RNA–Protein interactions for RNA: ENST00000589530.5

KDSR-208, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

TSL 2

Gene KDSR, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-208ENST00000589530 NISCHQ9Y2I1 1504 aa49.67■■■■■ 5.54
KDSR-208ENST00000589530 CCDC180Q9P1Z9 1646 aa44.36■■■■■ 4.69
KDSR-208ENST00000589530 ABCC9O60706 1549 aa44.15■■■■■ 4.66
KDSR-208ENST00000589530 RB1CC1Q8TDY2 1594 aa42.11■■■■■ 4.33
KDSR-208ENST00000589530 NACADO15069 1562 aa41.92■■■■■ 4.3
KDSR-208ENST00000589530 DCAF8L2P0C7V8 631 aa41.89■■■■■ 4.3
KDSR-208ENST00000589530 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.22
KDSR-208ENST00000589530 DNAJC5BQ9UF47 199 aa41.22■■■■■ 4.19
KDSR-208ENST00000589530 PABPN1Q86U42 306 aaKnown RBP eCLIP41.21■■■■■ 4.19
KDSR-208ENST00000589530 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
KDSR-208ENST00000589530 UNC13AQ9UPW8 1703 aa41.13■■■■■ 4.18
KDSR-208ENST00000589530 DCAF1Q9Y4B6 1507 aa41.02■■■■■ 4.16
KDSR-208ENST00000589530 BICRAQ9NZM4 1560 aa40.9■■■■■ 4.14
KDSR-208ENST00000589530 SCRIBQ14160 1630 aa40.48■■■■■ 4.07
KDSR-208ENST00000589530 SHROOM4Q9ULL8 1493 aa40.33■■■■■ 4.05
KDSR-208ENST00000589530 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
KDSR-208ENST00000589530 EIF4G1Q04637 1599 aaKnown RBP39.86■■■■□ 3.97
KDSR-208ENST00000589530 CECR2Q9BXF3 1484 aa39.74■■■■□ 3.95
KDSR-208ENST00000589530 NCAPD3P42695 1498 aa38.73■■■■□ 3.79
KDSR-208ENST00000589530 ATAD2BQ9ULI0 1458 aa38.65■■■■□ 3.78
KDSR-208ENST00000589530 SMARCA4P51532 1647 aa38.64■■■■□ 3.78
KDSR-208ENST00000589530 SMARCA2P51531 1590 aa38.52■■■■□ 3.76
KDSR-208ENST00000589530 BAZ1AQ9NRL2 1556 aaPredicted RBP38.51■■■■□ 3.76
KDSR-208ENST00000589530 HMGXB3Q12766 1538 aa38.41■■■■□ 3.74
KDSR-208ENST00000589530 MROH2BQ7Z745 1585 aa38.28■■■■□ 3.72
KDSR-208ENST00000589530 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
KDSR-208ENST00000589530 BAZ1BQ9UIG0 1483 aaKnown RBP38.27■■■■□ 3.72
KDSR-208ENST00000589530 ERCC6Q03468 1493 aa38.07■■■■□ 3.68
KDSR-208ENST00000589530 NESP48681 1621 aa38.01■■■■□ 3.68
KDSR-208ENST00000589530 CUX2O14529 1486 aa37.88■■■■□ 3.65
KDSR-208ENST00000589530 WIZO95785 1651 aa37.82■■■■□ 3.65
KDSR-208ENST00000589530 LAMC3Q9Y6N6 1575 aa37.76■■■■□ 3.63
KDSR-208ENST00000589530 RSF1Q96T23 1441 aaPredicted RBP37.62■■■■□ 3.61
KDSR-208ENST00000589530 DNAJC5Q9H3Z4 198 aa37.6■■■■□ 3.61
KDSR-208ENST00000589530 CADPSQ9ULU8 1353 aa37.58■■■■□ 3.61
KDSR-208ENST00000589530 PDS5BQ9NTI5 1447 aa37.57■■■■□ 3.6
KDSR-208ENST00000589530 THOC2Q8NI27 1593 aaKnown RBP37.51■■■■□ 3.59
KDSR-208ENST00000589530 KIF21AQ7Z4S6 1674 aa37.47■■■■□ 3.59
KDSR-208ENST00000589530 TOP2AP11388 1531 aaKnown RBP37.35■■■■□ 3.57
KDSR-208ENST00000589530 MRC2Q9UBG0 1479 aa37.2■■■■□ 3.55
KDSR-208ENST00000589530 CFTRP13569 1480 aa37.2■■■■□ 3.54
KDSR-208ENST00000589530 FANCD2Q9BXW9 1451 aa37.13■■■■□ 3.53
KDSR-208ENST00000589530 CEP164Q9UPV0 1460 aa37.12■■■■□ 3.53
KDSR-208ENST00000589530 WDR62O43379 1518 aa37.09■■■■□ 3.53
KDSR-208ENST00000589530 CCDC88BA6NC98 1476 aa36.98■■■■□ 3.51
KDSR-208ENST00000589530 URB2Q14146 1524 aaKnown RBP36.8■■■■□ 3.48
KDSR-208ENST00000589530 PRDM2Q13029 1718 aa36.75■■■■□ 3.47
KDSR-208ENST00000589530 TOPBP1Q92547 1522 aa36.45■■■■□ 3.43
KDSR-208ENST00000589530 ABCC8Q09428 1581 aa36.4■■■■□ 3.42
KDSR-208ENST00000589530 IFT140Q96RY7 1462 aa36.37■■■■□ 3.41
KDSR-208ENST00000589530 DNMBPQ6XZF7 1577 aa36.32■■■■□ 3.41
KDSR-208ENST00000589530 ZNF608Q9ULD9 1512 aaPredicted RBP36.31■■■■□ 3.4
KDSR-208ENST00000589530 OSCARQ8IYS5 282 aa36.29■■■■□ 3.4
KDSR-208ENST00000589530 SUPT5HO00267 1087 aaKnown RBP36.25■■■■□ 3.39
KDSR-208ENST00000589530 POLA1P09884 1462 aaPredicted RBP36.1■■■■□ 3.37
KDSR-208ENST00000589530 TARBP1Q13395 1621 aaKnown RBP36.09■■■■□ 3.37
KDSR-208ENST00000589530 TRIM41Q8WV44 630 aa36.07■■■■□ 3.36
KDSR-208ENST00000589530 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
KDSR-208ENST00000589530 AQRO60306 1485 aaKnown RBP eCLIP36.05■■■■□ 3.36
KDSR-208ENST00000589530 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
KDSR-208ENST00000589530 SOGA1O94964 1423 aa35.99■■■■□ 3.35
KDSR-208ENST00000589530 CUX1P39880 1505 aa35.94■■■■□ 3.34
KDSR-208ENST00000589530 FGD5Q6ZNL6 1462 aa35.92■■■■□ 3.34
KDSR-208ENST00000589530 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
KDSR-208ENST00000589530 FBLN2P98095 1184 aa35.77■■■■□ 3.32
KDSR-208ENST00000589530 CHD1O14646 1710 aa35.73■■■■□ 3.31
KDSR-208ENST00000589530 WDR97A6NE52 1622 aa35.7■■■■□ 3.31
KDSR-208ENST00000589530 RIMBP3CA6NJZ7 1639 aa35.7■■■■□ 3.31
KDSR-208ENST00000589530 RIMBP3BA6NNM3 1639 aa35.7■■■■□ 3.31
KDSR-208ENST00000589530 RIMBP3Q9UFD9 1639 aa35.7■■■■□ 3.31
KDSR-208ENST00000589530 SNAPC4Q5SXM2 1469 aa35.64■■■■□ 3.3
KDSR-208ENST00000589530 ARHGEF11O15085 1522 aa35.63■■■■□ 3.29
KDSR-208ENST00000589530 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
KDSR-208ENST00000589530 MAGI1Q96QZ7 1491 aaPredicted RBP35.55■■■■□ 3.28
KDSR-208ENST00000589530 CHMP7Q8WUX9 453 aaPredicted RBP35.55■■■■□ 3.28
KDSR-208ENST00000589530 ABCA10Q8WWZ4 1543 aa35.53■■■■□ 3.28
KDSR-208ENST00000589530 GAPVD1Q14C86 1478 aa35.53■■■■□ 3.28
KDSR-208ENST00000589530 WRNQ14191 1432 aaPredicted RBP eCLIP35.48■■■■□ 3.27
KDSR-208ENST00000589530 SYNJ2O15056 1496 aa35.44■■■■□ 3.26
KDSR-208ENST00000589530 CYB5RLQ6IPT4 315 aa35.43■■■■□ 3.26
KDSR-208ENST00000589530 TOP2BQ02880 1626 aa35.43■■■■□ 3.26
KDSR-208ENST00000589530 PBRM1Q86U86 1689 aa35.42■■■■□ 3.26
KDSR-208ENST00000589530 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
KDSR-208ENST00000589530 BIVM-ERCC5R4GMW8 1640 aa35.41■■■■□ 3.26
KDSR-208ENST00000589530 SYNJ1O43426 1573 aa35.4■■■■□ 3.26
KDSR-208ENST00000589530 CLASP1Q7Z460 1538 aa35.36■■■■□ 3.25
KDSR-208ENST00000589530 ARAP1Q96P48 1450 aa35.31■■■■□ 3.24
KDSR-208ENST00000589530 GRIN2AQ12879 1464 aa35.14■■■■□ 3.22
KDSR-208ENST00000589530 ADAMTS12P58397 1594 aa35.13■■■■□ 3.21
KDSR-208ENST00000589530 FHAD1B1AJZ9 1412 aa35.08■■■■□ 3.21
KDSR-208ENST00000589530 ERICH3Q5RHP9 1530 aa35.07■■■■□ 3.21
KDSR-208ENST00000589530 NUP160Q12769 1436 aa35.01■■■■□ 3.2
KDSR-208ENST00000589530 CEP170Q5SW79 1584 aa34.99■■■■□ 3.19
KDSR-208ENST00000589530 TRHP20396 242 aaPredicted RBP34.92■■■■□ 3.18
KDSR-208ENST00000589530 ERCC6L2Q5T890 1561 aa34.86■■■■□ 3.17
KDSR-208ENST00000589530 SHROOM2Q13796 1616 aa34.79■■■■□ 3.16
KDSR-208ENST00000589530 KIF27Q86VH2 1401 aa34.79■■■■□ 3.16
KDSR-208ENST00000589530 IGF1RP08069 1367 aa34.77■■■■□ 3.16
KDSR-208ENST00000589530 JPH4Q96JJ6 628 aa34.72■■■■□ 3.15
KDSR-208ENST00000589530 PRG4Q92954 1404 aaPredicted RBP34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms