RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
SAFB2-205ENST00000590000 ABCC9O60706 1549 aa32.7■■■□□ 2.83
SAFB2-205ENST00000590000 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
SAFB2-205ENST00000590000 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
SAFB2-205ENST00000590000 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
SAFB2-205ENST00000590000 NACADO15069 1562 aa30.67■■■□□ 2.5
SAFB2-205ENST00000590000 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
SAFB2-205ENST00000590000 UNC13AQ9UPW8 1703 aa30.43■■■□□ 2.46
SAFB2-205ENST00000590000 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.463e-7■■■□□ 16.7
SAFB2-205ENST00000590000 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
SAFB2-205ENST00000590000 MYO15BQ96JP2 1530 aa30.18■■■□□ 2.42
SAFB2-205ENST00000590000 ZCCHC6Q5VYS8 1495 aaKnown RBP29.91■■■□□ 2.38
SAFB2-205ENST00000590000 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.35
SAFB2-205ENST00000590000 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
SAFB2-205ENST00000590000 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
SAFB2-205ENST00000590000 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
SAFB2-205ENST00000590000 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
SAFB2-205ENST00000590000 EIF4G1Q04637 1599 aaKnown RBP29.4■■■□□ 2.3
SAFB2-205ENST00000590000 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
SAFB2-205ENST00000590000 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
SAFB2-205ENST00000590000 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
SAFB2-205ENST00000590000 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
SAFB2-205ENST00000590000 CUX2O14529 1486 aa28.14■■■□□ 2.09
SAFB2-205ENST00000590000 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
SAFB2-205ENST00000590000 NESP48681 1621 aa28.11■■■□□ 2.09
SAFB2-205ENST00000590000 SMARCA2P51531 1590 aa28.1■■■□□ 2.09
SAFB2-205ENST00000590000 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
SAFB2-205ENST00000590000 BAZ1AQ9NRL2 1556 aaPredicted RBP27.96■■■□□ 2.07
SAFB2-205ENST00000590000 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
SAFB2-205ENST00000590000 BAZ1BQ9UIG0 1483 aaKnown RBP27.93■■■□□ 2.06
SAFB2-205ENST00000590000 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
SAFB2-205ENST00000590000 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
SAFB2-205ENST00000590000 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
SAFB2-205ENST00000590000 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
SAFB2-205ENST00000590000 WIZO95785 1651 aa27.55■■■□□ 2
SAFB2-205ENST00000590000 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
SAFB2-205ENST00000590000 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
SAFB2-205ENST00000590000 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
SAFB2-205ENST00000590000 WDR62O43379 1518 aa27.34■■□□□ 1.97
SAFB2-205ENST00000590000 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
SAFB2-205ENST00000590000 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
SAFB2-205ENST00000590000 FANCD2Q9BXW9 1451 aa27.18■■□□□ 1.94
SAFB2-205ENST00000590000 CFTRP13569 1480 aa27.16■■□□□ 1.94
SAFB2-205ENST00000590000 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
SAFB2-205ENST00000590000 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
SAFB2-205ENST00000590000 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
SAFB2-205ENST00000590000 PRDM2Q13029 1718 aa26.86■■□□□ 1.89
SAFB2-205ENST00000590000 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
SAFB2-205ENST00000590000 OSCARQ8IYS5 282 aa26.78■■□□□ 1.88
SAFB2-205ENST00000590000 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
SAFB2-205ENST00000590000 TOPBP1Q92547 1522 aa26.68■■□□□ 1.86
SAFB2-205ENST00000590000 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
SAFB2-205ENST00000590000 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
SAFB2-205ENST00000590000 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
SAFB2-205ENST00000590000 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
SAFB2-205ENST00000590000 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
SAFB2-205ENST00000590000 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
SAFB2-205ENST00000590000 TARBP1Q13395 1621 aaKnown RBP26.51■■□□□ 1.83
SAFB2-205ENST00000590000 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
SAFB2-205ENST00000590000 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.832e-8■■■■□ 26.5
SAFB2-205ENST00000590000 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
SAFB2-205ENST00000590000 CHD1O14646 1710 aa26.42■■□□□ 1.82
SAFB2-205ENST00000590000 POLA1P09884 1462 aaPredicted RBP26.41■■□□□ 1.82
SAFB2-205ENST00000590000 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
SAFB2-205ENST00000590000 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
SAFB2-205ENST00000590000 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
SAFB2-205ENST00000590000 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
SAFB2-205ENST00000590000 SOGA1O94964 1423 aa26.22■■□□□ 1.79
SAFB2-205ENST00000590000 CUX1P39880 1505 aa26.21■■□□□ 1.79
SAFB2-205ENST00000590000 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
SAFB2-205ENST00000590000 FBLN2P98095 1184 aa26.18■■□□□ 1.78
SAFB2-205ENST00000590000 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
SAFB2-205ENST00000590000 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
SAFB2-205ENST00000590000 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
SAFB2-205ENST00000590000 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
SAFB2-205ENST00000590000 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
SAFB2-205ENST00000590000 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
SAFB2-205ENST00000590000 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
SAFB2-205ENST00000590000 SYNJ2O15056 1496 aa25.93■■□□□ 1.74
SAFB2-205ENST00000590000 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
SAFB2-205ENST00000590000 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
SAFB2-205ENST00000590000 ABCA5Q8WWZ7 1642 aa25.9■■□□□ 1.74
SAFB2-205ENST00000590000 GAPVD1Q14C86 1478 aa25.9■■□□□ 1.74
SAFB2-205ENST00000590000 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
SAFB2-205ENST00000590000 ERCC6L2Q5T890 1561 aa25.8■■□□□ 1.72
SAFB2-205ENST00000590000 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
SAFB2-205ENST00000590000 ADAMTS12P58397 1594 aa25.7■■□□□ 1.71
SAFB2-205ENST00000590000 GRIN2AQ12879 1464 aa25.7■■□□□ 1.7
SAFB2-205ENST00000590000 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
SAFB2-205ENST00000590000 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
SAFB2-205ENST00000590000 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
SAFB2-205ENST00000590000 NUP160Q12769 1436 aa25.65■■□□□ 1.7
SAFB2-205ENST00000590000 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
SAFB2-205ENST00000590000 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
SAFB2-205ENST00000590000 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
SAFB2-205ENST00000590000 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
SAFB2-205ENST00000590000 KIF13AQ9H1H9 1805 aa25.38■■□□□ 1.65
SAFB2-205ENST00000590000 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
SAFB2-205ENST00000590000 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
SAFB2-205ENST00000590000 JPH4Q96JJ6 628 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 217.3 ms