RNA–Protein interactions for RNA: ENST00000589523.1

RFX2-212, Transcript of regulatory factor X2, humanhuman

TSL 3

Gene RFX2, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-212ENST00000589523 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
RFX2-212ENST00000589523 NISCHQ9Y2I1 1504 aa13.92□□□□□ -0.18
RFX2-212ENST00000589523 CHIC1Q5VXU3 224 aa13.85□□□□□ -0.19
RFX2-212ENST00000589523 SENP3Q9H4L4 574 aaPredicted RBP12.33□□□□□ -0.44
RFX2-212ENST00000589523 CCDC180Q9P1Z9 1646 aa12.3□□□□□ -0.44
RFX2-212ENST00000589523 ABCC9O60706 1549 aa12.27□□□□□ -0.45
RFX2-212ENST00000589523 PHF23Q9BUL5 403 aaPredicted RBP12.21□□□□□ -0.45
RFX2-212ENST00000589523 NACADO15069 1562 aa11.7□□□□□ -0.54
RFX2-212ENST00000589523 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
RFX2-212ENST00000589523 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
RFX2-212ENST00000589523 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.54
RFX2-212ENST00000589523 ZCCHC6Q5VYS8 1495 aaKnown RBP11.56□□□□□ -0.56
RFX2-212ENST00000589523 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
RFX2-212ENST00000589523 DCAF1Q9Y4B6 1507 aa11.54□□□□□ -0.56
RFX2-212ENST00000589523 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
RFX2-212ENST00000589523 FOXD1Q16676 465 aa11.49□□□□□ -0.57
RFX2-212ENST00000589523 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
RFX2-212ENST00000589523 UNC13AQ9UPW8 1703 aa11.3□□□□□ -0.6
RFX2-212ENST00000589523 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
RFX2-212ENST00000589523 SCRIBQ14160 1630 aa11.21□□□□□ -0.61
RFX2-212ENST00000589523 PLPPR3Q6T4P5 718 aa11.13□□□□□ -0.63
RFX2-212ENST00000589523 EIF4G1Q04637 1599 aaKnown RBP11.09□□□□□ -0.63
RFX2-212ENST00000589523 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
RFX2-212ENST00000589523 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
RFX2-212ENST00000589523 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
RFX2-212ENST00000589523 ADRA2BP18089 450 aa10.84□□□□□ -0.67
RFX2-212ENST00000589523 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
RFX2-212ENST00000589523 PPP6R1Q9UPN7 881 aa10.83□□□□□ -0.68
RFX2-212ENST00000589523 PIAS4Q8N2W9 510 aaPredicted RBP10.79□□□□□ -0.68
RFX2-212ENST00000589523 SMARCA4P51532 1647 aa10.76□□□□□ -0.69
RFX2-212ENST00000589523 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
RFX2-212ENST00000589523 SMARCA2P51531 1590 aa10.74□□□□□ -0.69
RFX2-212ENST00000589523 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
RFX2-212ENST00000589523 PEG3Q9GZU2 1588 aa10.73□□□□□ -0.69
RFX2-212ENST00000589523 MROH2BQ7Z745 1585 aa10.72□□□□□ -0.69
RFX2-212ENST00000589523 MSH5O43196 834 aa10.7□□□□□ -0.7
RFX2-212ENST00000589523 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
RFX2-212ENST00000589523 RSF1Q96T23 1441 aaPredicted RBP10.6□□□□□ -0.71
RFX2-212ENST00000589523 NESP48681 1621 aa10.59□□□□□ -0.71
RFX2-212ENST00000589523 CADPSQ9ULU8 1353 aa10.55□□□□□ -0.72
RFX2-212ENST00000589523 CUX2O14529 1486 aa10.55□□□□□ -0.72
RFX2-212ENST00000589523 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
RFX2-212ENST00000589523 WIZO95785 1651 aa10.5□□□□□ -0.73
RFX2-212ENST00000589523 LAMC3Q9Y6N6 1575 aa10.5□□□□□ -0.73
RFX2-212ENST00000589523 PDS5BQ9NTI5 1447 aa10.5□□□□□ -0.73
RFX2-212ENST00000589523 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
RFX2-212ENST00000589523 CFTRP13569 1480 aa10.45□□□□□ -0.74
RFX2-212ENST00000589523 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
RFX2-212ENST00000589523 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
RFX2-212ENST00000589523 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
RFX2-212ENST00000589523 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
RFX2-212ENST00000589523 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
RFX2-212ENST00000589523 WDR62O43379 1518 aa10.33□□□□□ -0.76
RFX2-212ENST00000589523 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
RFX2-212ENST00000589523 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
RFX2-212ENST00000589523 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
RFX2-212ENST00000589523 POTEDQ86YR6 584 aa10.27□□□□□ -0.77
RFX2-212ENST00000589523 ABCC8Q09428 1581 aa10.18□□□□□ -0.78
RFX2-212ENST00000589523 TOPBP1Q92547 1522 aa10.17□□□□□ -0.78
RFX2-212ENST00000589523 SUPT5HO00267 1087 aaKnown RBP10.16□□□□□ -0.78
RFX2-212ENST00000589523 IFT140Q96RY7 1462 aa10.16□□□□□ -0.78
RFX2-212ENST00000589523 OSCARQ8IYS5 282 aa10.14□□□□□ -0.79
RFX2-212ENST00000589523 ZNF608Q9ULD9 1512 aaPredicted RBP10.13□□□□□ -0.79
RFX2-212ENST00000589523 DNMBPQ6XZF7 1577 aa10.11□□□□□ -0.79
RFX2-212ENST00000589523 POLA1P09884 1462 aaPredicted RBP10.1□□□□□ -0.79
RFX2-212ENST00000589523 AQRO60306 1485 aaKnown RBP eCLIP10.08□□□□□ -0.8
RFX2-212ENST00000589523 SOGA1O94964 1423 aa10.07□□□□□ -0.8
RFX2-212ENST00000589523 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
RFX2-212ENST00000589523 RAD54L2Q9Y4B4 1467 aa10.06□□□□□ -0.8
RFX2-212ENST00000589523 TARBP1Q13395 1621 aaKnown RBP10.06□□□□□ -0.8
RFX2-212ENST00000589523 CUX1P39880 1505 aa10.05□□□□□ -0.8
RFX2-212ENST00000589523 TDRD9Q8NDG6 1382 aaKnown RBP10.04□□□□□ -0.8
RFX2-212ENST00000589523 FGD5Q6ZNL6 1462 aa10.02□□□□□ -0.81
RFX2-212ENST00000589523 EIF4G3O43432 1585 aaKnown RBP9.98□□□□□ -0.81
RFX2-212ENST00000589523 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
RFX2-212ENST00000589523 ABCA10Q8WWZ4 1543 aa9.96□□□□□ -0.82
RFX2-212ENST00000589523 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
RFX2-212ENST00000589523 GRIN2BQ13224 1484 aa9.95□□□□□ -0.82
RFX2-212ENST00000589523 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
RFX2-212ENST00000589523 FBLN2P98095 1184 aa9.94□□□□□ -0.82
RFX2-212ENST00000589523 GAPVD1Q14C86 1478 aa9.93□□□□□ -0.82
RFX2-212ENST00000589523 MAPK8IP2Q13387 824 aaPredicted RBP9.93□□□□□ -0.82
RFX2-212ENST00000589523 CHMP7Q8WUX9 453 aaPredicted RBP9.93□□□□□ -0.82
RFX2-212ENST00000589523 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
RFX2-212ENST00000589523 MAGI1Q96QZ7 1491 aaPredicted RBP9.91□□□□□ -0.82
RFX2-212ENST00000589523 ARHGEF11O15085 1522 aa9.9□□□□□ -0.82
RFX2-212ENST00000589523 SYNJ2O15056 1496 aa9.9□□□□□ -0.83
RFX2-212ENST00000589523 SCAF1Q9H7N4 1312 aaKnown RBP9.89□□□□□ -0.83
RFX2-212ENST00000589523 TOP2BQ02880 1626 aa9.89□□□□□ -0.83
RFX2-212ENST00000589523 CYB5RLQ6IPT4 315 aa9.87□□□□□ -0.83
RFX2-212ENST00000589523 SYNJ1O43426 1573 aa9.87□□□□□ -0.83
RFX2-212ENST00000589523 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
RFX2-212ENST00000589523 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
RFX2-212ENST00000589523 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
RFX2-212ENST00000589523 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
RFX2-212ENST00000589523 ABCA5Q8WWZ7 1642 aa9.85□□□□□ -0.83
RFX2-212ENST00000589523 BIVM-ERCC5R4GMW8 1640 aa9.85□□□□□ -0.83
RFX2-212ENST00000589523 ARAP1Q96P48 1450 aa9.83□□□□□ -0.84
RFX2-212ENST00000589523 FHAD1B1AJZ9 1412 aa9.82□□□□□ -0.84
RFX2-212ENST00000589523 NUP160Q12769 1436 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms