RNA–Protein interactions for RNA: ENST00000590166.1

HKR1-215, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 2

Gene HKR1, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-215ENST00000590166 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
HKR1-215ENST00000590166 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
HKR1-215ENST00000590166 ABCC9O60706 1549 aa17.52■□□□□ 0.39
HKR1-215ENST00000590166 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
HKR1-215ENST00000590166 NACADO15069 1562 aa16.71■□□□□ 0.27
HKR1-215ENST00000590166 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
HKR1-215ENST00000590166 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
HKR1-215ENST00000590166 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
HKR1-215ENST00000590166 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
HKR1-215ENST00000590166 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
HKR1-215ENST00000590166 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
HKR1-215ENST00000590166 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
HKR1-215ENST00000590166 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
HKR1-215ENST00000590166 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
HKR1-215ENST00000590166 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
HKR1-215ENST00000590166 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
HKR1-215ENST00000590166 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
HKR1-215ENST00000590166 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
HKR1-215ENST00000590166 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
HKR1-215ENST00000590166 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
HKR1-215ENST00000590166 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
HKR1-215ENST00000590166 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
HKR1-215ENST00000590166 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
HKR1-215ENST00000590166 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
HKR1-215ENST00000590166 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
HKR1-215ENST00000590166 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
HKR1-215ENST00000590166 HMGXB3Q12766 1538 aa15.34■□□□□ 0.05
HKR1-215ENST00000590166 CUX2O14529 1486 aa15.3■□□□□ 0.04
HKR1-215ENST00000590166 BAZ1BQ9UIG0 1483 aaKnown RBP15.3■□□□□ 0.04
HKR1-215ENST00000590166 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
HKR1-215ENST00000590166 WIZO95785 1651 aa15.26■□□□□ 0.03
HKR1-215ENST00000590166 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
HKR1-215ENST00000590166 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
HKR1-215ENST00000590166 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
HKR1-215ENST00000590166 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
HKR1-215ENST00000590166 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
HKR1-215ENST00000590166 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
HKR1-215ENST00000590166 NESP48681 1621 aa15.06■□□□□ 0
HKR1-215ENST00000590166 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
HKR1-215ENST00000590166 CADPSQ9ULU8 1353 aa14.91□□□□□ -0.02
HKR1-215ENST00000590166 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
HKR1-215ENST00000590166 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
HKR1-215ENST00000590166 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
HKR1-215ENST00000590166 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
HKR1-215ENST00000590166 WDR62O43379 1518 aa14.85□□□□□ -0.03
HKR1-215ENST00000590166 CFTRP13569 1480 aa14.84□□□□□ -0.03
HKR1-215ENST00000590166 MRC2Q9UBG0 1479 aa14.8□□□□□ -0.04
HKR1-215ENST00000590166 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.04
HKR1-215ENST00000590166 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
HKR1-215ENST00000590166 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
HKR1-215ENST00000590166 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
HKR1-215ENST00000590166 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
HKR1-215ENST00000590166 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
HKR1-215ENST00000590166 CUX1P39880 1505 aa14.46□□□□□ -0.1
HKR1-215ENST00000590166 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
HKR1-215ENST00000590166 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
HKR1-215ENST00000590166 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
HKR1-215ENST00000590166 FGD5Q6ZNL6 1462 aa14.41□□□□□ -0.1
HKR1-215ENST00000590166 TARBP1Q13395 1621 aaKnown RBP14.4□□□□□ -0.1
HKR1-215ENST00000590166 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
HKR1-215ENST00000590166 ZNF608Q9ULD9 1512 aaPredicted RBP14.37□□□□□ -0.11
HKR1-215ENST00000590166 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
HKR1-215ENST00000590166 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
HKR1-215ENST00000590166 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
HKR1-215ENST00000590166 RIMBP3CA6NJZ7 1639 aa14.36□□□□□ -0.11
HKR1-215ENST00000590166 RIMBP3BA6NNM3 1639 aa14.36□□□□□ -0.11
HKR1-215ENST00000590166 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
HKR1-215ENST00000590166 RIMBP3Q9UFD9 1639 aa14.36□□□□□ -0.11
HKR1-215ENST00000590166 RAD54L2Q9Y4B4 1467 aa14.35□□□□□ -0.11
HKR1-215ENST00000590166 WDR97A6NE52 1622 aa14.33□□□□□ -0.11
HKR1-215ENST00000590166 SOGA1O94964 1423 aa14.33□□□□□ -0.11
HKR1-215ENST00000590166 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
HKR1-215ENST00000590166 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
HKR1-215ENST00000590166 CHD1O14646 1710 aa14.28□□□□□ -0.12
HKR1-215ENST00000590166 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
HKR1-215ENST00000590166 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
HKR1-215ENST00000590166 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
HKR1-215ENST00000590166 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
HKR1-215ENST00000590166 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
HKR1-215ENST00000590166 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
HKR1-215ENST00000590166 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
HKR1-215ENST00000590166 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
HKR1-215ENST00000590166 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
HKR1-215ENST00000590166 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
HKR1-215ENST00000590166 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
HKR1-215ENST00000590166 ADAMTS12P58397 1594 aa14.11□□□□□ -0.15
HKR1-215ENST00000590166 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
HKR1-215ENST00000590166 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
HKR1-215ENST00000590166 FBLN2P98095 1184 aa14.09□□□□□ -0.15
HKR1-215ENST00000590166 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
HKR1-215ENST00000590166 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
HKR1-215ENST00000590166 CHMP7Q8WUX9 453 aaPredicted RBP14.04□□□□□ -0.16
HKR1-215ENST00000590166 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
HKR1-215ENST00000590166 CUL7Q14999 1698 aa14.02□□□□□ -0.16
HKR1-215ENST00000590166 GRIN2AQ12879 1464 aa14.02□□□□□ -0.16
HKR1-215ENST00000590166 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
HKR1-215ENST00000590166 CEP170Q5SW79 1584 aa13.96□□□□□ -0.18
HKR1-215ENST00000590166 IGF1RP08069 1367 aa13.96□□□□□ -0.18
HKR1-215ENST00000590166 NUP160Q12769 1436 aa13.94□□□□□ -0.18
HKR1-215ENST00000590166 RUSC2Q8N2Y8 1516 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms