RNA–Protein interactions for RNA: ENST00000590425.1

KRT13-209, Transcript of keratin 13, humanhuman

TSL 4

Gene KRT13, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13-209ENST00000590425 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
KRT13-209ENST00000590425 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
KRT13-209ENST00000590425 ABCC9O60706 1549 aa32.09■■■□□ 2.73
KRT13-209ENST00000590425 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
KRT13-209ENST00000590425 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
KRT13-209ENST00000590425 NACADO15069 1562 aa30.62■■■□□ 2.49
KRT13-209ENST00000590425 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
KRT13-209ENST00000590425 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
KRT13-209ENST00000590425 DCAF1Q9Y4B6 1507 aa30.2■■■□□ 2.42
KRT13-209ENST00000590425 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.4
KRT13-209ENST00000590425 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
KRT13-209ENST00000590425 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
KRT13-209ENST00000590425 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
KRT13-209ENST00000590425 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
KRT13-209ENST00000590425 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
KRT13-209ENST00000590425 EIF4G1Q04637 1599 aaKnown RBP29.04■■■□□ 2.24
KRT13-209ENST00000590425 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
KRT13-209ENST00000590425 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
KRT13-209ENST00000590425 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
KRT13-209ENST00000590425 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
KRT13-209ENST00000590425 ATAD2BQ9ULI0 1458 aa28.33■■■□□ 2.13
KRT13-209ENST00000590425 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
KRT13-209ENST00000590425 MROH2BQ7Z745 1585 aa28.19■■■□□ 2.1
KRT13-209ENST00000590425 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
KRT13-209ENST00000590425 PEG3Q9GZU2 1588 aa28.1■■■□□ 2.09
KRT13-209ENST00000590425 HMGXB3Q12766 1538 aa28.08■■■□□ 2.09
KRT13-209ENST00000590425 BAZ1BQ9UIG0 1483 aaKnown RBP27.99■■■□□ 2.07
KRT13-209ENST00000590425 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
KRT13-209ENST00000590425 WIZO95785 1651 aa27.81■■■□□ 2.04
KRT13-209ENST00000590425 NESP48681 1621 aa27.74■■■□□ 2.03
KRT13-209ENST00000590425 ERCC6Q03468 1493 aa27.58■■■□□ 2.01
KRT13-209ENST00000590425 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
KRT13-209ENST00000590425 CADPSQ9ULU8 1353 aa27.52■■■□□ 2
KRT13-209ENST00000590425 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
KRT13-209ENST00000590425 CUX2O14529 1486 aa27.41■■□□□ 1.98
KRT13-209ENST00000590425 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
KRT13-209ENST00000590425 CFTRP13569 1480 aa27.29■■□□□ 1.96
KRT13-209ENST00000590425 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
KRT13-209ENST00000590425 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.96
KRT13-209ENST00000590425 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
KRT13-209ENST00000590425 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.94
KRT13-209ENST00000590425 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
KRT13-209ENST00000590425 CEP164Q9UPV0 1460 aa27.08■■□□□ 1.93
KRT13-209ENST00000590425 WDR62O43379 1518 aa27.03■■□□□ 1.92
KRT13-209ENST00000590425 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
KRT13-209ENST00000590425 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
KRT13-209ENST00000590425 URB2Q14146 1524 aaKnown RBP26.92■■□□□ 1.9
KRT13-209ENST00000590425 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
KRT13-209ENST00000590425 TOPBP1Q92547 1522 aa26.7■■□□□ 1.86
KRT13-209ENST00000590425 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
KRT13-209ENST00000590425 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
KRT13-209ENST00000590425 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
KRT13-209ENST00000590425 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
KRT13-209ENST00000590425 POLA1P09884 1462 aaPredicted RBP26.46■■□□□ 1.83
KRT13-209ENST00000590425 CUX1P39880 1505 aa26.43■■□□□ 1.82
KRT13-209ENST00000590425 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
KRT13-209ENST00000590425 RAD54L2Q9Y4B4 1467 aa26.4■■□□□ 1.82
KRT13-209ENST00000590425 SOGA1O94964 1423 aa26.38■■□□□ 1.81
KRT13-209ENST00000590425 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
KRT13-209ENST00000590425 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
KRT13-209ENST00000590425 OSCARQ8IYS5 282 aa26.33■■□□□ 1.81
KRT13-209ENST00000590425 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
KRT13-209ENST00000590425 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
KRT13-209ENST00000590425 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
KRT13-209ENST00000590425 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
KRT13-209ENST00000590425 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
KRT13-209ENST00000590425 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
KRT13-209ENST00000590425 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
KRT13-209ENST00000590425 BIVM-ERCC5R4GMW8 1640 aa26.06■■□□□ 1.76
KRT13-209ENST00000590425 FBLN2P98095 1184 aa26.05■■□□□ 1.76
KRT13-209ENST00000590425 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
KRT13-209ENST00000590425 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
KRT13-209ENST00000590425 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
KRT13-209ENST00000590425 MAGI1Q96QZ7 1491 aaPredicted RBP25.97■■□□□ 1.75
KRT13-209ENST00000590425 CHD1O14646 1710 aa25.97■■□□□ 1.75
KRT13-209ENST00000590425 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
KRT13-209ENST00000590425 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
KRT13-209ENST00000590425 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
KRT13-209ENST00000590425 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
KRT13-209ENST00000590425 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
KRT13-209ENST00000590425 RIMBP3CA6NJZ7 1639 aa25.84■■□□□ 1.73
KRT13-209ENST00000590425 RIMBP3BA6NNM3 1639 aa25.84■■□□□ 1.73
KRT13-209ENST00000590425 RIMBP3Q9UFD9 1639 aa25.84■■□□□ 1.73
KRT13-209ENST00000590425 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
KRT13-209ENST00000590425 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
KRT13-209ENST00000590425 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
KRT13-209ENST00000590425 FHAD1B1AJZ9 1412 aa25.72■■□□□ 1.71
KRT13-209ENST00000590425 GRIN2AQ12879 1464 aa25.71■■□□□ 1.71
KRT13-209ENST00000590425 ADAMTS12P58397 1594 aa25.7■■□□□ 1.71
KRT13-209ENST00000590425 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
KRT13-209ENST00000590425 IGF1RP08069 1367 aa25.68■■□□□ 1.7
KRT13-209ENST00000590425 NUP160Q12769 1436 aa25.64■■□□□ 1.7
KRT13-209ENST00000590425 ARAP1Q96P48 1450 aa25.64■■□□□ 1.69
KRT13-209ENST00000590425 KIF27Q86VH2 1401 aa25.61■■□□□ 1.69
KRT13-209ENST00000590425 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
KRT13-209ENST00000590425 ERCC6L2Q5T890 1561 aa25.46■■□□□ 1.67
KRT13-209ENST00000590425 JPH4Q96JJ6 628 aa25.45■■□□□ 1.66
KRT13-209ENST00000590425 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
KRT13-209ENST00000590425 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
KRT13-209ENST00000590425 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms