RNA–Protein interactions for RNA: ENST00000589415.1

TXNL1-209, Transcript of thioredoxin like 1, humanhuman

TSL 5

Gene TXNL1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNL1-209ENST00000589415 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
TXNL1-209ENST00000589415 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.86
TXNL1-209ENST00000589415 ABCC9O60706 1549 aa26.6■■□□□ 1.85
TXNL1-209ENST00000589415 RB1CC1Q8TDY2 1594 aa25.36■■□□□ 1.65
TXNL1-209ENST00000589415 NACADO15069 1562 aa25.22■■□□□ 1.63
TXNL1-209ENST00000589415 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
TXNL1-209ENST00000589415 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
TXNL1-209ENST00000589415 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
TXNL1-209ENST00000589415 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
TXNL1-209ENST00000589415 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
TXNL1-209ENST00000589415 ZCCHC6Q5VYS8 1495 aaKnown RBP24.73■■□□□ 1.55
TXNL1-209ENST00000589415 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
TXNL1-209ENST00000589415 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
TXNL1-209ENST00000589415 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
TXNL1-209ENST00000589415 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
TXNL1-209ENST00000589415 CC2D2AQ9P2K1 1620 aa24.03■■□□□ 1.44
TXNL1-209ENST00000589415 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
TXNL1-209ENST00000589415 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
TXNL1-209ENST00000589415 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
TXNL1-209ENST00000589415 SMARCA4P51532 1647 aa23.24■■□□□ 1.31
TXNL1-209ENST00000589415 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
TXNL1-209ENST00000589415 SMARCA2P51531 1590 aa23.17■■□□□ 1.3
TXNL1-209ENST00000589415 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
TXNL1-209ENST00000589415 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
TXNL1-209ENST00000589415 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
TXNL1-209ENST00000589415 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
TXNL1-209ENST00000589415 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
TXNL1-209ENST00000589415 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
TXNL1-209ENST00000589415 NESP48681 1621 aa22.89■■□□□ 1.25
TXNL1-209ENST00000589415 CUX2O14529 1486 aa22.85■■□□□ 1.25
TXNL1-209ENST00000589415 LAMC3Q9Y6N6 1575 aa22.74■■□□□ 1.23
TXNL1-209ENST00000589415 WIZO95785 1651 aa22.74■■□□□ 1.23
TXNL1-209ENST00000589415 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
TXNL1-209ENST00000589415 THOC2Q8NI27 1593 aaKnown RBP22.61■■□□□ 1.21
TXNL1-209ENST00000589415 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
TXNL1-209ENST00000589415 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
TXNL1-209ENST00000589415 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
TXNL1-209ENST00000589415 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
TXNL1-209ENST00000589415 TOP2AP11388 1531 aaKnown RBP22.43■■□□□ 1.18
TXNL1-209ENST00000589415 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
TXNL1-209ENST00000589415 CFTRP13569 1480 aa22.35■■□□□ 1.17
TXNL1-209ENST00000589415 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
TXNL1-209ENST00000589415 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
TXNL1-209ENST00000589415 WDR62O43379 1518 aa22.32■■□□□ 1.16
TXNL1-209ENST00000589415 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.14
TXNL1-209ENST00000589415 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
TXNL1-209ENST00000589415 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
TXNL1-209ENST00000589415 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
TXNL1-209ENST00000589415 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
TXNL1-209ENST00000589415 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
TXNL1-209ENST00000589415 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
TXNL1-209ENST00000589415 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
TXNL1-209ENST00000589415 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
TXNL1-209ENST00000589415 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
TXNL1-209ENST00000589415 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
TXNL1-209ENST00000589415 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
TXNL1-209ENST00000589415 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
TXNL1-209ENST00000589415 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
TXNL1-209ENST00000589415 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.06
TXNL1-209ENST00000589415 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.05
TXNL1-209ENST00000589415 SOGA1O94964 1423 aa21.63■■□□□ 1.05
TXNL1-209ENST00000589415 CUX1P39880 1505 aa21.59■■□□□ 1.05
TXNL1-209ENST00000589415 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.05
TXNL1-209ENST00000589415 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
TXNL1-209ENST00000589415 CHD1O14646 1710 aa21.55■■□□□ 1.04
TXNL1-209ENST00000589415 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
TXNL1-209ENST00000589415 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
TXNL1-209ENST00000589415 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
TXNL1-209ENST00000589415 FBLN2P98095 1184 aa21.53■■□□□ 1.04
TXNL1-209ENST00000589415 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
TXNL1-209ENST00000589415 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
TXNL1-209ENST00000589415 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
TXNL1-209ENST00000589415 GRIN2BQ13224 1484 aa21.4■■□□□ 1.02
TXNL1-209ENST00000589415 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.01
TXNL1-209ENST00000589415 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
TXNL1-209ENST00000589415 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
TXNL1-209ENST00000589415 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
TXNL1-209ENST00000589415 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
TXNL1-209ENST00000589415 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
TXNL1-209ENST00000589415 SYNJ2O15056 1496 aa21.32■■□□□ 1
TXNL1-209ENST00000589415 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
TXNL1-209ENST00000589415 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
TXNL1-209ENST00000589415 SYNJ1O43426 1573 aa21.29■■□□□ 1
TXNL1-209ENST00000589415 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
TXNL1-209ENST00000589415 ARAP1Q96P48 1450 aa21.28■■□□□ 1
TXNL1-209ENST00000589415 TOP2BQ02880 1626 aa21.28■■□□□ 1
TXNL1-209ENST00000589415 BIVM-ERCC5R4GMW8 1640 aa21.28■■□□□ 1
TXNL1-209ENST00000589415 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
TXNL1-209ENST00000589415 ADAMTS12P58397 1594 aa21.11■□□□□ 0.97
TXNL1-209ENST00000589415 TRHP20396 242 aaPredicted RBP21.09■□□□□ 0.97
TXNL1-209ENST00000589415 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
TXNL1-209ENST00000589415 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
TXNL1-209ENST00000589415 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
TXNL1-209ENST00000589415 NUP160Q12769 1436 aa21.04■□□□□ 0.96
TXNL1-209ENST00000589415 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
TXNL1-209ENST00000589415 SHROOM2Q13796 1616 aa20.94■□□□□ 0.94
TXNL1-209ENST00000589415 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
TXNL1-209ENST00000589415 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
TXNL1-209ENST00000589415 IGF1RP08069 1367 aa20.86■□□□□ 0.93
TXNL1-209ENST00000589415 PRG4Q92954 1404 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms