RNA–Protein interactions for RNA: ENST00000589506.1

RAD51D-217, Transcript of RAD51 paralog D, humanhuman

TSL 4

Gene RAD51D, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-217ENST00000589506 NISCHQ9Y2I1 1504 aa49.5■■■■■ 5.52
RAD51D-217ENST00000589506 ABCC9O60706 1549 aa44.72■■■■■ 4.75
RAD51D-217ENST00000589506 CCDC180Q9P1Z9 1646 aa44.49■■■■■ 4.71
RAD51D-217ENST00000589506 RB1CC1Q8TDY2 1594 aa42.45■■■■■ 4.39
RAD51D-217ENST00000589506 DNAJC5BQ9UF47 199 aa42.25■■■■■ 4.35
RAD51D-217ENST00000589506 NACADO15069 1562 aa42.13■■■■■ 4.33
RAD51D-217ENST00000589506 DCAF8L2P0C7V8 631 aa41.89■■■■■ 4.3
RAD51D-217ENST00000589506 PABPN1Q86U42 306 aaKnown RBP eCLIP41.64■■■■■ 4.26
RAD51D-217ENST00000589506 UNC13AQ9UPW8 1703 aa41.57■■■■■ 4.25
RAD51D-217ENST00000589506 MYO15BQ96JP2 1530 aa41.48■■■■■ 4.23
RAD51D-217ENST00000589506 BICRAQ9NZM4 1560 aa41.29■■■■■ 4.2
RAD51D-217ENST00000589506 ZCCHC6Q5VYS8 1495 aaKnown RBP40.96■■■■■ 4.15
RAD51D-217ENST00000589506 DCAF1Q9Y4B6 1507 aa40.87■■■■■ 4.13
RAD51D-217ENST00000589506 SHROOM4Q9ULL8 1493 aa40.61■■■■■ 4.09
RAD51D-217ENST00000589506 SCRIBQ14160 1630 aa40.51■■■■■ 4.08
RAD51D-217ENST00000589506 CC2D2AQ9P2K1 1620 aa40.4■■■■■ 4.06
RAD51D-217ENST00000589506 CECR2Q9BXF3 1484 aa40.3■■■■■ 4.04
RAD51D-217ENST00000589506 EIF4G1Q04637 1599 aaKnown RBP40.25■■■■■ 4.03
RAD51D-217ENST00000589506 DNAJC5Q9H3Z4 198 aa38.94■■■■□ 3.82
RAD51D-217ENST00000589506 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
RAD51D-217ENST00000589506 ATAD2BQ9ULI0 1458 aa38.76■■■■□ 3.8
RAD51D-217ENST00000589506 SMARCA4P51532 1647 aa38.64■■■■□ 3.78
RAD51D-217ENST00000589506 CUX2O14529 1486 aa38.61■■■■□ 3.77
RAD51D-217ENST00000589506 SMARCA2P51531 1590 aa38.61■■■■□ 3.77
RAD51D-217ENST00000589506 ERCC6Q03468 1493 aa38.58■■■■□ 3.77
RAD51D-217ENST00000589506 HMGXB3Q12766 1538 aa38.56■■■■□ 3.76
RAD51D-217ENST00000589506 BAZ1AQ9NRL2 1556 aaPredicted RBP38.4■■■■□ 3.74
RAD51D-217ENST00000589506 NESP48681 1621 aa38.38■■■■□ 3.73
RAD51D-217ENST00000589506 BAZ1BQ9UIG0 1483 aaKnown RBP38.33■■■■□ 3.73
RAD51D-217ENST00000589506 PEG3Q9GZU2 1588 aa38.29■■■■□ 3.72
RAD51D-217ENST00000589506 MROH2BQ7Z745 1585 aa38.15■■■■□ 3.7
RAD51D-217ENST00000589506 LAMC3Q9Y6N6 1575 aa38.04■■■■□ 3.68
RAD51D-217ENST00000589506 THOC2Q8NI27 1593 aaKnown RBP38■■■■□ 3.67
RAD51D-217ENST00000589506 KIF21AQ7Z4S6 1674 aa37.87■■■■□ 3.65
RAD51D-217ENST00000589506 PDS5BQ9NTI5 1447 aa37.83■■■■□ 3.65
RAD51D-217ENST00000589506 CADPSQ9ULU8 1353 aa37.71■■■■□ 3.63
RAD51D-217ENST00000589506 WIZO95785 1651 aa37.69■■■■□ 3.62
RAD51D-217ENST00000589506 MRC2Q9UBG0 1479 aa37.51■■■■□ 3.59
RAD51D-217ENST00000589506 WDR62O43379 1518 aa37.42■■■■□ 3.58
RAD51D-217ENST00000589506 CEP164Q9UPV0 1460 aa37.31■■■■□ 3.56
RAD51D-217ENST00000589506 RSF1Q96T23 1441 aaPredicted RBP37.28■■■■□ 3.56
RAD51D-217ENST00000589506 FANCD2Q9BXW9 1451 aa37.26■■■■□ 3.56
RAD51D-217ENST00000589506 CFTRP13569 1480 aa37.24■■■■□ 3.55
RAD51D-217ENST00000589506 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
RAD51D-217ENST00000589506 TRIM41Q8WV44 630 aa37.08■■■■□ 3.53
RAD51D-217ENST00000589506 URB2Q14146 1524 aaKnown RBP37■■■■□ 3.51
RAD51D-217ENST00000589506 OSCARQ8IYS5 282 aa36.87■■■■□ 3.49
RAD51D-217ENST00000589506 PRDM2Q13029 1718 aa36.85■■■■□ 3.49
RAD51D-217ENST00000589506 CCDC88BA6NC98 1476 aa36.77■■■■□ 3.48
RAD51D-217ENST00000589506 IFT140Q96RY7 1462 aa36.58■■■■□ 3.45
RAD51D-217ENST00000589506 ZNF608Q9ULD9 1512 aaPredicted RBP36.58■■■■□ 3.45
RAD51D-217ENST00000589506 TOPBP1Q92547 1522 aa36.54■■■■□ 3.44
RAD51D-217ENST00000589506 ABCC8Q09428 1581 aa36.44■■■■□ 3.42
RAD51D-217ENST00000589506 RIMBP3CA6NJZ7 1639 aa36.39■■■■□ 3.42
RAD51D-217ENST00000589506 RIMBP3BA6NNM3 1639 aa36.39■■■■□ 3.42
RAD51D-217ENST00000589506 RIMBP3Q9UFD9 1639 aa36.39■■■■□ 3.42
RAD51D-217ENST00000589506 DNMBPQ6XZF7 1577 aa36.37■■■■□ 3.41
RAD51D-217ENST00000589506 EIF4G3O43432 1585 aaKnown RBP36.32■■■■□ 3.41
RAD51D-217ENST00000589506 TARBP1Q13395 1621 aaKnown RBP36.26■■■■□ 3.39
RAD51D-217ENST00000589506 ARHGEF11O15085 1522 aa36.24■■■■□ 3.39
RAD51D-217ENST00000589506 AQRO60306 1485 aaKnown RBP eCLIP36.23■■■■□ 3.39
RAD51D-217ENST00000589506 POLA1P09884 1462 aaPredicted RBP36.16■■■■□ 3.38
RAD51D-217ENST00000589506 CHD1O14646 1710 aa36.14■■■■□ 3.38
RAD51D-217ENST00000589506 RAD54L2Q9Y4B4 1467 aa36.05■■■■□ 3.36
RAD51D-217ENST00000589506 CYB5RLQ6IPT4 315 aa36.03■■■■□ 3.36
RAD51D-217ENST00000589506 SOGA1O94964 1423 aa36■■■■□ 3.35
RAD51D-217ENST00000589506 FBLN2P98095 1184 aa36■■■■□ 3.35
RAD51D-217ENST00000589506 TDRD9Q8NDG6 1382 aaKnown RBP35.97■■■■□ 3.35
RAD51D-217ENST00000589506 FGD5Q6ZNL6 1462 aa35.89■■■■□ 3.34
RAD51D-217ENST00000589506 ARAP1Q96P48 1450 aa35.87■■■■□ 3.33
RAD51D-217ENST00000589506 CUX1P39880 1505 aa35.84■■■■□ 3.33
RAD51D-217ENST00000589506 WDR97A6NE52 1622 aa35.82■■■■□ 3.32
RAD51D-217ENST00000589506 SNAPC4Q5SXM2 1469 aa35.8■■■■□ 3.32
RAD51D-217ENST00000589506 CHMP7Q8WUX9 453 aaPredicted RBP35.72■■■■□ 3.31
RAD51D-217ENST00000589506 CLASP1Q7Z460 1538 aa35.7■■■■□ 3.31
RAD51D-217ENST00000589506 MAGI1Q96QZ7 1491 aaPredicted RBP35.7■■■■□ 3.31
RAD51D-217ENST00000589506 GRIN2BQ13224 1484 aa35.69■■■■□ 3.3
RAD51D-217ENST00000589506 TRHP20396 242 aaPredicted RBP35.66■■■■□ 3.3
RAD51D-217ENST00000589506 SYNJ1O43426 1573 aa35.63■■■■□ 3.29
RAD51D-217ENST00000589506 SYNJ2O15056 1496 aa35.6■■■■□ 3.29
RAD51D-217ENST00000589506 GAPVD1Q14C86 1478 aa35.54■■■■□ 3.28
RAD51D-217ENST00000589506 PBRM1Q86U86 1689 aa35.54■■■■□ 3.28
RAD51D-217ENST00000589506 ABCA10Q8WWZ4 1543 aa35.47■■■■□ 3.27
RAD51D-217ENST00000589506 SUPT5HO00267 1087 aaKnown RBP35.45■■■■□ 3.27
RAD51D-217ENST00000589506 ABCA5Q8WWZ7 1642 aa35.43■■■■□ 3.26
RAD51D-217ENST00000589506 WRNQ14191 1432 aaPredicted RBP eCLIP35.28■■■■□ 3.24
RAD51D-217ENST00000589506 GRIN2AQ12879 1464 aa35.23■■■■□ 3.23
RAD51D-217ENST00000589506 BIVM-ERCC5R4GMW8 1640 aa35.21■■■■□ 3.23
RAD51D-217ENST00000589506 TOP2BQ02880 1626 aa35.19■■■■□ 3.22
RAD51D-217ENST00000589506 ADAMTS12P58397 1594 aa35.17■■■■□ 3.22
RAD51D-217ENST00000589506 ERCC6L2Q5T890 1561 aa35.16■■■■□ 3.22
RAD51D-217ENST00000589506 NUP160Q12769 1436 aa35.15■■■■□ 3.22
RAD51D-217ENST00000589506 CEP170Q5SW79 1584 aa35.13■■■■□ 3.21
RAD51D-217ENST00000589506 FHAD1B1AJZ9 1412 aa35.08■■■■□ 3.21
RAD51D-217ENST00000589506 ERICH3Q5RHP9 1530 aa35.02■■■■□ 3.2
RAD51D-217ENST00000589506 SHROOM2Q13796 1616 aa35.01■■■■□ 3.19
RAD51D-217ENST00000589506 JPH4Q96JJ6 628 aa34.82■■■■□ 3.16
RAD51D-217ENST00000589506 PRG4Q92954 1404 aaPredicted RBP34.81■■■■□ 3.16
RAD51D-217ENST00000589506 AEBP2Q6ZN18 517 aaPredicted RBP34.76■■■■□ 3.16
RAD51D-217ENST00000589506 KIF13AQ9H1H9 1805 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms