RNA–Protein interactions for RNA: ENST00000590185.1

BECN1-214, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-214ENST00000590185 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
BECN1-214ENST00000590185 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
BECN1-214ENST00000590185 ABCC9O60706 1549 aa24.27■■□□□ 1.48
BECN1-214ENST00000590185 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
BECN1-214ENST00000590185 NACADO15069 1562 aa23.4■■□□□ 1.34
BECN1-214ENST00000590185 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
BECN1-214ENST00000590185 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
BECN1-214ENST00000590185 DCAF8L2P0C7V8 631 aa23.26■■□□□ 1.31
BECN1-214ENST00000590185 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
BECN1-214ENST00000590185 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
BECN1-214ENST00000590185 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
BECN1-214ENST00000590185 BICRAQ9NZM4 1560 aa22.65■■□□□ 1.22
BECN1-214ENST00000590185 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
BECN1-214ENST00000590185 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
BECN1-214ENST00000590185 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
BECN1-214ENST00000590185 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
BECN1-214ENST00000590185 CC2D2AQ9P2K1 1620 aa21.99■■□□□ 1.11
BECN1-214ENST00000590185 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.08
BECN1-214ENST00000590185 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
BECN1-214ENST00000590185 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
BECN1-214ENST00000590185 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
BECN1-214ENST00000590185 ATAD2BQ9ULI0 1458 aa21.55■■□□□ 1.04
BECN1-214ENST00000590185 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
BECN1-214ENST00000590185 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
BECN1-214ENST00000590185 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
BECN1-214ENST00000590185 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
BECN1-214ENST00000590185 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
BECN1-214ENST00000590185 WIZO95785 1651 aa21.32■■□□□ 1
BECN1-214ENST00000590185 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
BECN1-214ENST00000590185 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
BECN1-214ENST00000590185 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
BECN1-214ENST00000590185 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
BECN1-214ENST00000590185 NESP48681 1621 aa20.98■□□□□ 0.95
BECN1-214ENST00000590185 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
BECN1-214ENST00000590185 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
BECN1-214ENST00000590185 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
BECN1-214ENST00000590185 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
BECN1-214ENST00000590185 CFTRP13569 1480 aa20.8■□□□□ 0.92
BECN1-214ENST00000590185 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
BECN1-214ENST00000590185 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
BECN1-214ENST00000590185 CUX2O14529 1486 aa20.75■□□□□ 0.91
BECN1-214ENST00000590185 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
BECN1-214ENST00000590185 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
BECN1-214ENST00000590185 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
BECN1-214ENST00000590185 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
BECN1-214ENST00000590185 WDR62O43379 1518 aa20.59■□□□□ 0.89
BECN1-214ENST00000590185 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
BECN1-214ENST00000590185 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
BECN1-214ENST00000590185 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
BECN1-214ENST00000590185 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
BECN1-214ENST00000590185 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
BECN1-214ENST00000590185 CUX1P39880 1505 aa20.21■□□□□ 0.83
BECN1-214ENST00000590185 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
BECN1-214ENST00000590185 FGD5Q6ZNL6 1462 aa20.15■□□□□ 0.82
BECN1-214ENST00000590185 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
BECN1-214ENST00000590185 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
BECN1-214ENST00000590185 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
BECN1-214ENST00000590185 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
BECN1-214ENST00000590185 ZNF608Q9ULD9 1512 aaPredicted RBP20.09■□□□□ 0.81
BECN1-214ENST00000590185 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
BECN1-214ENST00000590185 WDR97A6NE52 1622 aa20.08■□□□□ 0.8
BECN1-214ENST00000590185 SOGA1O94964 1423 aa20.08■□□□□ 0.8
BECN1-214ENST00000590185 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
BECN1-214ENST00000590185 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
BECN1-214ENST00000590185 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.79
BECN1-214ENST00000590185 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
BECN1-214ENST00000590185 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
BECN1-214ENST00000590185 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
BECN1-214ENST00000590185 ABCA5Q8WWZ7 1642 aa19.92■□□□□ 0.78
BECN1-214ENST00000590185 PBRM1Q86U86 1689 aa19.92■□□□□ 0.78
BECN1-214ENST00000590185 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
BECN1-214ENST00000590185 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
BECN1-214ENST00000590185 CHD1O14646 1710 aa19.87■□□□□ 0.77
BECN1-214ENST00000590185 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
BECN1-214ENST00000590185 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
BECN1-214ENST00000590185 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
BECN1-214ENST00000590185 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
BECN1-214ENST00000590185 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
BECN1-214ENST00000590185 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
BECN1-214ENST00000590185 FBLN2P98095 1184 aa19.73■□□□□ 0.75
BECN1-214ENST00000590185 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
BECN1-214ENST00000590185 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
BECN1-214ENST00000590185 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
BECN1-214ENST00000590185 CUL7Q14999 1698 aa19.63■□□□□ 0.73
BECN1-214ENST00000590185 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
BECN1-214ENST00000590185 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
BECN1-214ENST00000590185 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
BECN1-214ENST00000590185 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
BECN1-214ENST00000590185 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
BECN1-214ENST00000590185 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
BECN1-214ENST00000590185 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
BECN1-214ENST00000590185 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
BECN1-214ENST00000590185 NUP160Q12769 1436 aa19.52■□□□□ 0.72
BECN1-214ENST00000590185 IGF1RP08069 1367 aa19.52■□□□□ 0.72
BECN1-214ENST00000590185 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
BECN1-214ENST00000590185 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
BECN1-214ENST00000590185 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
BECN1-214ENST00000590185 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
BECN1-214ENST00000590185 RAPGEF2Q9Y4G8 1499 aa19.37■□□□□ 0.69
BECN1-214ENST00000590185 EEA1Q15075 1411 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms