENST00000590431 CEP170Q5SW79 1584 aa19.08■□□□□ 0.65
TM6SF2-204ENST00000590431 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
TM6SF2-204ENST00000590431 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
TM6SF2-204ENST00000590431 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
TM6SF2-204ENST00000590431 NUP160Q12769 1436 aa19.02■□□□□ 0.64
TM6SF2-204ENST00000590431 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
TM6SF2-204ENST00000590431 JPH4Q96JJ6 628 aa18.88■□□□□ 0.61
TM6SF2-204ENST00000590431 IGF1RP08069 1367 aa18.88■□□□□ 0.61
TM6SF2-204ENST00000590431 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
TM6SF2-204ENST00000590431 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms