RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 NISCHQ9Y2I1 1504 aa41.13■■■■■ 4.17
SAFB2-204ENST00000589925 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
SAFB2-204ENST00000589925 ABCC9O60706 1549 aa35.93■■■■□ 3.34
SAFB2-204ENST00000589925 RB1CC1Q8TDY2 1594 aa34.5■■■■□ 3.11
SAFB2-204ENST00000589925 NACADO15069 1562 aa34.44■■■■□ 3.1
SAFB2-204ENST00000589925 DCAF8L2P0C7V8 631 aa34.33■■■■□ 3.09
SAFB2-204ENST00000589925 ZCCHC6Q5VYS8 1495 aaKnown RBP34.25■■■■□ 3.07
SAFB2-204ENST00000589925 MYO15BQ96JP2 1530 aa34.24■■■■□ 3.07
SAFB2-204ENST00000589925 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
SAFB2-204ENST00000589925 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
SAFB2-204ENST00000589925 PABPN1Q86U42 306 aaKnown RBP eCLIP33.55■■■□□ 2.969e-8■■■□□ 16.7
SAFB2-204ENST00000589925 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
SAFB2-204ENST00000589925 SCRIBQ14160 1630 aa33.37■■■□□ 2.93
SAFB2-204ENST00000589925 SHROOM4Q9ULL8 1493 aa33.14■■■□□ 2.9
SAFB2-204ENST00000589925 DNAJC5BQ9UF47 199 aa33.12■■■□□ 2.89
SAFB2-204ENST00000589925 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
SAFB2-204ENST00000589925 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
SAFB2-204ENST00000589925 CECR2Q9BXF3 1484 aa32.3■■■□□ 2.76
SAFB2-204ENST00000589925 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
SAFB2-204ENST00000589925 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
SAFB2-204ENST00000589925 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
SAFB2-204ENST00000589925 ATAD2BQ9ULI0 1458 aa31.8■■■□□ 2.68
SAFB2-204ENST00000589925 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
SAFB2-204ENST00000589925 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
SAFB2-204ENST00000589925 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.66
SAFB2-204ENST00000589925 HMGXB3Q12766 1538 aa31.64■■■□□ 2.66
SAFB2-204ENST00000589925 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
SAFB2-204ENST00000589925 WIZO95785 1651 aa31.32■■■□□ 2.6
SAFB2-204ENST00000589925 RSF1Q96T23 1441 aaPredicted RBP31.3■■■□□ 2.6
SAFB2-204ENST00000589925 NESP48681 1621 aa31.07■■■□□ 2.56
SAFB2-204ENST00000589925 TOP2AP11388 1531 aaKnown RBP30.99■■■□□ 2.55
SAFB2-204ENST00000589925 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
SAFB2-204ENST00000589925 LAMC3Q9Y6N6 1575 aa30.96■■■□□ 2.55
SAFB2-204ENST00000589925 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
SAFB2-204ENST00000589925 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
SAFB2-204ENST00000589925 CUX2O14529 1486 aa30.71■■■□□ 2.51
SAFB2-204ENST00000589925 CFTRP13569 1480 aa30.67■■■□□ 2.5
SAFB2-204ENST00000589925 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
SAFB2-204ENST00000589925 CCDC88BA6NC98 1476 aa30.63■■■□□ 2.49
SAFB2-204ENST00000589925 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
SAFB2-204ENST00000589925 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
SAFB2-204ENST00000589925 CEP164Q9UPV0 1460 aa30.47■■■□□ 2.47
SAFB2-204ENST00000589925 MRC2Q9UBG0 1479 aa30.46■■■□□ 2.47
SAFB2-204ENST00000589925 WDR62O43379 1518 aa30.38■■■□□ 2.45
SAFB2-204ENST00000589925 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
SAFB2-204ENST00000589925 PRDM2Q13029 1718 aa30.33■■■□□ 2.45
SAFB2-204ENST00000589925 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
SAFB2-204ENST00000589925 TOPBP1Q92547 1522 aa30■■■□□ 2.39
SAFB2-204ENST00000589925 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
SAFB2-204ENST00000589925 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.39
SAFB2-204ENST00000589925 DNAJC5Q9H3Z4 198 aa29.9■■■□□ 2.38
SAFB2-204ENST00000589925 IFT140Q96RY7 1462 aa29.84■■■□□ 2.37
SAFB2-204ENST00000589925 POLA1P09884 1462 aaPredicted RBP29.75■■■□□ 2.35
SAFB2-204ENST00000589925 CUX1P39880 1505 aa29.74■■■□□ 2.35
SAFB2-204ENST00000589925 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
SAFB2-204ENST00000589925 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
SAFB2-204ENST00000589925 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
SAFB2-204ENST00000589925 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
SAFB2-204ENST00000589925 SOGA1O94964 1423 aa29.6■■■□□ 2.33
SAFB2-204ENST00000589925 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
SAFB2-204ENST00000589925 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.322e-8■■■■□ 26.5
SAFB2-204ENST00000589925 WRNQ14191 1432 aaPredicted RBP eCLIP29.49■■■□□ 2.31
SAFB2-204ENST00000589925 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
SAFB2-204ENST00000589925 TOP2BQ02880 1626 aa29.45■■■□□ 2.3
SAFB2-204ENST00000589925 WDR97A6NE52 1622 aa29.44■■■□□ 2.3
SAFB2-204ENST00000589925 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
SAFB2-204ENST00000589925 BIVM-ERCC5R4GMW8 1640 aa29.43■■■□□ 2.3
SAFB2-204ENST00000589925 OSCARQ8IYS5 282 aa29.39■■■□□ 2.3
SAFB2-204ENST00000589925 ABCA10Q8WWZ4 1543 aa29.36■■■□□ 2.29
SAFB2-204ENST00000589925 GRIN2BQ13224 1484 aa29.28■■■□□ 2.28
SAFB2-204ENST00000589925 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
SAFB2-204ENST00000589925 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
SAFB2-204ENST00000589925 ABCA5Q8WWZ7 1642 aa29.26■■■□□ 2.27
SAFB2-204ENST00000589925 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
SAFB2-204ENST00000589925 CHD1O14646 1710 aa29.2■■■□□ 2.26
SAFB2-204ENST00000589925 PBRM1Q86U86 1689 aa29.17■■■□□ 2.26
SAFB2-204ENST00000589925 FBLN2P98095 1184 aa29.16■■■□□ 2.26
SAFB2-204ENST00000589925 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
SAFB2-204ENST00000589925 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
SAFB2-204ENST00000589925 ERICH3Q5RHP9 1530 aa29■■■□□ 2.23
SAFB2-204ENST00000589925 ADAMTS12P58397 1594 aa28.98■■■□□ 2.23
SAFB2-204ENST00000589925 ARHGEF11O15085 1522 aa28.94■■■□□ 2.22
SAFB2-204ENST00000589925 CLASP1Q7Z460 1538 aa28.94■■■□□ 2.22
SAFB2-204ENST00000589925 RIMBP3CA6NJZ7 1639 aa28.94■■■□□ 2.22
SAFB2-204ENST00000589925 RIMBP3BA6NNM3 1639 aa28.94■■■□□ 2.22
SAFB2-204ENST00000589925 RIMBP3Q9UFD9 1639 aa28.94■■■□□ 2.22
SAFB2-204ENST00000589925 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
SAFB2-204ENST00000589925 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
SAFB2-204ENST00000589925 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
SAFB2-204ENST00000589925 TRIM41Q8WV44 630 aa28.83■■■□□ 2.21
SAFB2-204ENST00000589925 NUP160Q12769 1436 aa28.8■■■□□ 2.2
SAFB2-204ENST00000589925 IGF1RP08069 1367 aa28.8■■■□□ 2.2
SAFB2-204ENST00000589925 CEP170Q5SW79 1584 aa28.77■■■□□ 2.2
SAFB2-204ENST00000589925 ARAP1Q96P48 1450 aa28.71■■■□□ 2.19
SAFB2-204ENST00000589925 CUL7Q14999 1698 aa28.69■■■□□ 2.18
SAFB2-204ENST00000589925 CYB5RLQ6IPT4 315 aa28.65■■■□□ 2.18
SAFB2-204ENST00000589925 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
SAFB2-204ENST00000589925 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
SAFB2-204ENST00000589925 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
SAFB2-204ENST00000589925 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms