RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
NEDD4L-227ENST00000590020 ABCC9O60706 1549 aa30.4■■■□□ 2.46
NEDD4L-227ENST00000590020 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
NEDD4L-227ENST00000590020 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
NEDD4L-227ENST00000590020 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
NEDD4L-227ENST00000590020 PABPN1Q86U42 306 aaKnown RBP eCLIP28.25■■■□□ 2.11
NEDD4L-227ENST00000590020 NACADO15069 1562 aa28.18■■■□□ 2.1
NEDD4L-227ENST00000590020 DCAF8L2P0C7V8 631 aa28.12■■■□□ 2.09
NEDD4L-227ENST00000590020 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
NEDD4L-227ENST00000590020 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
NEDD4L-227ENST00000590020 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
NEDD4L-227ENST00000590020 CECR2Q9BXF3 1484 aa27.4■■□□□ 1.98
NEDD4L-227ENST00000590020 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
NEDD4L-227ENST00000590020 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
NEDD4L-227ENST00000590020 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
NEDD4L-227ENST00000590020 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
NEDD4L-227ENST00000590020 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
NEDD4L-227ENST00000590020 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
NEDD4L-227ENST00000590020 DCAF1Q9Y4B6 1507 aa26.96■■□□□ 1.91
NEDD4L-227ENST00000590020 CUX2O14529 1486 aa26.32■■□□□ 1.8
NEDD4L-227ENST00000590020 ERCC6Q03468 1493 aa26.24■■□□□ 1.79
NEDD4L-227ENST00000590020 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
NEDD4L-227ENST00000590020 NESP48681 1621 aa25.96■■□□□ 1.75
NEDD4L-227ENST00000590020 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
NEDD4L-227ENST00000590020 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
NEDD4L-227ENST00000590020 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
NEDD4L-227ENST00000590020 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
NEDD4L-227ENST00000590020 THOC2Q8NI27 1593 aaKnown RBP25.75■■□□□ 1.71
NEDD4L-227ENST00000590020 TRIM41Q8WV44 630 aa25.75■■□□□ 1.71
NEDD4L-227ENST00000590020 BAZ1BQ9UIG0 1483 aaKnown RBP25.64■■□□□ 1.69
NEDD4L-227ENST00000590020 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
NEDD4L-227ENST00000590020 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.69
NEDD4L-227ENST00000590020 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
NEDD4L-227ENST00000590020 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
NEDD4L-227ENST00000590020 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
NEDD4L-227ENST00000590020 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
NEDD4L-227ENST00000590020 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
NEDD4L-227ENST00000590020 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
NEDD4L-227ENST00000590020 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
NEDD4L-227ENST00000590020 WDR62O43379 1518 aa25.22■■□□□ 1.63
NEDD4L-227ENST00000590020 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
NEDD4L-227ENST00000590020 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
NEDD4L-227ENST00000590020 WIZO95785 1651 aa25.04■■□□□ 1.6
NEDD4L-227ENST00000590020 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
NEDD4L-227ENST00000590020 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
NEDD4L-227ENST00000590020 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
NEDD4L-227ENST00000590020 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
NEDD4L-227ENST00000590020 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
NEDD4L-227ENST00000590020 CFTRP13569 1480 aa24.82■■□□□ 1.56
NEDD4L-227ENST00000590020 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
NEDD4L-227ENST00000590020 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
NEDD4L-227ENST00000590020 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
NEDD4L-227ENST00000590020 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
NEDD4L-227ENST00000590020 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
NEDD4L-227ENST00000590020 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
NEDD4L-227ENST00000590020 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
NEDD4L-227ENST00000590020 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
NEDD4L-227ENST00000590020 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
NEDD4L-227ENST00000590020 TOPBP1Q92547 1522 aa24.45■■□□□ 1.5
NEDD4L-227ENST00000590020 CHD1O14646 1710 aa24.43■■□□□ 1.5
NEDD4L-227ENST00000590020 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
NEDD4L-227ENST00000590020 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.49
NEDD4L-227ENST00000590020 FBLN2P98095 1184 aa24.37■■□□□ 1.49
NEDD4L-227ENST00000590020 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
NEDD4L-227ENST00000590020 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
NEDD4L-227ENST00000590020 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
NEDD4L-227ENST00000590020 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
NEDD4L-227ENST00000590020 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
NEDD4L-227ENST00000590020 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
NEDD4L-227ENST00000590020 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
NEDD4L-227ENST00000590020 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
NEDD4L-227ENST00000590020 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
NEDD4L-227ENST00000590020 CLASP1Q7Z460 1538 aa24.08■■□□□ 1.45
NEDD4L-227ENST00000590020 SOGA1O94964 1423 aa24.04■■□□□ 1.44
NEDD4L-227ENST00000590020 CHMP7Q8WUX9 453 aaPredicted RBP24.02■■□□□ 1.44
NEDD4L-227ENST00000590020 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
NEDD4L-227ENST00000590020 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
NEDD4L-227ENST00000590020 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
NEDD4L-227ENST00000590020 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
NEDD4L-227ENST00000590020 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
NEDD4L-227ENST00000590020 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
NEDD4L-227ENST00000590020 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
NEDD4L-227ENST00000590020 CUX1P39880 1505 aa23.84■■□□□ 1.41
NEDD4L-227ENST00000590020 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
NEDD4L-227ENST00000590020 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
NEDD4L-227ENST00000590020 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
NEDD4L-227ENST00000590020 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
NEDD4L-227ENST00000590020 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
NEDD4L-227ENST00000590020 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.36
NEDD4L-227ENST00000590020 KIF13AQ9H1H9 1805 aa23.55■■□□□ 1.36
NEDD4L-227ENST00000590020 NUP160Q12769 1436 aa23.5■■□□□ 1.35
NEDD4L-227ENST00000590020 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
NEDD4L-227ENST00000590020 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
NEDD4L-227ENST00000590020 FHAD1B1AJZ9 1412 aa23.38■■□□□ 1.33
NEDD4L-227ENST00000590020 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
NEDD4L-227ENST00000590020 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
NEDD4L-227ENST00000590020 FAM69CQ0P6D2 419 aa23.37■■□□□ 1.33
NEDD4L-227ENST00000590020 KDM4FA0A1W2PPD8 638 aa23.32■■□□□ 1.32
NEDD4L-227ENST00000590020 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
NEDD4L-227ENST00000590020 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms