RNA–Protein interactions for RNA: ENST00000590258.2

TPGS2-210, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 2,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-210ENST00000590258 NISCHQ9Y2I1 1504 aa22.77■■□□□ 1.24
TPGS2-210ENST00000590258 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
TPGS2-210ENST00000590258 ABCC9O60706 1549 aa19.19■□□□□ 0.66
TPGS2-210ENST00000590258 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
TPGS2-210ENST00000590258 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
TPGS2-210ENST00000590258 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
TPGS2-210ENST00000590258 NACADO15069 1562 aa18.83■□□□□ 0.6
TPGS2-210ENST00000590258 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
TPGS2-210ENST00000590258 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
TPGS2-210ENST00000590258 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
TPGS2-210ENST00000590258 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
TPGS2-210ENST00000590258 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
TPGS2-210ENST00000590258 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
TPGS2-210ENST00000590258 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
TPGS2-210ENST00000590258 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
TPGS2-210ENST00000590258 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
TPGS2-210ENST00000590258 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
TPGS2-210ENST00000590258 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
TPGS2-210ENST00000590258 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
TPGS2-210ENST00000590258 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
TPGS2-210ENST00000590258 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
TPGS2-210ENST00000590258 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
TPGS2-210ENST00000590258 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
TPGS2-210ENST00000590258 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.38
TPGS2-210ENST00000590258 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
TPGS2-210ENST00000590258 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
TPGS2-210ENST00000590258 WIZO95785 1651 aa17.31■□□□□ 0.36
TPGS2-210ENST00000590258 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
TPGS2-210ENST00000590258 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
TPGS2-210ENST00000590258 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
TPGS2-210ENST00000590258 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
TPGS2-210ENST00000590258 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
TPGS2-210ENST00000590258 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
TPGS2-210ENST00000590258 CFTRP13569 1480 aa16.85■□□□□ 0.29
TPGS2-210ENST00000590258 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
TPGS2-210ENST00000590258 NESP48681 1621 aa16.71■□□□□ 0.27
TPGS2-210ENST00000590258 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
TPGS2-210ENST00000590258 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
TPGS2-210ENST00000590258 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
TPGS2-210ENST00000590258 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
TPGS2-210ENST00000590258 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
TPGS2-210ENST00000590258 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
TPGS2-210ENST00000590258 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
TPGS2-210ENST00000590258 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
TPGS2-210ENST00000590258 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
TPGS2-210ENST00000590258 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
TPGS2-210ENST00000590258 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
TPGS2-210ENST00000590258 WDR62O43379 1518 aa16.44■□□□□ 0.22
TPGS2-210ENST00000590258 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
TPGS2-210ENST00000590258 CUX1P39880 1505 aa16.42■□□□□ 0.22
TPGS2-210ENST00000590258 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
TPGS2-210ENST00000590258 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
TPGS2-210ENST00000590258 BIVM-ERCC5R4GMW8 1640 aa16.4■□□□□ 0.22
TPGS2-210ENST00000590258 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
TPGS2-210ENST00000590258 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
TPGS2-210ENST00000590258 CUX2O14529 1486 aa16.32■□□□□ 0.2
TPGS2-210ENST00000590258 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
TPGS2-210ENST00000590258 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
TPGS2-210ENST00000590258 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
TPGS2-210ENST00000590258 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
TPGS2-210ENST00000590258 SOGA1O94964 1423 aa16.24■□□□□ 0.19
TPGS2-210ENST00000590258 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
TPGS2-210ENST00000590258 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
TPGS2-210ENST00000590258 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
TPGS2-210ENST00000590258 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
TPGS2-210ENST00000590258 EEA1Q15075 1411 aa16.12■□□□□ 0.17
TPGS2-210ENST00000590258 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
TPGS2-210ENST00000590258 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
TPGS2-210ENST00000590258 ZNF608Q9ULD9 1512 aaPredicted RBP16.06■□□□□ 0.16
TPGS2-210ENST00000590258 GAPVD1Q14C86 1478 aa16.06■□□□□ 0.16
TPGS2-210ENST00000590258 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
TPGS2-210ENST00000590258 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
TPGS2-210ENST00000590258 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
TPGS2-210ENST00000590258 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
TPGS2-210ENST00000590258 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
TPGS2-210ENST00000590258 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
TPGS2-210ENST00000590258 IGF1RP08069 1367 aa15.99■□□□□ 0.15
TPGS2-210ENST00000590258 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
TPGS2-210ENST00000590258 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
TPGS2-210ENST00000590258 CUL7Q14999 1698 aa15.95■□□□□ 0.14
TPGS2-210ENST00000590258 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
TPGS2-210ENST00000590258 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
TPGS2-210ENST00000590258 FHAD1B1AJZ9 1412 aa15.92■□□□□ 0.14
TPGS2-210ENST00000590258 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
TPGS2-210ENST00000590258 ADAMTS12P58397 1594 aa15.91■□□□□ 0.14
TPGS2-210ENST00000590258 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
TPGS2-210ENST00000590258 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
TPGS2-210ENST00000590258 KIF21BO75037 1637 aa15.87■□□□□ 0.13
TPGS2-210ENST00000590258 RAPGEF2Q9Y4G8 1499 aa15.86■□□□□ 0.13
TPGS2-210ENST00000590258 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
TPGS2-210ENST00000590258 GRIN2AQ12879 1464 aa15.8■□□□□ 0.12
TPGS2-210ENST00000590258 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
TPGS2-210ENST00000590258 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
TPGS2-210ENST00000590258 NUP160Q12769 1436 aa15.75■□□□□ 0.11
TPGS2-210ENST00000590258 CHD1O14646 1710 aa15.72■□□□□ 0.11
TPGS2-210ENST00000590258 FBLN2P98095 1184 aa15.7■□□□□ 0.1
TPGS2-210ENST00000590258 KIAA0586Q9BVV6 1533 aa15.69■□□□□ 0.1
TPGS2-210ENST00000590258 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
TPGS2-210ENST00000590258 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
TPGS2-210ENST00000590258 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms