RNA–Protein interactions for RNA: ENST00000589877.5

SMAD2-211, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-211ENST00000589877 NISCHQ9Y2I1 1504 aa41.77■■■■■ 4.28
SMAD2-211ENST00000589877 CCDC180Q9P1Z9 1646 aa37.36■■■■□ 3.57
SMAD2-211ENST00000589877 ABCC9O60706 1549 aa37.28■■■■□ 3.56
SMAD2-211ENST00000589877 RB1CC1Q8TDY2 1594 aa35.52■■■■□ 3.28
SMAD2-211ENST00000589877 NACADO15069 1562 aa35.34■■■■□ 3.25
SMAD2-211ENST00000589877 DCAF8L2P0C7V8 631 aa35.28■■■■□ 3.24
SMAD2-211ENST00000589877 DNAJC5BQ9UF47 199 aa34.93■■■■□ 3.18
SMAD2-211ENST00000589877 MYO15BQ96JP2 1530 aa34.89■■■■□ 3.18
SMAD2-211ENST00000589877 PABPN1Q86U42 306 aaKnown RBP eCLIP34.79■■■■□ 3.16
SMAD2-211ENST00000589877 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
SMAD2-211ENST00000589877 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
SMAD2-211ENST00000589877 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
SMAD2-211ENST00000589877 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
SMAD2-211ENST00000589877 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
SMAD2-211ENST00000589877 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
SMAD2-211ENST00000589877 CC2D2AQ9P2K1 1620 aa33.68■■■□□ 2.98
SMAD2-211ENST00000589877 EIF4G1Q04637 1599 aaKnown RBP33.63■■■□□ 2.97
SMAD2-211ENST00000589877 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
SMAD2-211ENST00000589877 NCAPD3P42695 1498 aa32.65■■■□□ 2.82
SMAD2-211ENST00000589877 ATAD2BQ9ULI0 1458 aa32.56■■■□□ 2.8
SMAD2-211ENST00000589877 SMARCA4P51532 1647 aa32.52■■■□□ 2.8
SMAD2-211ENST00000589877 SMARCA2P51531 1590 aa32.45■■■□□ 2.78
SMAD2-211ENST00000589877 BAZ1AQ9NRL2 1556 aaPredicted RBP32.39■■■□□ 2.78
SMAD2-211ENST00000589877 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
SMAD2-211ENST00000589877 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
SMAD2-211ENST00000589877 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
SMAD2-211ENST00000589877 MROH2BQ7Z745 1585 aa32.18■■■□□ 2.74
SMAD2-211ENST00000589877 ERCC6Q03468 1493 aa32.16■■■□□ 2.74
SMAD2-211ENST00000589877 NESP48681 1621 aa32.07■■■□□ 2.72
SMAD2-211ENST00000589877 CUX2O14529 1486 aa32.06■■■□□ 2.72
SMAD2-211ENST00000589877 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
SMAD2-211ENST00000589877 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
SMAD2-211ENST00000589877 WIZO95785 1651 aa31.8■■■□□ 2.68
SMAD2-211ENST00000589877 PDS5BQ9NTI5 1447 aa31.7■■■□□ 2.67
SMAD2-211ENST00000589877 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
SMAD2-211ENST00000589877 THOC2Q8NI27 1593 aaKnown RBP31.67■■■□□ 2.66
SMAD2-211ENST00000589877 KIF21AQ7Z4S6 1674 aa31.63■■■□□ 2.65
SMAD2-211ENST00000589877 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
SMAD2-211ENST00000589877 MRC2Q9UBG0 1479 aa31.38■■■□□ 2.61
SMAD2-211ENST00000589877 TOP2AP11388 1531 aaKnown RBP31.38■■■□□ 2.61
SMAD2-211ENST00000589877 CFTRP13569 1480 aa31.33■■■□□ 2.61
SMAD2-211ENST00000589877 WDR62O43379 1518 aa31.29■■■□□ 2.6
SMAD2-211ENST00000589877 CEP164Q9UPV0 1460 aa31.28■■■□□ 2.6
SMAD2-211ENST00000589877 FANCD2Q9BXW9 1451 aa31.27■■■□□ 2.6
SMAD2-211ENST00000589877 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
SMAD2-211ENST00000589877 URB2Q14146 1524 aaKnown RBP31.01■■■□□ 2.55
SMAD2-211ENST00000589877 PRDM2Q13029 1718 aa30.94■■■□□ 2.54
SMAD2-211ENST00000589877 OSCARQ8IYS5 282 aa30.71■■■□□ 2.51
SMAD2-211ENST00000589877 TOPBP1Q92547 1522 aa30.7■■■□□ 2.51
SMAD2-211ENST00000589877 IFT140Q96RY7 1462 aa30.67■■■□□ 2.5
SMAD2-211ENST00000589877 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
SMAD2-211ENST00000589877 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
SMAD2-211ENST00000589877 TRIM41Q8WV44 630 aa30.6■■■□□ 2.49
SMAD2-211ENST00000589877 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
SMAD2-211ENST00000589877 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
SMAD2-211ENST00000589877 EIF4G3O43432 1585 aaKnown RBP30.4■■■□□ 2.46
SMAD2-211ENST00000589877 POLA1P09884 1462 aaPredicted RBP30.39■■■□□ 2.46
SMAD2-211ENST00000589877 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.45
SMAD2-211ENST00000589877 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
SMAD2-211ENST00000589877 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
SMAD2-211ENST00000589877 SOGA1O94964 1423 aa30.3■■■□□ 2.44
SMAD2-211ENST00000589877 CUX1P39880 1505 aa30.22■■■□□ 2.43
SMAD2-211ENST00000589877 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
SMAD2-211ENST00000589877 FGD5Q6ZNL6 1462 aa30.22■■■□□ 2.43
SMAD2-211ENST00000589877 RIMBP3CA6NJZ7 1639 aa30.2■■■□□ 2.43
SMAD2-211ENST00000589877 RIMBP3BA6NNM3 1639 aa30.2■■■□□ 2.43
SMAD2-211ENST00000589877 RIMBP3Q9UFD9 1639 aa30.2■■■□□ 2.43
SMAD2-211ENST00000589877 FBLN2P98095 1184 aa30.18■■■□□ 2.42
SMAD2-211ENST00000589877 CHD1O14646 1710 aa30.15■■■□□ 2.42
SMAD2-211ENST00000589877 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
SMAD2-211ENST00000589877 WDR97A6NE52 1622 aa30.08■■■□□ 2.41
SMAD2-211ENST00000589877 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
SMAD2-211ENST00000589877 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
SMAD2-211ENST00000589877 CYB5RLQ6IPT4 315 aa29.98■■■□□ 2.39
SMAD2-211ENST00000589877 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
SMAD2-211ENST00000589877 MAGI1Q96QZ7 1491 aaPredicted RBP29.96■■■□□ 2.39
SMAD2-211ENST00000589877 GAPVD1Q14C86 1478 aa29.91■■■□□ 2.38
SMAD2-211ENST00000589877 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
SMAD2-211ENST00000589877 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
SMAD2-211ENST00000589877 ARAP1Q96P48 1450 aa29.84■■■□□ 2.37
SMAD2-211ENST00000589877 PBRM1Q86U86 1689 aa29.83■■■□□ 2.37
SMAD2-211ENST00000589877 SYNJ1O43426 1573 aa29.82■■■□□ 2.36
SMAD2-211ENST00000589877 CLASP1Q7Z460 1538 aa29.82■■■□□ 2.36
SMAD2-211ENST00000589877 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
SMAD2-211ENST00000589877 ABCA5Q8WWZ7 1642 aa29.8■■■□□ 2.36
SMAD2-211ENST00000589877 TOP2BQ02880 1626 aa29.76■■■□□ 2.35
SMAD2-211ENST00000589877 BIVM-ERCC5R4GMW8 1640 aa29.74■■■□□ 2.35
SMAD2-211ENST00000589877 TRHP20396 242 aaPredicted RBP29.59■■■□□ 2.33
SMAD2-211ENST00000589877 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
SMAD2-211ENST00000589877 ADAMTS12P58397 1594 aa29.55■■■□□ 2.32
SMAD2-211ENST00000589877 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
SMAD2-211ENST00000589877 ERICH3Q5RHP9 1530 aa29.51■■■□□ 2.32
SMAD2-211ENST00000589877 NUP160Q12769 1436 aa29.5■■■□□ 2.31
SMAD2-211ENST00000589877 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
SMAD2-211ENST00000589877 ERCC6L2Q5T890 1561 aa29.39■■■□□ 2.3
SMAD2-211ENST00000589877 SHROOM2Q13796 1616 aa29.32■■■□□ 2.28
SMAD2-211ENST00000589877 JPH4Q96JJ6 628 aa29.28■■■□□ 2.28
SMAD2-211ENST00000589877 IGF1RP08069 1367 aa29.24■■■□□ 2.27
SMAD2-211ENST00000589877 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
SMAD2-211ENST00000589877 PRG4Q92954 1404 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms