RNA–Protein interactions for RNA: ENST00000590038.1

KRT17-207, Transcript of keratin 17, humanhuman

TSL 5

Gene KRT17, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT17-207ENST00000590038 NISCHQ9Y2I1 1504 aa31.11■■■□□ 2.57
KRT17-207ENST00000590038 ABCC9O60706 1549 aa29.59■■■□□ 2.33
KRT17-207ENST00000590038 DNAJC5BQ9UF47 199 aa28.93■■■□□ 2.22
KRT17-207ENST00000590038 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
KRT17-207ENST00000590038 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
KRT17-207ENST00000590038 DNAJC5Q9H3Z4 198 aa27.46■■□□□ 1.99
KRT17-207ENST00000590038 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
KRT17-207ENST00000590038 NACADO15069 1562 aa27.14■■□□□ 1.94
KRT17-207ENST00000590038 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
KRT17-207ENST00000590038 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
KRT17-207ENST00000590038 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
KRT17-207ENST00000590038 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
KRT17-207ENST00000590038 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
KRT17-207ENST00000590038 MYO15BQ96JP2 1530 aa26.42■■□□□ 1.82
KRT17-207ENST00000590038 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
KRT17-207ENST00000590038 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
KRT17-207ENST00000590038 CUX2O14529 1486 aa26.01■■□□□ 1.75
KRT17-207ENST00000590038 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
KRT17-207ENST00000590038 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
KRT17-207ENST00000590038 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
KRT17-207ENST00000590038 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
KRT17-207ENST00000590038 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
KRT17-207ENST00000590038 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
KRT17-207ENST00000590038 NESP48681 1621 aa25.08■■□□□ 1.6
KRT17-207ENST00000590038 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
KRT17-207ENST00000590038 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.57
KRT17-207ENST00000590038 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
KRT17-207ENST00000590038 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
KRT17-207ENST00000590038 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
KRT17-207ENST00000590038 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
KRT17-207ENST00000590038 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
KRT17-207ENST00000590038 BAZ1AQ9NRL2 1556 aaPredicted RBP24.55■■□□□ 1.52
KRT17-207ENST00000590038 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
KRT17-207ENST00000590038 BAZ1BQ9UIG0 1483 aaKnown RBP24.53■■□□□ 1.52
KRT17-207ENST00000590038 MRC2Q9UBG0 1479 aa24.48■■□□□ 1.51
KRT17-207ENST00000590038 AEBP2Q6ZN18 517 aaPredicted RBP24.46■■□□□ 1.51
KRT17-207ENST00000590038 SMARCA4P51532 1647 aa24.44■■□□□ 1.5
KRT17-207ENST00000590038 WDR62O43379 1518 aa24.43■■□□□ 1.5
KRT17-207ENST00000590038 CADPSQ9ULU8 1353 aa24.35■■□□□ 1.49
KRT17-207ENST00000590038 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
KRT17-207ENST00000590038 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
KRT17-207ENST00000590038 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
KRT17-207ENST00000590038 TRHP20396 242 aaPredicted RBP24.28■■□□□ 1.48
KRT17-207ENST00000590038 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
KRT17-207ENST00000590038 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
KRT17-207ENST00000590038 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
KRT17-207ENST00000590038 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
KRT17-207ENST00000590038 FANCD2Q9BXW9 1451 aa24.01■■□□□ 1.43
KRT17-207ENST00000590038 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
KRT17-207ENST00000590038 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
KRT17-207ENST00000590038 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
KRT17-207ENST00000590038 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
KRT17-207ENST00000590038 CFTRP13569 1480 aa23.79■■□□□ 1.4
KRT17-207ENST00000590038 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
KRT17-207ENST00000590038 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
KRT17-207ENST00000590038 ILDR1Q86SU0 546 aaPredicted RBP23.64■■□□□ 1.37
KRT17-207ENST00000590038 FBLN2P98095 1184 aa23.55■■□□□ 1.36
KRT17-207ENST00000590038 WIZO95785 1651 aa23.51■■□□□ 1.35
KRT17-207ENST00000590038 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
KRT17-207ENST00000590038 CHD1O14646 1710 aa23.46■■□□□ 1.35
KRT17-207ENST00000590038 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
KRT17-207ENST00000590038 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
KRT17-207ENST00000590038 CLASP1Q7Z460 1538 aa23.31■■□□□ 1.32
KRT17-207ENST00000590038 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
KRT17-207ENST00000590038 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
KRT17-207ENST00000590038 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
KRT17-207ENST00000590038 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
KRT17-207ENST00000590038 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
KRT17-207ENST00000590038 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
KRT17-207ENST00000590038 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
KRT17-207ENST00000590038 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
KRT17-207ENST00000590038 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
KRT17-207ENST00000590038 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.29
KRT17-207ENST00000590038 KDM4FA0A1W2PPD8 638 aa23.13■■□□□ 1.29
KRT17-207ENST00000590038 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
KRT17-207ENST00000590038 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
KRT17-207ENST00000590038 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
KRT17-207ENST00000590038 SOGA1O94964 1423 aa23.01■■□□□ 1.27
KRT17-207ENST00000590038 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
KRT17-207ENST00000590038 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
KRT17-207ENST00000590038 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
KRT17-207ENST00000590038 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
KRT17-207ENST00000590038 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
KRT17-207ENST00000590038 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
KRT17-207ENST00000590038 FAM69CQ0P6D2 419 aa22.82■■□□□ 1.24
KRT17-207ENST00000590038 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
KRT17-207ENST00000590038 ABCC10Q5T3U5 1492 aa22.74■■□□□ 1.23
KRT17-207ENST00000590038 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
KRT17-207ENST00000590038 FBXO41Q8TF61 875 aa22.67■■□□□ 1.22
KRT17-207ENST00000590038 KDM6BO15054 1643 aa22.65■■□□□ 1.22
KRT17-207ENST00000590038 NUP160Q12769 1436 aa22.63■■□□□ 1.21
KRT17-207ENST00000590038 GRIN2AQ12879 1464 aa22.61■■□□□ 1.21
KRT17-207ENST00000590038 HECW2Q9P2P5 1572 aa22.6■■□□□ 1.21
KRT17-207ENST00000590038 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
KRT17-207ENST00000590038 ADGRL1O94910 1474 aa22.56■■□□□ 1.2
KRT17-207ENST00000590038 MAPKBP1O60336 1514 aa22.56■■□□□ 1.2
KRT17-207ENST00000590038 CUX1P39880 1505 aa22.56■■□□□ 1.2
KRT17-207ENST00000590038 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
KRT17-207ENST00000590038 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
KRT17-207ENST00000590038 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms