RNA–Protein interactions for RNA: ENST00000590244.1

APPBP2-205, Transcript of amyloid beta precursor protein binding protein 2, humanhuman

TSL 3

Gene APPBP2, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPBP2-205ENST00000590244 NISCHQ9Y2I1 1504 aa47.21■■■■■ 5.15
APPBP2-205ENST00000590244 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
APPBP2-205ENST00000590244 ABCC9O60706 1549 aa41.6■■■■■ 4.25
APPBP2-205ENST00000590244 RB1CC1Q8TDY2 1594 aa39.8■■■■□ 3.96
APPBP2-205ENST00000590244 DCAF8L2P0C7V8 631 aa39.67■■■■□ 3.94
APPBP2-205ENST00000590244 NACADO15069 1562 aa39.67■■■■□ 3.94
APPBP2-205ENST00000590244 MYO15BQ96JP2 1530 aa39.28■■■■□ 3.88
APPBP2-205ENST00000590244 ZCCHC6Q5VYS8 1495 aaKnown RBP39.24■■■■□ 3.87
APPBP2-205ENST00000590244 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
APPBP2-205ENST00000590244 UNC13AQ9UPW8 1703 aa38.94■■■■□ 3.82
APPBP2-205ENST00000590244 PABPN1Q86U42 306 aaKnown RBP eCLIP38.85■■■■□ 3.81
APPBP2-205ENST00000590244 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
APPBP2-205ENST00000590244 DNAJC5BQ9UF47 199 aa38.54■■■■□ 3.76
APPBP2-205ENST00000590244 SCRIBQ14160 1630 aa38.45■■■■□ 3.75
APPBP2-205ENST00000590244 SHROOM4Q9ULL8 1493 aa38.11■■■■□ 3.69
APPBP2-205ENST00000590244 EIF4G1Q04637 1599 aaKnown RBP37.65■■■■□ 3.62
APPBP2-205ENST00000590244 CC2D2AQ9P2K1 1620 aa37.59■■■■□ 3.61
APPBP2-205ENST00000590244 CECR2Q9BXF3 1484 aa37.39■■■■□ 3.58
APPBP2-205ENST00000590244 SMARCA4P51532 1647 aa36.71■■■■□ 3.47
APPBP2-205ENST00000590244 NCAPD3P42695 1498 aa36.62■■■■□ 3.45
APPBP2-205ENST00000590244 ATAD2BQ9ULI0 1458 aa36.61■■■■□ 3.45
APPBP2-205ENST00000590244 BAZ1AQ9NRL2 1556 aaPredicted RBP36.6■■■■□ 3.45
APPBP2-205ENST00000590244 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
APPBP2-205ENST00000590244 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
APPBP2-205ENST00000590244 HMGXB3Q12766 1538 aa36.39■■■■□ 3.42
APPBP2-205ENST00000590244 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.41
APPBP2-205ENST00000590244 BAZ1BQ9UIG0 1483 aaKnown RBP36.28■■■■□ 3.4
APPBP2-205ENST00000590244 WIZO95785 1651 aa36■■■■□ 3.35
APPBP2-205ENST00000590244 NESP48681 1621 aa35.91■■■■□ 3.34
APPBP2-205ENST00000590244 RSF1Q96T23 1441 aaPredicted RBP35.86■■■■□ 3.33
APPBP2-205ENST00000590244 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
APPBP2-205ENST00000590244 LAMC3Q9Y6N6 1575 aa35.69■■■■□ 3.3
APPBP2-205ENST00000590244 CUX2O14529 1486 aa35.57■■■■□ 3.28
APPBP2-205ENST00000590244 TOP2AP11388 1531 aaKnown RBP35.57■■■■□ 3.28
APPBP2-205ENST00000590244 CADPSQ9ULU8 1353 aa35.54■■■■□ 3.28
APPBP2-205ENST00000590244 PDS5BQ9NTI5 1447 aa35.48■■■■□ 3.27
APPBP2-205ENST00000590244 KIF21AQ7Z4S6 1674 aa35.46■■■■□ 3.27
APPBP2-205ENST00000590244 THOC2Q8NI27 1593 aaKnown RBP35.4■■■■□ 3.26
APPBP2-205ENST00000590244 CFTRP13569 1480 aa35.25■■■■□ 3.23
APPBP2-205ENST00000590244 CCDC88BA6NC98 1476 aa35.18■■■■□ 3.22
APPBP2-205ENST00000590244 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
APPBP2-205ENST00000590244 FANCD2Q9BXW9 1451 aa35.15■■■■□ 3.22
APPBP2-205ENST00000590244 CEP164Q9UPV0 1460 aa35.12■■■■□ 3.21
APPBP2-205ENST00000590244 WDR62O43379 1518 aa35.04■■■■□ 3.2
APPBP2-205ENST00000590244 PRDM2Q13029 1718 aa34.95■■■■□ 3.18
APPBP2-205ENST00000590244 DNAJC5Q9H3Z4 198 aa34.94■■■■□ 3.18
APPBP2-205ENST00000590244 URB2Q14146 1524 aaKnown RBP34.83■■■■□ 3.17
APPBP2-205ENST00000590244 SUPT5HO00267 1087 aaKnown RBP34.73■■■■□ 3.15
APPBP2-205ENST00000590244 TOPBP1Q92547 1522 aa34.55■■■■□ 3.12
APPBP2-205ENST00000590244 ABCC8Q09428 1581 aa34.47■■■■□ 3.11
APPBP2-205ENST00000590244 DNMBPQ6XZF7 1577 aa34.46■■■■□ 3.11
APPBP2-205ENST00000590244 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
APPBP2-205ENST00000590244 ZNF608Q9ULD9 1512 aaPredicted RBP34.32■■■■□ 3.08
APPBP2-205ENST00000590244 POLA1P09884 1462 aaPredicted RBP34.23■■■■□ 3.07
APPBP2-205ENST00000590244 TARBP1Q13395 1621 aaKnown RBP34.2■■■■□ 3.07
APPBP2-205ENST00000590244 CUX1P39880 1505 aa34.18■■■■□ 3.06
APPBP2-205ENST00000590244 EIF4G3O43432 1585 aaKnown RBP34.14■■■■□ 3.06
APPBP2-205ENST00000590244 RAD54L2Q9Y4B4 1467 aa34.12■■■■□ 3.05
APPBP2-205ENST00000590244 FGD5Q6ZNL6 1462 aa34.11■■■■□ 3.05
APPBP2-205ENST00000590244 SOGA1O94964 1423 aa34.09■■■■□ 3.05
APPBP2-205ENST00000590244 AQRO60306 1485 aaKnown RBP eCLIP34.08■■■■□ 3.057e-6■■□□□ 13.1
APPBP2-205ENST00000590244 OSCARQ8IYS5 282 aa34.07■■■■□ 3.04
APPBP2-205ENST00000590244 TDRD9Q8NDG6 1382 aaKnown RBP33.97■■■■□ 3.03
APPBP2-205ENST00000590244 WDR97A6NE52 1622 aa33.84■■■■□ 3.01
APPBP2-205ENST00000590244 WRNQ14191 1432 aaPredicted RBP eCLIP33.8■■■■□ 3
APPBP2-205ENST00000590244 CHD1O14646 1710 aa33.79■■■■□ 3
APPBP2-205ENST00000590244 SYNJ1O43426 1573 aa33.77■■■■□ 3
APPBP2-205ENST00000590244 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
APPBP2-205ENST00000590244 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
APPBP2-205ENST00000590244 FBLN2P98095 1184 aa33.75■■■□□ 2.99
APPBP2-205ENST00000590244 SNAPC4Q5SXM2 1469 aa33.74■■■□□ 2.99
APPBP2-205ENST00000590244 ABCA10Q8WWZ4 1543 aa33.73■■■□□ 2.99
APPBP2-205ENST00000590244 GRIN2BQ13224 1484 aa33.71■■■□□ 2.99
APPBP2-205ENST00000590244 TRIM41Q8WV44 630 aa33.69■■■□□ 2.98
APPBP2-205ENST00000590244 GAPVD1Q14C86 1478 aa33.69■■■□□ 2.98
APPBP2-205ENST00000590244 MAGI1Q96QZ7 1491 aaPredicted RBP33.64■■■□□ 2.98
APPBP2-205ENST00000590244 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
APPBP2-205ENST00000590244 ABCA5Q8WWZ7 1642 aa33.64■■■□□ 2.98
APPBP2-205ENST00000590244 CHMP7Q8WUX9 453 aaPredicted RBP33.58■■■□□ 2.97
APPBP2-205ENST00000590244 RIMBP3CA6NJZ7 1639 aa33.57■■■□□ 2.97
APPBP2-205ENST00000590244 RIMBP3BA6NNM3 1639 aa33.57■■■□□ 2.97
APPBP2-205ENST00000590244 RIMBP3Q9UFD9 1639 aa33.57■■■□□ 2.97
APPBP2-205ENST00000590244 SYNJ2O15056 1496 aa33.54■■■□□ 2.96
APPBP2-205ENST00000590244 ARHGEF11O15085 1522 aa33.52■■■□□ 2.96
APPBP2-205ENST00000590244 CLASP1Q7Z460 1538 aa33.4■■■□□ 2.94
APPBP2-205ENST00000590244 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
APPBP2-205ENST00000590244 ERICH3Q5RHP9 1530 aa33.32■■■□□ 2.92
APPBP2-205ENST00000590244 GRIN2AQ12879 1464 aa33.29■■■□□ 2.92
APPBP2-205ENST00000590244 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
APPBP2-205ENST00000590244 CYB5RLQ6IPT4 315 aa33.26■■■□□ 2.91
APPBP2-205ENST00000590244 ARAP1Q96P48 1450 aa33.24■■■□□ 2.91
APPBP2-205ENST00000590244 CEP170Q5SW79 1584 aa33.16■■■□□ 2.9
APPBP2-205ENST00000590244 NUP160Q12769 1436 aa33.15■■■□□ 2.9
APPBP2-205ENST00000590244 KIF27Q86VH2 1401 aa33.12■■■□□ 2.89
APPBP2-205ENST00000590244 IGF1RP08069 1367 aa33.05■■■□□ 2.88
APPBP2-205ENST00000590244 ERCC6L2Q5T890 1561 aa32.96■■■□□ 2.87
APPBP2-205ENST00000590244 CUL7Q14999 1698 aa32.94■■■□□ 2.86
APPBP2-205ENST00000590244 SHROOM2Q13796 1616 aa32.94■■■□□ 2.86
APPBP2-205ENST00000590244 RUSC2Q8N2Y8 1516 aa32.86■■■□□ 2.85
APPBP2-205ENST00000590244 CARMIL1Q5VZK9 1371 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms