RNA–Protein interactions for RNA: ENST00000589469.5

PSME3-209, Transcript of proteasome activator subunit 3, humanhuman

TSL 3

Gene PSME3, Length 733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-209ENST00000589469 NISCHQ9Y2I1 1504 aa48.92■■■■■ 5.42
PSME3-209ENST00000589469 CCDC180Q9P1Z9 1646 aa43.53■■■■■ 4.56
PSME3-209ENST00000589469 ABCC9O60706 1549 aa42.77■■■■■ 4.44
PSME3-209ENST00000589469 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
PSME3-209ENST00000589469 NACADO15069 1562 aa40.99■■■■■ 4.15
PSME3-209ENST00000589469 DCAF8L2P0C7V8 631 aa40.96■■■■■ 4.15
PSME3-209ENST00000589469 ZCCHC6Q5VYS8 1495 aaKnown RBP40.73■■■■■ 4.11
PSME3-209ENST00000589469 MYO15BQ96JP2 1530 aa40.71■■■■■ 4.11
PSME3-209ENST00000589469 DCAF1Q9Y4B6 1507 aa40.47■■■■■ 4.07
PSME3-209ENST00000589469 UNC13AQ9UPW8 1703 aa40.02■■■■■ 4
PSME3-209ENST00000589469 PABPN1Q86U42 306 aaKnown RBP eCLIP39.95■■■■□ 3.99
PSME3-209ENST00000589469 BICRAQ9NZM4 1560 aa39.8■■■■□ 3.96
PSME3-209ENST00000589469 SCRIBQ14160 1630 aa39.73■■■■□ 3.95
PSME3-209ENST00000589469 DNAJC5BQ9UF47 199 aa39.69■■■■□ 3.94
PSME3-209ENST00000589469 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
PSME3-209ENST00000589469 EIF4G1Q04637 1599 aaKnown RBP38.79■■■■□ 3.8
PSME3-209ENST00000589469 CC2D2AQ9P2K1 1620 aa38.66■■■■□ 3.78
PSME3-209ENST00000589469 CECR2Q9BXF3 1484 aa38.46■■■■□ 3.75
PSME3-209ENST00000589469 SMARCA4P51532 1647 aa37.98■■■■□ 3.67
PSME3-209ENST00000589469 BAZ1AQ9NRL2 1556 aaPredicted RBP37.93■■■■□ 3.66
PSME3-209ENST00000589469 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
PSME3-209ENST00000589469 ATAD2BQ9ULI0 1458 aa37.84■■■■□ 3.65
PSME3-209ENST00000589469 SMARCA2P51531 1590 aa37.79■■■■□ 3.64
PSME3-209ENST00000589469 MROH2BQ7Z745 1585 aa37.69■■■■□ 3.62
PSME3-209ENST00000589469 HMGXB3Q12766 1538 aa37.63■■■■□ 3.61
PSME3-209ENST00000589469 PEG3Q9GZU2 1588 aa37.61■■■■□ 3.61
PSME3-209ENST00000589469 BAZ1BQ9UIG0 1483 aaKnown RBP37.53■■■■□ 3.6
PSME3-209ENST00000589469 WIZO95785 1651 aa37.25■■■■□ 3.55
PSME3-209ENST00000589469 RSF1Q96T23 1441 aaPredicted RBP37.23■■■■□ 3.55
PSME3-209ENST00000589469 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
PSME3-209ENST00000589469 NESP48681 1621 aa36.96■■■■□ 3.51
PSME3-209ENST00000589469 ERCC6Q03468 1493 aa36.91■■■■□ 3.5
PSME3-209ENST00000589469 TOP2AP11388 1531 aaKnown RBP36.9■■■■□ 3.5
PSME3-209ENST00000589469 LAMC3Q9Y6N6 1575 aa36.85■■■■□ 3.49
PSME3-209ENST00000589469 CADPSQ9ULU8 1353 aa36.74■■■■□ 3.47
PSME3-209ENST00000589469 PDS5BQ9NTI5 1447 aa36.65■■■■□ 3.46
PSME3-209ENST00000589469 CUX2O14529 1486 aa36.56■■■■□ 3.44
PSME3-209ENST00000589469 CFTRP13569 1480 aa36.48■■■■□ 3.43
PSME3-209ENST00000589469 KIF21AQ7Z4S6 1674 aa36.47■■■■□ 3.43
PSME3-209ENST00000589469 CCDC88BA6NC98 1476 aa36.45■■■■□ 3.43
PSME3-209ENST00000589469 THOC2Q8NI27 1593 aaKnown RBP36.42■■■■□ 3.42
PSME3-209ENST00000589469 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
PSME3-209ENST00000589469 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
PSME3-209ENST00000589469 MRC2Q9UBG0 1479 aa36.27■■■■□ 3.4
PSME3-209ENST00000589469 SUPT5HO00267 1087 aaKnown RBP36.19■■■■□ 3.38
PSME3-209ENST00000589469 WDR62O43379 1518 aa36.13■■■■□ 3.38
PSME3-209ENST00000589469 PRDM2Q13029 1718 aa36.09■■■■□ 3.37
PSME3-209ENST00000589469 URB2Q14146 1524 aaKnown RBP35.94■■■■□ 3.34
PSME3-209ENST00000589469 ABCC8Q09428 1581 aa35.71■■■■□ 3.31
PSME3-209ENST00000589469 TOPBP1Q92547 1522 aa35.7■■■■□ 3.31
PSME3-209ENST00000589469 DNMBPQ6XZF7 1577 aa35.65■■■■□ 3.3
PSME3-209ENST00000589469 IFT140Q96RY7 1462 aa35.54■■■■□ 3.28
PSME3-209ENST00000589469 POLA1P09884 1462 aaPredicted RBP35.4■■■■□ 3.26
PSME3-209ENST00000589469 CUX1P39880 1505 aa35.37■■■■□ 3.25
PSME3-209ENST00000589469 ZNF608Q9ULD9 1512 aaPredicted RBP35.37■■■■□ 3.25
PSME3-209ENST00000589469 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
PSME3-209ENST00000589469 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
PSME3-209ENST00000589469 SOGA1O94964 1423 aa35.26■■■■□ 3.24
PSME3-209ENST00000589469 RAD54L2Q9Y4B4 1467 aa35.24■■■■□ 3.23
PSME3-209ENST00000589469 EIF4G3O43432 1585 aaKnown RBP35.21■■■■□ 3.23
PSME3-209ENST00000589469 TRIM41Q8WV44 630 aa35.21■■■■□ 3.23
PSME3-209ENST00000589469 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.224e-7■■■■□ 21.8
PSME3-209ENST00000589469 WRNQ14191 1432 aaPredicted RBP eCLIP35.13■■■■□ 3.21
PSME3-209ENST00000589469 TDRD9Q8NDG6 1382 aaKnown RBP35.08■■■■□ 3.21
PSME3-209ENST00000589469 WDR97A6NE52 1622 aa35.04■■■■□ 3.2
PSME3-209ENST00000589469 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
PSME3-209ENST00000589469 OSCARQ8IYS5 282 aa35.02■■■■□ 3.2
PSME3-209ENST00000589469 SYNJ1O43426 1573 aa35■■■■□ 3.19
PSME3-209ENST00000589469 BIVM-ERCC5R4GMW8 1640 aa35■■■■□ 3.19
PSME3-209ENST00000589469 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
PSME3-209ENST00000589469 GRIN2BQ13224 1484 aa34.87■■■■□ 3.17
PSME3-209ENST00000589469 GAPVD1Q14C86 1478 aa34.85■■■■□ 3.17
PSME3-209ENST00000589469 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
PSME3-209ENST00000589469 MAGI1Q96QZ7 1491 aaPredicted RBP34.79■■■■□ 3.16
PSME3-209ENST00000589469 FBLN2P98095 1184 aa34.79■■■■□ 3.16
PSME3-209ENST00000589469 ABCA5Q8WWZ7 1642 aa34.79■■■■□ 3.16
PSME3-209ENST00000589469 CHD1O14646 1710 aa34.75■■■■□ 3.15
PSME3-209ENST00000589469 PBRM1Q86U86 1689 aa34.72■■■■□ 3.15
PSME3-209ENST00000589469 CHMP7Q8WUX9 453 aaPredicted RBP34.67■■■■□ 3.14
PSME3-209ENST00000589469 SYNJ2O15056 1496 aa34.66■■■■□ 3.14
PSME3-209ENST00000589469 ERICH3Q5RHP9 1530 aa34.52■■■■□ 3.12
PSME3-209ENST00000589469 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
PSME3-209ENST00000589469 FHAD1B1AJZ9 1412 aa34.46■■■■□ 3.11
PSME3-209ENST00000589469 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
PSME3-209ENST00000589469 RIMBP3CA6NJZ7 1639 aa34.43■■■■□ 3.1
PSME3-209ENST00000589469 RIMBP3BA6NNM3 1639 aa34.43■■■■□ 3.1
PSME3-209ENST00000589469 RIMBP3Q9UFD9 1639 aa34.43■■■■□ 3.1
PSME3-209ENST00000589469 CLASP1Q7Z460 1538 aa34.42■■■■□ 3.1
PSME3-209ENST00000589469 GRIN2AQ12879 1464 aa34.41■■■■□ 3.1
PSME3-209ENST00000589469 KIF27Q86VH2 1401 aa34.41■■■■□ 3.1
PSME3-209ENST00000589469 NUP160Q12769 1436 aa34.27■■■■□ 3.08
PSME3-209ENST00000589469 IGF1RP08069 1367 aa34.26■■■■□ 3.08
PSME3-209ENST00000589469 CEP170Q5SW79 1584 aa34.23■■■■□ 3.07
PSME3-209ENST00000589469 CUL7Q14999 1698 aa34.16■■■■□ 3.06
PSME3-209ENST00000589469 ARAP1Q96P48 1450 aa34.16■■■■□ 3.06
PSME3-209ENST00000589469 CYB5RLQ6IPT4 315 aa34.14■■■■□ 3.06
PSME3-209ENST00000589469 CARMIL1Q5VZK9 1371 aa34.08■■■■□ 3.05
PSME3-209ENST00000589469 RUSC2Q8N2Y8 1516 aa34■■■■□ 3.03
PSME3-209ENST00000589469 SHROOM2Q13796 1616 aa33.98■■■■□ 3.03
PSME3-209ENST00000589469 JPH4Q96JJ6 628 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms