RNA–Protein interactions for RNA: ENST00000589605.5

RDH13-214, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-214ENST00000589605 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
RDH13-214ENST00000589605 ABCC9O60706 1549 aa28.17■■■□□ 2.1
RDH13-214ENST00000589605 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
RDH13-214ENST00000589605 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.87
RDH13-214ENST00000589605 NACADO15069 1562 aa26.54■■□□□ 1.84
RDH13-214ENST00000589605 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
RDH13-214ENST00000589605 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
RDH13-214ENST00000589605 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
RDH13-214ENST00000589605 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
RDH13-214ENST00000589605 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
RDH13-214ENST00000589605 BICRAQ9NZM4 1560 aa25.99■■□□□ 1.75
RDH13-214ENST00000589605 ZCCHC6Q5VYS8 1495 aaKnown RBP25.83■■□□□ 1.73
RDH13-214ENST00000589605 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
RDH13-214ENST00000589605 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
RDH13-214ENST00000589605 SCRIBQ14160 1630 aa25.57■■□□□ 1.68
RDH13-214ENST00000589605 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
RDH13-214ENST00000589605 CECR2Q9BXF3 1484 aa25.39■■□□□ 1.65
RDH13-214ENST00000589605 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
RDH13-214ENST00000589605 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
RDH13-214ENST00000589605 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
RDH13-214ENST00000589605 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
RDH13-214ENST00000589605 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
RDH13-214ENST00000589605 CUX2O14529 1486 aa24.35■■□□□ 1.49
RDH13-214ENST00000589605 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
RDH13-214ENST00000589605 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
RDH13-214ENST00000589605 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
RDH13-214ENST00000589605 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
RDH13-214ENST00000589605 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
RDH13-214ENST00000589605 NESP48681 1621 aa24.16■■□□□ 1.46
RDH13-214ENST00000589605 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
RDH13-214ENST00000589605 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
RDH13-214ENST00000589605 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
RDH13-214ENST00000589605 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
RDH13-214ENST00000589605 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.41
RDH13-214ENST00000589605 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
RDH13-214ENST00000589605 WIZO95785 1651 aa23.73■■□□□ 1.39
RDH13-214ENST00000589605 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
RDH13-214ENST00000589605 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
RDH13-214ENST00000589605 WDR62O43379 1518 aa23.61■■□□□ 1.37
RDH13-214ENST00000589605 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
RDH13-214ENST00000589605 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
RDH13-214ENST00000589605 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
RDH13-214ENST00000589605 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
RDH13-214ENST00000589605 CFTRP13569 1480 aa23.43■■□□□ 1.34
RDH13-214ENST00000589605 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
RDH13-214ENST00000589605 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
RDH13-214ENST00000589605 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
RDH13-214ENST00000589605 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
RDH13-214ENST00000589605 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
RDH13-214ENST00000589605 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
RDH13-214ENST00000589605 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
RDH13-214ENST00000589605 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
RDH13-214ENST00000589605 DNMBPQ6XZF7 1577 aa22.95■■□□□ 1.26
RDH13-214ENST00000589605 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
RDH13-214ENST00000589605 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
RDH13-214ENST00000589605 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
RDH13-214ENST00000589605 EIF4G3O43432 1585 aaKnown RBP22.94■■□□□ 1.26
RDH13-214ENST00000589605 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
RDH13-214ENST00000589605 ARHGEF11O15085 1522 aa22.84■■□□□ 1.25
RDH13-214ENST00000589605 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
RDH13-214ENST00000589605 CHD1O14646 1710 aa22.79■■□□□ 1.24
RDH13-214ENST00000589605 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.246e-7■■■■□ 22.2
RDH13-214ENST00000589605 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
RDH13-214ENST00000589605 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
RDH13-214ENST00000589605 SOGA1O94964 1423 aa22.64■■□□□ 1.21
RDH13-214ENST00000589605 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
RDH13-214ENST00000589605 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
RDH13-214ENST00000589605 FBLN2P98095 1184 aa22.62■■□□□ 1.21
RDH13-214ENST00000589605 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
RDH13-214ENST00000589605 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
RDH13-214ENST00000589605 CYB5RLQ6IPT4 315 aa22.6■■□□□ 1.21
RDH13-214ENST00000589605 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
RDH13-214ENST00000589605 CUX1P39880 1505 aa22.58■■□□□ 1.21
RDH13-214ENST00000589605 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
RDH13-214ENST00000589605 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
RDH13-214ENST00000589605 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
RDH13-214ENST00000589605 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
RDH13-214ENST00000589605 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
RDH13-214ENST00000589605 SYNJ2O15056 1496 aa22.43■■□□□ 1.18
RDH13-214ENST00000589605 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
RDH13-214ENST00000589605 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
RDH13-214ENST00000589605 GAPVD1Q14C86 1478 aa22.38■■□□□ 1.17
RDH13-214ENST00000589605 ABCA5Q8WWZ7 1642 aa22.37■■□□□ 1.17
RDH13-214ENST00000589605 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
RDH13-214ENST00000589605 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
RDH13-214ENST00000589605 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
RDH13-214ENST00000589605 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
RDH13-214ENST00000589605 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
RDH13-214ENST00000589605 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.15
RDH13-214ENST00000589605 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
RDH13-214ENST00000589605 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
RDH13-214ENST00000589605 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
RDH13-214ENST00000589605 NUP160Q12769 1436 aa22.13■■□□□ 1.13
RDH13-214ENST00000589605 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
RDH13-214ENST00000589605 SHROOM2Q13796 1616 aa22.08■■□□□ 1.13
RDH13-214ENST00000589605 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
RDH13-214ENST00000589605 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
RDH13-214ENST00000589605 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
RDH13-214ENST00000589605 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
RDH13-214ENST00000589605 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms