RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
MBD1-218ENST00000589541 ABCC9O60706 1549 aa26.53■■□□□ 1.84
MBD1-218ENST00000589541 CCDC180Q9P1Z9 1646 aa26.45■■□□□ 1.82
MBD1-218ENST00000589541 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
MBD1-218ENST00000589541 NACADO15069 1562 aa25.03■■□□□ 1.6
MBD1-218ENST00000589541 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
MBD1-218ENST00000589541 DNAJC5BQ9UF47 199 aa24.89■■□□□ 1.58
MBD1-218ENST00000589541 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
MBD1-218ENST00000589541 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
MBD1-218ENST00000589541 UNC13AQ9UPW8 1703 aa24.59■■□□□ 1.53
MBD1-218ENST00000589541 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
MBD1-218ENST00000589541 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
MBD1-218ENST00000589541 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
MBD1-218ENST00000589541 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
MBD1-218ENST00000589541 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
MBD1-218ENST00000589541 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
MBD1-218ENST00000589541 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
MBD1-218ENST00000589541 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
MBD1-218ENST00000589541 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
MBD1-218ENST00000589541 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
MBD1-218ENST00000589541 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
MBD1-218ENST00000589541 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
MBD1-218ENST00000589541 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
MBD1-218ENST00000589541 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
MBD1-218ENST00000589541 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
MBD1-218ENST00000589541 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
MBD1-218ENST00000589541 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
MBD1-218ENST00000589541 CUX2O14529 1486 aa22.82■■□□□ 1.24
MBD1-218ENST00000589541 NESP48681 1621 aa22.79■■□□□ 1.24
MBD1-218ENST00000589541 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
MBD1-218ENST00000589541 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
MBD1-218ENST00000589541 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
MBD1-218ENST00000589541 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
MBD1-218ENST00000589541 WIZO95785 1651 aa22.49■■□□□ 1.19
MBD1-218ENST00000589541 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
MBD1-218ENST00000589541 KIF21AQ7Z4S6 1674 aa22.45■■□□□ 1.18
MBD1-218ENST00000589541 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
MBD1-218ENST00000589541 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
MBD1-218ENST00000589541 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
MBD1-218ENST00000589541 WDR62O43379 1518 aa22.21■■□□□ 1.15
MBD1-218ENST00000589541 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
MBD1-218ENST00000589541 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
MBD1-218ENST00000589541 FANCD2Q9BXW9 1451 aa22.19■■□□□ 1.14
MBD1-218ENST00000589541 CFTRP13569 1480 aa22.17■■□□□ 1.14
MBD1-218ENST00000589541 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
MBD1-218ENST00000589541 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
MBD1-218ENST00000589541 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
MBD1-218ENST00000589541 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
MBD1-218ENST00000589541 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
MBD1-218ENST00000589541 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
MBD1-218ENST00000589541 IFT140Q96RY7 1462 aa21.76■■□□□ 1.07
MBD1-218ENST00000589541 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
MBD1-218ENST00000589541 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
MBD1-218ENST00000589541 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
MBD1-218ENST00000589541 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
MBD1-218ENST00000589541 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.047e-7■■■□□ 16.5
MBD1-218ENST00000589541 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
MBD1-218ENST00000589541 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
MBD1-218ENST00000589541 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
MBD1-218ENST00000589541 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
MBD1-218ENST00000589541 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
MBD1-218ENST00000589541 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
MBD1-218ENST00000589541 SOGA1O94964 1423 aa21.46■■□□□ 1.03
MBD1-218ENST00000589541 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
MBD1-218ENST00000589541 FBLN2P98095 1184 aa21.45■■□□□ 1.02
MBD1-218ENST00000589541 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
MBD1-218ENST00000589541 CHD1O14646 1710 aa21.41■■□□□ 1.02
MBD1-218ENST00000589541 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
MBD1-218ENST00000589541 CUX1P39880 1505 aa21.39■■□□□ 1.02
MBD1-218ENST00000589541 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
MBD1-218ENST00000589541 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
MBD1-218ENST00000589541 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
MBD1-218ENST00000589541 WDR97A6NE52 1622 aa21.29■■□□□ 1
MBD1-218ENST00000589541 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
MBD1-218ENST00000589541 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
MBD1-218ENST00000589541 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
MBD1-218ENST00000589541 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
MBD1-218ENST00000589541 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
MBD1-218ENST00000589541 GAPVD1Q14C86 1478 aa21.19■□□□□ 0.98
MBD1-218ENST00000589541 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
MBD1-218ENST00000589541 SYNJ1O43426 1573 aa21.18■□□□□ 0.98
MBD1-218ENST00000589541 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
MBD1-218ENST00000589541 PBRM1Q86U86 1689 aa21.13■□□□□ 0.97
MBD1-218ENST00000589541 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
MBD1-218ENST00000589541 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
MBD1-218ENST00000589541 WRNQ14191 1432 aaPredicted RBP eCLIP21.1■□□□□ 0.97
MBD1-218ENST00000589541 TOP2BQ02880 1626 aa21.03■□□□□ 0.96
MBD1-218ENST00000589541 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
MBD1-218ENST00000589541 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
MBD1-218ENST00000589541 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
MBD1-218ENST00000589541 FHAD1B1AJZ9 1412 aa20.92■□□□□ 0.94
MBD1-218ENST00000589541 NUP160Q12769 1436 aa20.91■□□□□ 0.94
MBD1-218ENST00000589541 CEP170Q5SW79 1584 aa20.9■□□□□ 0.94
MBD1-218ENST00000589541 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
MBD1-218ENST00000589541 ERCC6L2Q5T890 1561 aa20.88■□□□□ 0.93
MBD1-218ENST00000589541 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
MBD1-218ENST00000589541 PRG4Q92954 1404 aaPredicted RBP20.73■□□□□ 0.91
MBD1-218ENST00000589541 JPH4Q96JJ6 628 aa20.72■□□□□ 0.91
MBD1-218ENST00000589541 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
MBD1-218ENST00000589541 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms