RNA–Protein interactions for RNA: ENST00000589969.1

NFIC-209, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-209ENST00000589969 NISCHQ9Y2I1 1504 aa51.27■■■■■ 5.8
NFIC-209ENST00000589969 CCDC180Q9P1Z9 1646 aa45.87■■■■■ 4.93
NFIC-209ENST00000589969 ABCC9O60706 1549 aa45.6■■■■■ 4.89
NFIC-209ENST00000589969 RB1CC1Q8TDY2 1594 aa43.58■■■■■ 4.57
NFIC-209ENST00000589969 NACADO15069 1562 aa43.37■■■■■ 4.53
NFIC-209ENST00000589969 DCAF8L2P0C7V8 631 aa43.18■■■■■ 4.5
NFIC-209ENST00000589969 MYO15BQ96JP2 1530 aa42.9■■■■■ 4.46
NFIC-209ENST00000589969 ZCCHC6Q5VYS8 1495 aaKnown RBP42.54■■■■■ 4.4
NFIC-209ENST00000589969 DNAJC5BQ9UF47 199 aa42.53■■■■■ 4.4
NFIC-209ENST00000589969 PABPN1Q86U42 306 aaKnown RBP eCLIP42.52■■■■■ 4.4
NFIC-209ENST00000589969 UNC13AQ9UPW8 1703 aa42.43■■■■■ 4.38
NFIC-209ENST00000589969 DCAF1Q9Y4B6 1507 aa42.42■■■■■ 4.38
NFIC-209ENST00000589969 BICRAQ9NZM4 1560 aa42.22■■■■■ 4.35
NFIC-209ENST00000589969 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
NFIC-209ENST00000589969 SCRIBQ14160 1630 aa41.76■■■■■ 4.28
NFIC-209ENST00000589969 EIF4G1Q04637 1599 aaKnown RBP41.2■■■■■ 4.19
NFIC-209ENST00000589969 CC2D2AQ9P2K1 1620 aa41.2■■■■■ 4.19
NFIC-209ENST00000589969 CECR2Q9BXF3 1484 aa41.09■■■■■ 4.17
NFIC-209ENST00000589969 NCAPD3P42695 1498 aa40.05■■■■■ 4
NFIC-209ENST00000589969 ATAD2BQ9ULI0 1458 aa39.92■■■■□ 3.98
NFIC-209ENST00000589969 SMARCA4P51532 1647 aa39.9■■■■□ 3.98
NFIC-209ENST00000589969 SMARCA2P51531 1590 aa39.85■■■■□ 3.97
NFIC-209ENST00000589969 BAZ1AQ9NRL2 1556 aaPredicted RBP39.8■■■■□ 3.96
NFIC-209ENST00000589969 HMGXB3Q12766 1538 aa39.74■■■■□ 3.95
NFIC-209ENST00000589969 PEG3Q9GZU2 1588 aa39.56■■■■□ 3.92
NFIC-209ENST00000589969 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
NFIC-209ENST00000589969 MROH2BQ7Z745 1585 aa39.46■■■■□ 3.91
NFIC-209ENST00000589969 ERCC6Q03468 1493 aa39.42■■■■□ 3.9
NFIC-209ENST00000589969 CUX2O14529 1486 aa39.29■■■■□ 3.88
NFIC-209ENST00000589969 NESP48681 1621 aa39.22■■■■□ 3.87
NFIC-209ENST00000589969 LAMC3Q9Y6N6 1575 aa39.07■■■■□ 3.84
NFIC-209ENST00000589969 DNAJC5Q9H3Z4 198 aa38.97■■■■□ 3.83
NFIC-209ENST00000589969 WIZO95785 1651 aa38.95■■■■□ 3.83
NFIC-209ENST00000589969 PDS5BQ9NTI5 1447 aa38.89■■■■□ 3.82
NFIC-209ENST00000589969 CADPSQ9ULU8 1353 aa38.84■■■■□ 3.81
NFIC-209ENST00000589969 RSF1Q96T23 1441 aaPredicted RBP38.79■■■■□ 3.8
NFIC-209ENST00000589969 THOC2Q8NI27 1593 aaKnown RBP38.77■■■■□ 3.8
NFIC-209ENST00000589969 KIF21AQ7Z4S6 1674 aa38.68■■■■□ 3.78
NFIC-209ENST00000589969 TOP2AP11388 1531 aaKnown RBP38.56■■■■□ 3.76
NFIC-209ENST00000589969 MRC2Q9UBG0 1479 aa38.48■■■■□ 3.75
NFIC-209ENST00000589969 CFTRP13569 1480 aa38.44■■■■□ 3.74
NFIC-209ENST00000589969 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
NFIC-209ENST00000589969 FANCD2Q9BXW9 1451 aa38.36■■■■□ 3.73
NFIC-209ENST00000589969 WDR62O43379 1518 aa38.36■■■■□ 3.73
NFIC-209ENST00000589969 CCDC88BA6NC98 1476 aa38.12■■■■□ 3.69
NFIC-209ENST00000589969 URB2Q14146 1524 aaKnown RBP37.99■■■■□ 3.67
NFIC-209ENST00000589969 PRDM2Q13029 1718 aa37.95■■■■□ 3.67
NFIC-209ENST00000589969 ABCC8Q09428 1581 aa37.69■■■■□ 3.62
NFIC-209ENST00000589969 TOPBP1Q92547 1522 aa37.65■■■■□ 3.62
NFIC-209ENST00000589969 IFT140Q96RY7 1462 aa37.64■■■■□ 3.62
NFIC-209ENST00000589969 OSCARQ8IYS5 282 aa37.57■■■■□ 3.6
NFIC-209ENST00000589969 DNMBPQ6XZF7 1577 aa37.54■■■■□ 3.6
NFIC-209ENST00000589969 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
NFIC-209ENST00000589969 TRIM41Q8WV44 630 aa37.32■■■■□ 3.56
NFIC-209ENST00000589969 POLA1P09884 1462 aaPredicted RBP37.28■■■■□ 3.56
NFIC-209ENST00000589969 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
NFIC-209ENST00000589969 TARBP1Q13395 1621 aaKnown RBP37.26■■■■□ 3.56
NFIC-209ENST00000589969 SUPT5HO00267 1087 aaKnown RBP37.25■■■■□ 3.55
NFIC-209ENST00000589969 AQRO60306 1485 aaKnown RBP eCLIP37.19■■■■□ 3.541e-8■■□□□ 13.2
NFIC-209ENST00000589969 SOGA1O94964 1423 aa37.16■■■■□ 3.54
NFIC-209ENST00000589969 RAD54L2Q9Y4B4 1467 aa37.11■■■■□ 3.53
NFIC-209ENST00000589969 FGD5Q6ZNL6 1462 aa37.07■■■■□ 3.53
NFIC-209ENST00000589969 CUX1P39880 1505 aa37.06■■■■□ 3.52
NFIC-209ENST00000589969 TDRD9Q8NDG6 1382 aaKnown RBP37.02■■■■□ 3.52
NFIC-209ENST00000589969 WDR97A6NE52 1622 aa36.99■■■■□ 3.51
NFIC-209ENST00000589969 FBLN2P98095 1184 aa36.93■■■■□ 3.5
NFIC-209ENST00000589969 RIMBP3CA6NJZ7 1639 aa36.91■■■■□ 3.5
NFIC-209ENST00000589969 RIMBP3BA6NNM3 1639 aa36.91■■■■□ 3.5
NFIC-209ENST00000589969 RIMBP3Q9UFD9 1639 aa36.91■■■■□ 3.5
NFIC-209ENST00000589969 CHD1O14646 1710 aa36.89■■■■□ 3.5
NFIC-209ENST00000589969 ARHGEF11O15085 1522 aa36.87■■■■□ 3.49
NFIC-209ENST00000589969 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.48
NFIC-209ENST00000589969 GRIN2BQ13224 1484 aa36.81■■■■□ 3.48
NFIC-209ENST00000589969 MAGI1Q96QZ7 1491 aaPredicted RBP36.79■■■■□ 3.48
NFIC-209ENST00000589969 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
NFIC-209ENST00000589969 ABCA10Q8WWZ4 1543 aa36.7■■■■□ 3.47
NFIC-209ENST00000589969 GAPVD1Q14C86 1478 aa36.7■■■■□ 3.47
NFIC-209ENST00000589969 WRNQ14191 1432 aaPredicted RBP eCLIP36.66■■■■□ 3.46
NFIC-209ENST00000589969 SYNJ2O15056 1496 aa36.65■■■■□ 3.46
NFIC-209ENST00000589969 CYB5RLQ6IPT4 315 aa36.62■■■■□ 3.45
NFIC-209ENST00000589969 SYNJ1O43426 1573 aa36.59■■■■□ 3.45
NFIC-209ENST00000589969 ABCA5Q8WWZ7 1642 aa36.57■■■■□ 3.44
NFIC-209ENST00000589969 TOP2BQ02880 1626 aa36.56■■■■□ 3.44
NFIC-209ENST00000589969 PBRM1Q86U86 1689 aa36.56■■■■□ 3.44
NFIC-209ENST00000589969 CLASP1Q7Z460 1538 aa36.55■■■■□ 3.44
NFIC-209ENST00000589969 BIVM-ERCC5R4GMW8 1640 aa36.53■■■■□ 3.44
NFIC-209ENST00000589969 ARAP1Q96P48 1450 aa36.51■■■■□ 3.44
NFIC-209ENST00000589969 GRIN2AQ12879 1464 aa36.31■■■■□ 3.4
NFIC-209ENST00000589969 ADAMTS12P58397 1594 aa36.28■■■■□ 3.4
NFIC-209ENST00000589969 FHAD1B1AJZ9 1412 aa36.27■■■■□ 3.4
NFIC-209ENST00000589969 ERICH3Q5RHP9 1530 aa36.26■■■■□ 3.4
NFIC-209ENST00000589969 NUP160Q12769 1436 aa36.19■■■■□ 3.38
NFIC-209ENST00000589969 TRHP20396 242 aaPredicted RBP36.14■■■■□ 3.38
NFIC-209ENST00000589969 CEP170Q5SW79 1584 aa36.1■■■■□ 3.37
NFIC-209ENST00000589969 SHROOM2Q13796 1616 aa35.95■■■■□ 3.35
NFIC-209ENST00000589969 KIF27Q86VH2 1401 aa35.93■■■■□ 3.34
NFIC-209ENST00000589969 ERCC6L2Q5T890 1561 aa35.93■■■■□ 3.34
NFIC-209ENST00000589969 IGF1RP08069 1367 aa35.87■■■■□ 3.33
NFIC-209ENST00000589969 JPH4Q96JJ6 628 aa35.86■■■■□ 3.33
NFIC-209ENST00000589969 PRG4Q92954 1404 aaPredicted RBP35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms