RNA–Protein interactions for RNA: ENST00000590163.5

ATP9B-220, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 3

Gene ATP9B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-220ENST00000590163 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
ATP9B-220ENST00000590163 CCDC180Q9P1Z9 1646 aa34.77■■■■□ 3.16
ATP9B-220ENST00000590163 ABCC9O60706 1549 aa33.83■■■■□ 3.01
ATP9B-220ENST00000590163 RB1CC1Q8TDY2 1594 aa32.66■■■□□ 2.82
ATP9B-220ENST00000590163 NACADO15069 1562 aa32.62■■■□□ 2.81
ATP9B-220ENST00000590163 ZCCHC6Q5VYS8 1495 aaKnown RBP32.55■■■□□ 2.8
ATP9B-220ENST00000590163 DCAF8L2P0C7V8 631 aa32.55■■■□□ 2.8
ATP9B-220ENST00000590163 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
ATP9B-220ENST00000590163 DCAF1Q9Y4B6 1507 aa32.33■■■□□ 2.77
ATP9B-220ENST00000590163 UNC13AQ9UPW8 1703 aa31.96■■■□□ 2.71
ATP9B-220ENST00000590163 SCRIBQ14160 1630 aa31.68■■■□□ 2.66
ATP9B-220ENST00000590163 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
ATP9B-220ENST00000590163 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
ATP9B-220ENST00000590163 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
ATP9B-220ENST00000590163 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
ATP9B-220ENST00000590163 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
ATP9B-220ENST00000590163 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
ATP9B-220ENST00000590163 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.46
ATP9B-220ENST00000590163 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
ATP9B-220ENST00000590163 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
ATP9B-220ENST00000590163 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
ATP9B-220ENST00000590163 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
ATP9B-220ENST00000590163 ATAD2BQ9ULI0 1458 aa30.07■■■□□ 2.4
ATP9B-220ENST00000590163 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
ATP9B-220ENST00000590163 PEG3Q9GZU2 1588 aa30.01■■■□□ 2.39
ATP9B-220ENST00000590163 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
ATP9B-220ENST00000590163 BAZ1BQ9UIG0 1483 aaKnown RBP29.88■■■□□ 2.37
ATP9B-220ENST00000590163 WIZO95785 1651 aa29.8■■■□□ 2.36
ATP9B-220ENST00000590163 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
ATP9B-220ENST00000590163 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
ATP9B-220ENST00000590163 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
ATP9B-220ENST00000590163 NESP48681 1621 aa29.28■■■□□ 2.28
ATP9B-220ENST00000590163 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
ATP9B-220ENST00000590163 CADPSQ9ULU8 1353 aa29.16■■■□□ 2.26
ATP9B-220ENST00000590163 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
ATP9B-220ENST00000590163 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
ATP9B-220ENST00000590163 PDS5BQ9NTI5 1447 aa29.07■■■□□ 2.24
ATP9B-220ENST00000590163 KIF21AQ7Z4S6 1674 aa29.04■■■□□ 2.24
ATP9B-220ENST00000590163 CFTRP13569 1480 aa29.03■■■□□ 2.24
ATP9B-220ENST00000590163 PRDM2Q13029 1718 aa28.98■■■□□ 2.23
ATP9B-220ENST00000590163 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
ATP9B-220ENST00000590163 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
ATP9B-220ENST00000590163 CUX2O14529 1486 aa28.85■■■□□ 2.21
ATP9B-220ENST00000590163 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
ATP9B-220ENST00000590163 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
ATP9B-220ENST00000590163 WDR62O43379 1518 aa28.68■■■□□ 2.18
ATP9B-220ENST00000590163 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
ATP9B-220ENST00000590163 ABCC8Q09428 1581 aa28.45■■■□□ 2.15
ATP9B-220ENST00000590163 DNMBPQ6XZF7 1577 aa28.42■■■□□ 2.14
ATP9B-220ENST00000590163 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
ATP9B-220ENST00000590163 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
ATP9B-220ENST00000590163 CUX1P39880 1505 aa28.22■■■□□ 2.11
ATP9B-220ENST00000590163 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
ATP9B-220ENST00000590163 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
ATP9B-220ENST00000590163 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
ATP9B-220ENST00000590163 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
ATP9B-220ENST00000590163 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
ATP9B-220ENST00000590163 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
ATP9B-220ENST00000590163 ZNF608Q9ULD9 1512 aaPredicted RBP28.04■■■□□ 2.08
ATP9B-220ENST00000590163 SOGA1O94964 1423 aa28.04■■■□□ 2.08
ATP9B-220ENST00000590163 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
ATP9B-220ENST00000590163 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
ATP9B-220ENST00000590163 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
ATP9B-220ENST00000590163 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
ATP9B-220ENST00000590163 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.06
ATP9B-220ENST00000590163 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
ATP9B-220ENST00000590163 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
ATP9B-220ENST00000590163 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
ATP9B-220ENST00000590163 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
ATP9B-220ENST00000590163 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
ATP9B-220ENST00000590163 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
ATP9B-220ENST00000590163 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
ATP9B-220ENST00000590163 CHD1O14646 1710 aa27.68■■■□□ 2.02
ATP9B-220ENST00000590163 SNAPC4Q5SXM2 1469 aa27.68■■■□□ 2.02
ATP9B-220ENST00000590163 MAGI1Q96QZ7 1491 aaPredicted RBP27.67■■■□□ 2.02
ATP9B-220ENST00000590163 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
ATP9B-220ENST00000590163 FBLN2P98095 1184 aa27.56■■■□□ 2
ATP9B-220ENST00000590163 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
ATP9B-220ENST00000590163 SYNJ2O15056 1496 aa27.54■■■□□ 2
ATP9B-220ENST00000590163 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
ATP9B-220ENST00000590163 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
ATP9B-220ENST00000590163 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
ATP9B-220ENST00000590163 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
ATP9B-220ENST00000590163 FHAD1B1AJZ9 1412 aa27.42■■□□□ 1.98
ATP9B-220ENST00000590163 CUL7Q14999 1698 aa27.38■■□□□ 1.97
ATP9B-220ENST00000590163 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
ATP9B-220ENST00000590163 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
ATP9B-220ENST00000590163 IGF1RP08069 1367 aa27.31■■□□□ 1.96
ATP9B-220ENST00000590163 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
ATP9B-220ENST00000590163 NUP160Q12769 1436 aa27.23■■□□□ 1.95
ATP9B-220ENST00000590163 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
ATP9B-220ENST00000590163 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
ATP9B-220ENST00000590163 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
ATP9B-220ENST00000590163 RUSC2Q8N2Y8 1516 aa27.22■■□□□ 1.95
ATP9B-220ENST00000590163 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
ATP9B-220ENST00000590163 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
ATP9B-220ENST00000590163 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
ATP9B-220ENST00000590163 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
ATP9B-220ENST00000590163 EEA1Q15075 1411 aa27.07■■□□□ 1.92
ATP9B-220ENST00000590163 SHROOM2Q13796 1616 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms