RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 NISCHQ9Y2I1 1504 aa37.28■■■■□ 3.56
NFIX-212ENST00000590027 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
NFIX-212ENST00000590027 ABCC9O60706 1549 aa32.9■■■□□ 2.86
NFIX-212ENST00000590027 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
NFIX-212ENST00000590027 NACADO15069 1562 aa31.37■■■□□ 2.61
NFIX-212ENST00000590027 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
NFIX-212ENST00000590027 MYO15BQ96JP2 1530 aa31.07■■■□□ 2.56
NFIX-212ENST00000590027 ZCCHC6Q5VYS8 1495 aaKnown RBP31.03■■■□□ 2.56
NFIX-212ENST00000590027 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
NFIX-212ENST00000590027 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
NFIX-212ENST00000590027 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
NFIX-212ENST00000590027 BICRAQ9NZM4 1560 aa30.6■■■□□ 2.49
NFIX-212ENST00000590027 SCRIBQ14160 1630 aa30.42■■■□□ 2.46
NFIX-212ENST00000590027 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
NFIX-212ENST00000590027 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
NFIX-212ENST00000590027 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
NFIX-212ENST00000590027 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
NFIX-212ENST00000590027 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
NFIX-212ENST00000590027 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
NFIX-212ENST00000590027 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
NFIX-212ENST00000590027 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
NFIX-212ENST00000590027 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
NFIX-212ENST00000590027 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
NFIX-212ENST00000590027 HMGXB3Q12766 1538 aa28.82■■■□□ 2.2
NFIX-212ENST00000590027 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
NFIX-212ENST00000590027 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
NFIX-212ENST00000590027 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
NFIX-212ENST00000590027 WIZO95785 1651 aa28.45■■■□□ 2.15
NFIX-212ENST00000590027 NESP48681 1621 aa28.39■■■□□ 2.13
NFIX-212ENST00000590027 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
NFIX-212ENST00000590027 LAMC3Q9Y6N6 1575 aa28.26■■■□□ 2.11
NFIX-212ENST00000590027 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
NFIX-212ENST00000590027 CUX2O14529 1486 aa28.19■■■□□ 2.1
NFIX-212ENST00000590027 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
NFIX-212ENST00000590027 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
NFIX-212ENST00000590027 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
NFIX-212ENST00000590027 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
NFIX-212ENST00000590027 PDS5BQ9NTI5 1447 aa28.02■■■□□ 2.08
NFIX-212ENST00000590027 CFTRP13569 1480 aa27.84■■■□□ 2.05
NFIX-212ENST00000590027 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
NFIX-212ENST00000590027 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
NFIX-212ENST00000590027 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
NFIX-212ENST00000590027 WDR62O43379 1518 aa27.76■■■□□ 2.03
NFIX-212ENST00000590027 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
NFIX-212ENST00000590027 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
NFIX-212ENST00000590027 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
NFIX-212ENST00000590027 URB2Q14146 1524 aaKnown RBP27.55■■■□□ 2
NFIX-212ENST00000590027 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
NFIX-212ENST00000590027 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
NFIX-212ENST00000590027 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
NFIX-212ENST00000590027 ABCC8Q09428 1581 aa27.22■■□□□ 1.95
NFIX-212ENST00000590027 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
NFIX-212ENST00000590027 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
NFIX-212ENST00000590027 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
NFIX-212ENST00000590027 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
NFIX-212ENST00000590027 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
NFIX-212ENST00000590027 CUX1P39880 1505 aa27■■□□□ 1.91
NFIX-212ENST00000590027 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
NFIX-212ENST00000590027 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
NFIX-212ENST00000590027 AQRO60306 1485 aaKnown RBP eCLIP26.89■■□□□ 1.9
NFIX-212ENST00000590027 SOGA1O94964 1423 aa26.88■■□□□ 1.89
NFIX-212ENST00000590027 OSCARQ8IYS5 282 aa26.84■■□□□ 1.89
NFIX-212ENST00000590027 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
NFIX-212ENST00000590027 CHD1O14646 1710 aa26.79■■□□□ 1.88
NFIX-212ENST00000590027 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
NFIX-212ENST00000590027 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
NFIX-212ENST00000590027 SNAPC4Q5SXM2 1469 aa26.69■■□□□ 1.86
NFIX-212ENST00000590027 SYNJ1O43426 1573 aa26.69■■□□□ 1.86
NFIX-212ENST00000590027 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
NFIX-212ENST00000590027 PBRM1Q86U86 1689 aa26.66■■□□□ 1.86
NFIX-212ENST00000590027 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
NFIX-212ENST00000590027 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
NFIX-212ENST00000590027 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
NFIX-212ENST00000590027 GRIN2BQ13224 1484 aa26.64■■□□□ 1.86
NFIX-212ENST00000590027 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
NFIX-212ENST00000590027 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
NFIX-212ENST00000590027 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
NFIX-212ENST00000590027 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
NFIX-212ENST00000590027 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
NFIX-212ENST00000590027 GAPVD1Q14C86 1478 aa26.6■■□□□ 1.85
NFIX-212ENST00000590027 FBLN2P98095 1184 aa26.58■■□□□ 1.85
NFIX-212ENST00000590027 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
NFIX-212ENST00000590027 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
NFIX-212ENST00000590027 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
NFIX-212ENST00000590027 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
NFIX-212ENST00000590027 ADAMTS12P58397 1594 aa26.42■■□□□ 1.82
NFIX-212ENST00000590027 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
NFIX-212ENST00000590027 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
NFIX-212ENST00000590027 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
NFIX-212ENST00000590027 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
NFIX-212ENST00000590027 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
NFIX-212ENST00000590027 CYB5RLQ6IPT4 315 aa26.21■■□□□ 1.79
NFIX-212ENST00000590027 NUP160Q12769 1436 aa26.21■■□□□ 1.79
NFIX-212ENST00000590027 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
NFIX-212ENST00000590027 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
NFIX-212ENST00000590027 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
NFIX-212ENST00000590027 CUL7Q14999 1698 aa26.08■■□□□ 1.77
NFIX-212ENST00000590027 RUSC2Q8N2Y8 1516 aa26.05■■□□□ 1.76
NFIX-212ENST00000590027 IGF1RP08069 1367 aa26.01■■□□□ 1.75
NFIX-212ENST00000590027 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms