RNA–Protein interactions for RNA: ENST00000589916.5

BCAS3-223, Transcript of BCAS3, microtubule associated cell migration factor, human

TSL 2

Gene BCAS3, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-223	ENST00000589916	NISCH	Q9Y2I1	1504 aa		14	□□□□□ -0.17
BCAS3-223	ENST00000589916	ABCC9	O60706	1549 aa		13.27	□□□□□ -0.29
BCAS3-223	ENST00000589916	DNAJC5B	Q9UF47	199 aa		13.24	□□□□□ -0.29
BCAS3-223	ENST00000589916	DNAJC5	Q9H3Z4	198 aa		12.84	□□□□□ -0.35
BCAS3-223	ENST00000589916	CCDC180	Q9P1Z9	1646 aa		12.8	□□□□□ -0.36
BCAS3-223	ENST00000589916	RB1CC1	Q8TDY2	1594 aa		12.47	□□□□□ -0.41
BCAS3-223	ENST00000589916	NACAD	O15069	1562 aa		12.3	□□□□□ -0.44
BCAS3-223	ENST00000589916	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.27	□□□□□ -0.45
BCAS3-223	ENST00000589916	BICRA	Q9NZM4	1560 aa		12.14	□□□□□ -0.47
BCAS3-223	ENST00000589916	CECR2	Q9BXF3	1484 aa		12.09	□□□□□ -0.47
BCAS3-223	ENST00000589916	SHROOM4	Q9ULL8	1493 aa		12.08	□□□□□ -0.47
BCAS3-223	ENST00000589916	MYO15B	Q96JP2	1530 aa		12.08	□□□□□ -0.48
BCAS3-223	ENST00000589916	UNC13A	Q9UPW8	1703 aa		12.05	□□□□□ -0.48
BCAS3-223	ENST00000589916	CC2D2A	Q9P2K1	1620 aa		12	□□□□□ -0.49
BCAS3-223	ENST00000589916	TRIM41	Q8WV44	630 aa		11.89	□□□□□ -0.51
BCAS3-223	ENST00000589916	EIF4G1	Q04637	1599 aa	Known RBP	11.87	□□□□□ -0.51
BCAS3-223	ENST00000589916	DCAF8L2	P0C7V8	631 aa		11.86	□□□□□ -0.51
BCAS3-223	ENST00000589916	CUX2	O14529	1486 aa		11.84	□□□□□ -0.51
BCAS3-223	ENST00000589916	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.77	□□□□□ -0.53
BCAS3-223	ENST00000589916	CHIC1	Q5VXU3	224 aa		11.68	□□□□□ -0.54
BCAS3-223	ENST00000589916	DCAF1	Q9Y4B6	1507 aa		11.65	□□□□□ -0.54
BCAS3-223	ENST00000589916	SCRIB	Q14160	1630 aa		11.53	□□□□□ -0.56
BCAS3-223	ENST00000589916	ERCC6	Q03468	1493 aa		11.5	□□□□□ -0.57
BCAS3-223	ENST00000589916	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.48	□□□□□ -0.57
BCAS3-223	ENST00000589916	NCAPD3	P42695	1498 aa		11.43	□□□□□ -0.58
BCAS3-223	ENST00000589916	THOC2	Q8NI27	1593 aa	Known RBP	11.28	□□□□□ -0.6
BCAS3-223	ENST00000589916	NES	P48681	1621 aa		11.24	□□□□□ -0.61
BCAS3-223	ENST00000589916	ATAD2B	Q9ULI0	1458 aa		11.23	□□□□□ -0.61
BCAS3-223	ENST00000589916	HMGXB3	Q12766	1538 aa		11.21	□□□□□ -0.61
BCAS3-223	ENST00000589916	OSCAR	Q8IYS5	282 aa		11.19	□□□□□ -0.62
BCAS3-223	ENST00000589916	LAMC3	Q9Y6N6	1575 aa		11.17	□□□□□ -0.62
BCAS3-223	ENST00000589916	PDS5B	Q9NTI5	1447 aa		11.15	□□□□□ -0.62
BCAS3-223	ENST00000589916	SMARCA2	P51531	1590 aa		11.15	□□□□□ -0.62
BCAS3-223	ENST00000589916	ILDR1	Q86SU0	546 aa	Predicted RBP	11.14	□□□□□ -0.63
BCAS3-223	ENST00000589916	TRH	P20396	242 aa	Predicted RBP	11.11	□□□□□ -0.63
BCAS3-223	ENST00000589916	WDR62	O43379	1518 aa		11.06	□□□□□ -0.64
BCAS3-223	ENST00000589916	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.06	□□□□□ -0.64
BCAS3-223	ENST00000589916	MRC2	Q9UBG0	1479 aa		11.04	□□□□□ -0.64
BCAS3-223	ENST00000589916	PEG3	Q9GZU2	1588 aa		11.03	□□□□□ -0.64
BCAS3-223	ENST00000589916	KIF21A	Q7Z4S6	1674 aa		11.01	□□□□□ -0.65
BCAS3-223	ENST00000589916	CADPS	Q9ULU8	1353 aa		11.01	□□□□□ -0.65
BCAS3-223	ENST00000589916	BAZ1B	Q9UIG0	1483 aa	Known RBP	11	□□□□□ -0.65
BCAS3-223	ENST00000589916	RIMBP3C	A6NJZ7	1639 aa		10.98	□□□□□ -0.65
BCAS3-223	ENST00000589916	RIMBP3B	A6NNM3	1639 aa		10.98	□□□□□ -0.65
BCAS3-223	ENST00000589916	SMARCA4	P51532	1647 aa		10.98	□□□□□ -0.65
BCAS3-223	ENST00000589916	RIMBP3	Q9UFD9	1639 aa		10.98	□□□□□ -0.65
BCAS3-223	ENST00000589916	ARHGEF11	O15085	1522 aa		10.94	□□□□□ -0.66
BCAS3-223	ENST00000589916	CYB5RL	Q6IPT4	315 aa		10.94	□□□□□ -0.66
BCAS3-223	ENST00000589916	CEP164	Q9UPV0	1460 aa		10.84	□□□□□ -0.67
BCAS3-223	ENST00000589916	ARAP1	Q96P48	1450 aa		10.8	□□□□□ -0.68
BCAS3-223	ENST00000589916	FANCD2	Q9BXW9	1451 aa		10.8	□□□□□ -0.68
BCAS3-223	ENST00000589916	RSF1	Q96T23	1441 aa	Predicted RBP	10.78	□□□□□ -0.68
BCAS3-223	ENST00000589916	CFTR	P13569	1480 aa		10.76	□□□□□ -0.69
BCAS3-223	ENST00000589916	URB2	Q14146	1524 aa	Known RBP	10.74	□□□□□ -0.69
BCAS3-223	ENST00000589916	MROH2B	Q7Z745	1585 aa		10.72	□□□□□ -0.69
BCAS3-223	ENST00000589916	IFT140	Q96RY7	1462 aa		10.71	□□□□□ -0.69
BCAS3-223	ENST00000589916	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.68	□□□□□ -0.7
BCAS3-223	ENST00000589916	ABCC8	Q09428	1581 aa		10.56	□□□□□ -0.72
BCAS3-223	ENST00000589916	KDM4F	A0A1W2PPD8	638 aa		10.55	□□□□□ -0.72
BCAS3-223	ENST00000589916	EIF4G3	O43432	1585 aa	Known RBP	10.55	□□□□□ -0.72
BCAS3-223	ENST00000589916	CLASP1	Q7Z460	1538 aa		10.54	□□□□□ -0.72
BCAS3-223	ENST00000589916	FBXO41	Q8TF61	875 aa		10.53	□□□□□ -0.72
BCAS3-223	ENST00000589916	TOPBP1	Q92547	1522 aa		10.53	□□□□□ -0.72
BCAS3-223	ENST00000589916	CHD1	O14646	1710 aa		10.52	□□□□□ -0.73
BCAS3-223	ENST00000589916	AQR	O60306	1485 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
BCAS3-223	ENST00000589916	LMTK3	Q96Q04	1460 aa		10.5	□□□□□ -0.73
BCAS3-223	ENST00000589916	SOCS7	O14512	581 aa		10.49	□□□□□ -0.73
BCAS3-223	ENST00000589916	TARBP1	Q13395	1621 aa	Known RBP	10.48	□□□□□ -0.73
BCAS3-223	ENST00000589916	WIZ	O95785	1651 aa		10.48	□□□□□ -0.73
BCAS3-223	ENST00000589916	FBLN2	P98095	1184 aa		10.46	□□□□□ -0.73
BCAS3-223	ENST00000589916	GAPVD1	Q14C86	1478 aa		10.45	□□□□□ -0.74
BCAS3-223	ENST00000589916	SYNJ1	O43426	1573 aa		10.43	□□□□□ -0.74
BCAS3-223	ENST00000589916	WDR97	A6NE52	1622 aa		10.43	□□□□□ -0.74
BCAS3-223	ENST00000589916	DNMBP	Q6XZF7	1577 aa		10.43	□□□□□ -0.74
BCAS3-223	ENST00000589916	PRDM2	Q13029	1718 aa		10.41	□□□□□ -0.74
BCAS3-223	ENST00000589916	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.41	□□□□□ -0.74
BCAS3-223	ENST00000589916	TOP2A	P11388	1531 aa	Known RBP	10.4	□□□□□ -0.74
BCAS3-223	ENST00000589916	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.4	□□□□□ -0.74
BCAS3-223	ENST00000589916	POLA1	P09884	1462 aa	Predicted RBP	10.39	□□□□□ -0.75
BCAS3-223	ENST00000589916	SYNJ2	O15056	1496 aa		10.37	□□□□□ -0.75
BCAS3-223	ENST00000589916	ILDR2	Q71H61	639 aa		10.37	□□□□□ -0.75
BCAS3-223	ENST00000589916	SNAPC4	Q5SXM2	1469 aa		10.36	□□□□□ -0.75
BCAS3-223	ENST00000589916	ERCC6L2	Q5T890	1561 aa		10.36	□□□□□ -0.75
BCAS3-223	ENST00000589916	TDRD9	Q8NDG6	1382 aa	Known RBP	10.36	□□□□□ -0.75
BCAS3-223	ENST00000589916	SOGA1	O94964	1423 aa		10.33	□□□□□ -0.76
BCAS3-223	ENST00000589916	GRIN2B	Q13224	1484 aa		10.33	□□□□□ -0.76
BCAS3-223	ENST00000589916	KIF13A	Q9H1H9	1805 aa		10.3	□□□□□ -0.76
BCAS3-223	ENST00000589916	ABCC10	Q5T3U5	1492 aa		10.3	□□□□□ -0.76
BCAS3-223	ENST00000589916	RAD54L2	Q9Y4B4	1467 aa		10.3	□□□□□ -0.76
BCAS3-223	ENST00000589916	PHF23	Q9BUL5	403 aa	Predicted RBP	10.3	□□□□□ -0.76
BCAS3-223	ENST00000589916	CCDC88B	A6NC98	1476 aa		10.3	□□□□□ -0.76
BCAS3-223	ENST00000589916	HECW2	Q9P2P5	1572 aa		10.28	□□□□□ -0.76
BCAS3-223	ENST00000589916	DISP3	Q9P2K9	1392 aa		10.26	□□□□□ -0.77
BCAS3-223	ENST00000589916	FAM69C	Q0P6D2	419 aa		10.24	□□□□□ -0.77
BCAS3-223	ENST00000589916	NUP160	Q12769	1436 aa		10.24	□□□□□ -0.77
BCAS3-223	ENST00000589916	MAPKBP1	O60336	1514 aa		10.23	□□□□□ -0.77
BCAS3-223	ENST00000589916	SHROOM2	Q13796	1616 aa		10.22	□□□□□ -0.77
BCAS3-223	ENST00000589916	CEP170	Q5SW79	1584 aa		10.21	□□□□□ -0.78
BCAS3-223	ENST00000589916	KDM6B	O15054	1643 aa		10.19	□□□□□ -0.78
BCAS3-223	ENST00000589916	FGD5	Q6ZNL6	1462 aa		10.19	□□□□□ -0.78

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