RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 NISCHQ9Y2I1 1504 aa44.77■■■■■ 4.76
LDLRAD4-215ENST00000590371 CCDC180Q9P1Z9 1646 aa39.92■■■■□ 3.98
LDLRAD4-215ENST00000590371 ABCC9O60706 1549 aa39.27■■■■□ 3.88
LDLRAD4-215ENST00000590371 RB1CC1Q8TDY2 1594 aa37.69■■■■□ 3.62
LDLRAD4-215ENST00000590371 DCAF8L2P0C7V8 631 aa37.62■■■■□ 3.61
LDLRAD4-215ENST00000590371 NACADO15069 1562 aa37.57■■■■□ 3.6
LDLRAD4-215ENST00000590371 ZCCHC6Q5VYS8 1495 aaKnown RBP37.25■■■■□ 3.55
LDLRAD4-215ENST00000590371 MYO15BQ96JP2 1530 aa37.21■■■■□ 3.55
LDLRAD4-215ENST00000590371 DCAF1Q9Y4B6 1507 aa37■■■■□ 3.51
LDLRAD4-215ENST00000590371 UNC13AQ9UPW8 1703 aa36.84■■■■□ 3.49
LDLRAD4-215ENST00000590371 PABPN1Q86U42 306 aaKnown RBP eCLIP36.67■■■■□ 3.46
LDLRAD4-215ENST00000590371 BICRAQ9NZM4 1560 aa36.49■■■■□ 3.43
LDLRAD4-215ENST00000590371 SCRIBQ14160 1630 aa36.46■■■■□ 3.43
LDLRAD4-215ENST00000590371 DNAJC5BQ9UF47 199 aa36.13■■■■□ 3.37
LDLRAD4-215ENST00000590371 SHROOM4Q9ULL8 1493 aa36.1■■■■□ 3.37
LDLRAD4-215ENST00000590371 EIF4G1Q04637 1599 aaKnown RBP35.59■■■■□ 3.29
LDLRAD4-215ENST00000590371 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
LDLRAD4-215ENST00000590371 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
LDLRAD4-215ENST00000590371 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
LDLRAD4-215ENST00000590371 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
LDLRAD4-215ENST00000590371 ATAD2BQ9ULI0 1458 aa34.64■■■■□ 3.14
LDLRAD4-215ENST00000590371 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
LDLRAD4-215ENST00000590371 SMARCA2P51531 1590 aa34.62■■■■□ 3.13
LDLRAD4-215ENST00000590371 MROH2BQ7Z745 1585 aa34.51■■■■□ 3.12
LDLRAD4-215ENST00000590371 HMGXB3Q12766 1538 aa34.47■■■■□ 3.11
LDLRAD4-215ENST00000590371 PEG3Q9GZU2 1588 aa34.41■■■■□ 3.1
LDLRAD4-215ENST00000590371 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
LDLRAD4-215ENST00000590371 WIZO95785 1651 aa34.17■■■■□ 3.06
LDLRAD4-215ENST00000590371 RSF1Q96T23 1441 aaPredicted RBP34.03■■■■□ 3.04
LDLRAD4-215ENST00000590371 ERCC6Q03468 1493 aa33.91■■■■□ 3.02
LDLRAD4-215ENST00000590371 NESP48681 1621 aa33.9■■■■□ 3.02
LDLRAD4-215ENST00000590371 LAMC3Q9Y6N6 1575 aa33.8■■■■□ 3
LDLRAD4-215ENST00000590371 TOP2AP11388 1531 aaKnown RBP33.77■■■■□ 3
LDLRAD4-215ENST00000590371 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
LDLRAD4-215ENST00000590371 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
LDLRAD4-215ENST00000590371 CUX2O14529 1486 aa33.56■■■□□ 2.96
LDLRAD4-215ENST00000590371 KIF21AQ7Z4S6 1674 aa33.54■■■□□ 2.96
LDLRAD4-215ENST00000590371 THOC2Q8NI27 1593 aaKnown RBP33.43■■■□□ 2.94
LDLRAD4-215ENST00000590371 CFTRP13569 1480 aa33.38■■■□□ 2.93
LDLRAD4-215ENST00000590371 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
LDLRAD4-215ENST00000590371 FANCD2Q9BXW9 1451 aa33.28■■■□□ 2.92
LDLRAD4-215ENST00000590371 CEP164Q9UPV0 1460 aa33.28■■■□□ 2.92
LDLRAD4-215ENST00000590371 MRC2Q9UBG0 1479 aa33.25■■■□□ 2.91
LDLRAD4-215ENST00000590371 PRDM2Q13029 1718 aa33.2■■■□□ 2.91
LDLRAD4-215ENST00000590371 SUPT5HO00267 1087 aaKnown RBP33.13■■■□□ 2.89
LDLRAD4-215ENST00000590371 WDR62O43379 1518 aa33.12■■■□□ 2.89
LDLRAD4-215ENST00000590371 URB2Q14146 1524 aaKnown RBP32.93■■■□□ 2.86
LDLRAD4-215ENST00000590371 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
LDLRAD4-215ENST00000590371 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
LDLRAD4-215ENST00000590371 ABCC8Q09428 1581 aa32.71■■■□□ 2.83
LDLRAD4-215ENST00000590371 DNMBPQ6XZF7 1577 aa32.68■■■□□ 2.82
LDLRAD4-215ENST00000590371 IFT140Q96RY7 1462 aa32.56■■■□□ 2.8
LDLRAD4-215ENST00000590371 ZNF608Q9ULD9 1512 aaPredicted RBP32.42■■■□□ 2.78
LDLRAD4-215ENST00000590371 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
LDLRAD4-215ENST00000590371 CUX1P39880 1505 aa32.4■■■□□ 2.78
LDLRAD4-215ENST00000590371 TARBP1Q13395 1621 aaKnown RBP32.36■■■□□ 2.77
LDLRAD4-215ENST00000590371 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
LDLRAD4-215ENST00000590371 EIF4G3O43432 1585 aaKnown RBP32.32■■■□□ 2.76
LDLRAD4-215ENST00000590371 RAD54L2Q9Y4B4 1467 aa32.3■■■□□ 2.76
LDLRAD4-215ENST00000590371 SOGA1O94964 1423 aa32.3■■■□□ 2.76
LDLRAD4-215ENST00000590371 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.75
LDLRAD4-215ENST00000590371 OSCARQ8IYS5 282 aa32.15■■■□□ 2.74
LDLRAD4-215ENST00000590371 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
LDLRAD4-215ENST00000590371 WRNQ14191 1432 aaPredicted RBP eCLIP32.14■■■□□ 2.74
LDLRAD4-215ENST00000590371 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
LDLRAD4-215ENST00000590371 TOP2BQ02880 1626 aa32.08■■■□□ 2.73
LDLRAD4-215ENST00000590371 BIVM-ERCC5R4GMW8 1640 aa32.08■■■□□ 2.73
LDLRAD4-215ENST00000590371 SYNJ1O43426 1573 aa32.06■■■□□ 2.72
LDLRAD4-215ENST00000590371 CHD1O14646 1710 aa31.98■■■□□ 2.71
LDLRAD4-215ENST00000590371 ABCA10Q8WWZ4 1543 aa31.98■■■□□ 2.71
LDLRAD4-215ENST00000590371 FBLN2P98095 1184 aa31.97■■■□□ 2.71
LDLRAD4-215ENST00000590371 GRIN2BQ13224 1484 aa31.95■■■□□ 2.7
LDLRAD4-215ENST00000590371 SNAPC4Q5SXM2 1469 aa31.95■■■□□ 2.7
LDLRAD4-215ENST00000590371 GAPVD1Q14C86 1478 aa31.93■■■□□ 2.7
LDLRAD4-215ENST00000590371 PBRM1Q86U86 1689 aa31.92■■■□□ 2.7
LDLRAD4-215ENST00000590371 MAGI1Q96QZ7 1491 aaPredicted RBP31.88■■■□□ 2.69
LDLRAD4-215ENST00000590371 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
LDLRAD4-215ENST00000590371 CHMP7Q8WUX9 453 aaPredicted RBP31.81■■■□□ 2.68
LDLRAD4-215ENST00000590371 SYNJ2O15056 1496 aa31.76■■■□□ 2.67
LDLRAD4-215ENST00000590371 TRIM41Q8WV44 630 aa31.69■■■□□ 2.66
LDLRAD4-215ENST00000590371 RIMBP3CA6NJZ7 1639 aa31.67■■■□□ 2.66
LDLRAD4-215ENST00000590371 RIMBP3BA6NNM3 1639 aa31.67■■■□□ 2.66
LDLRAD4-215ENST00000590371 RIMBP3Q9UFD9 1639 aa31.67■■■□□ 2.66
LDLRAD4-215ENST00000590371 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
LDLRAD4-215ENST00000590371 ADAMTS12P58397 1594 aa31.61■■■□□ 2.65
LDLRAD4-215ENST00000590371 ERICH3Q5RHP9 1530 aa31.61■■■□□ 2.65
LDLRAD4-215ENST00000590371 CLASP1Q7Z460 1538 aa31.56■■■□□ 2.64
LDLRAD4-215ENST00000590371 FHAD1B1AJZ9 1412 aa31.55■■■□□ 2.64
LDLRAD4-215ENST00000590371 GRIN2AQ12879 1464 aa31.53■■■□□ 2.64
LDLRAD4-215ENST00000590371 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
LDLRAD4-215ENST00000590371 CEP170Q5SW79 1584 aa31.39■■■□□ 2.61
LDLRAD4-215ENST00000590371 CYB5RLQ6IPT4 315 aa31.37■■■□□ 2.61
LDLRAD4-215ENST00000590371 NUP160Q12769 1436 aa31.36■■■□□ 2.61
LDLRAD4-215ENST00000590371 ARAP1Q96P48 1450 aa31.34■■■□□ 2.61
LDLRAD4-215ENST00000590371 IGF1RP08069 1367 aa31.33■■■□□ 2.61
LDLRAD4-215ENST00000590371 CUL7Q14999 1698 aa31.33■■■□□ 2.61
LDLRAD4-215ENST00000590371 CARMIL1Q5VZK9 1371 aa31.18■■■□□ 2.58
LDLRAD4-215ENST00000590371 SHROOM2Q13796 1616 aa31.16■■■□□ 2.58
LDLRAD4-215ENST00000590371 RUSC2Q8N2Y8 1516 aa31.14■■■□□ 2.58
LDLRAD4-215ENST00000590371 ERCC6L2Q5T890 1561 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms