RNA–Protein interactions for RNA: ENST00000589999.1

AC005394.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC005394.1, Length 1,269 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005394.1-201ENST00000589999 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
AC005394.1-201ENST00000589999 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
AC005394.1-201ENST00000589999 ABCC9O60706 1549 aa20.05■□□□□ 0.8
AC005394.1-201ENST00000589999 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.77
AC005394.1-201ENST00000589999 DCAF1Q9Y4B6 1507 aa19.74■□□□□ 0.75
AC005394.1-201ENST00000589999 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
AC005394.1-201ENST00000589999 NACADO15069 1562 aa19.62■□□□□ 0.73
AC005394.1-201ENST00000589999 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
AC005394.1-201ENST00000589999 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.71
AC005394.1-201ENST00000589999 SCRIBQ14160 1630 aa19.08■□□□□ 0.65
AC005394.1-201ENST00000589999 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
AC005394.1-201ENST00000589999 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
AC005394.1-201ENST00000589999 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
AC005394.1-201ENST00000589999 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
AC005394.1-201ENST00000589999 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
AC005394.1-201ENST00000589999 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
AC005394.1-201ENST00000589999 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
AC005394.1-201ENST00000589999 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
AC005394.1-201ENST00000589999 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
AC005394.1-201ENST00000589999 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
AC005394.1-201ENST00000589999 PEG3Q9GZU2 1588 aa18.2■□□□□ 0.5
AC005394.1-201ENST00000589999 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
AC005394.1-201ENST00000589999 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
AC005394.1-201ENST00000589999 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
AC005394.1-201ENST00000589999 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
AC005394.1-201ENST00000589999 WIZO95785 1651 aa18.08■□□□□ 0.48
AC005394.1-201ENST00000589999 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
AC005394.1-201ENST00000589999 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
AC005394.1-201ENST00000589999 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
AC005394.1-201ENST00000589999 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
AC005394.1-201ENST00000589999 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
AC005394.1-201ENST00000589999 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
AC005394.1-201ENST00000589999 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
AC005394.1-201ENST00000589999 CFTRP13569 1480 aa17.57■□□□□ 0.4
AC005394.1-201ENST00000589999 LAMC3Q9Y6N6 1575 aa17.55■□□□□ 0.4
AC005394.1-201ENST00000589999 NESP48681 1621 aa17.46■□□□□ 0.39
AC005394.1-201ENST00000589999 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
AC005394.1-201ENST00000589999 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
AC005394.1-201ENST00000589999 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
AC005394.1-201ENST00000589999 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
AC005394.1-201ENST00000589999 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
AC005394.1-201ENST00000589999 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
AC005394.1-201ENST00000589999 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
AC005394.1-201ENST00000589999 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.34
AC005394.1-201ENST00000589999 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
AC005394.1-201ENST00000589999 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
AC005394.1-201ENST00000589999 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
AC005394.1-201ENST00000589999 CUX1P39880 1505 aa17.14■□□□□ 0.33
AC005394.1-201ENST00000589999 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
AC005394.1-201ENST00000589999 WDR62O43379 1518 aa17.13■□□□□ 0.33
AC005394.1-201ENST00000589999 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
AC005394.1-201ENST00000589999 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
AC005394.1-201ENST00000589999 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
AC005394.1-201ENST00000589999 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
AC005394.1-201ENST00000589999 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
AC005394.1-201ENST00000589999 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
AC005394.1-201ENST00000589999 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
AC005394.1-201ENST00000589999 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
AC005394.1-201ENST00000589999 CUX2O14529 1486 aa16.99■□□□□ 0.31
AC005394.1-201ENST00000589999 SOGA1O94964 1423 aa16.96■□□□□ 0.3
AC005394.1-201ENST00000589999 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
AC005394.1-201ENST00000589999 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
AC005394.1-201ENST00000589999 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
AC005394.1-201ENST00000589999 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
AC005394.1-201ENST00000589999 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
AC005394.1-201ENST00000589999 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
AC005394.1-201ENST00000589999 EEA1Q15075 1411 aa16.82■□□□□ 0.28
AC005394.1-201ENST00000589999 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
AC005394.1-201ENST00000589999 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
AC005394.1-201ENST00000589999 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
AC005394.1-201ENST00000589999 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
AC005394.1-201ENST00000589999 AQRO60306 1485 aaKnown RBP eCLIP16.74■□□□□ 0.272e-7■■□□□ 12
AC005394.1-201ENST00000589999 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
AC005394.1-201ENST00000589999 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
AC005394.1-201ENST00000589999 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
AC005394.1-201ENST00000589999 GRIN2BQ13224 1484 aa16.72■□□□□ 0.27
AC005394.1-201ENST00000589999 IGF1RP08069 1367 aa16.7■□□□□ 0.26
AC005394.1-201ENST00000589999 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
AC005394.1-201ENST00000589999 MAGI1Q96QZ7 1491 aaPredicted RBP16.65■□□□□ 0.26
AC005394.1-201ENST00000589999 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
AC005394.1-201ENST00000589999 CUL7Q14999 1698 aa16.63■□□□□ 0.25
AC005394.1-201ENST00000589999 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
AC005394.1-201ENST00000589999 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
AC005394.1-201ENST00000589999 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
AC005394.1-201ENST00000589999 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
AC005394.1-201ENST00000589999 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
AC005394.1-201ENST00000589999 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
AC005394.1-201ENST00000589999 KIF21BO75037 1637 aa16.56■□□□□ 0.24
AC005394.1-201ENST00000589999 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
AC005394.1-201ENST00000589999 RAPGEF2Q9Y4G8 1499 aa16.56■□□□□ 0.24
AC005394.1-201ENST00000589999 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
AC005394.1-201ENST00000589999 GOLGA3Q08378 1498 aa16.5■□□□□ 0.23
AC005394.1-201ENST00000589999 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
AC005394.1-201ENST00000589999 FBLN2P98095 1184 aa16.45■□□□□ 0.22
AC005394.1-201ENST00000589999 NUP160Q12769 1436 aa16.43■□□□□ 0.22
AC005394.1-201ENST00000589999 CHD1O14646 1710 aa16.4■□□□□ 0.22
AC005394.1-201ENST00000589999 UBTFP17480 764 aaKnown RBP16.39■□□□□ 0.21
AC005394.1-201ENST00000589999 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
AC005394.1-201ENST00000589999 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
AC005394.1-201ENST00000589999 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms