RNA–Protein interactions for RNA: ENST00000589254.1

USP36-215, Transcript of ubiquitin specific peptidase 36, humanhuman

TSL 3

Gene USP36, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP36-215ENST00000589254 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
USP36-215ENST00000589254 ABCC9O60706 1549 aa27.1■■□□□ 1.93
USP36-215ENST00000589254 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
USP36-215ENST00000589254 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
USP36-215ENST00000589254 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
USP36-215ENST00000589254 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.62
USP36-215ENST00000589254 NACADO15069 1562 aa25.1■■□□□ 1.61
USP36-215ENST00000589254 UNC13AQ9UPW8 1703 aa25.1■■□□□ 1.61
USP36-215ENST00000589254 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
USP36-215ENST00000589254 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
USP36-215ENST00000589254 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
USP36-215ENST00000589254 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
USP36-215ENST00000589254 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
USP36-215ENST00000589254 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
USP36-215ENST00000589254 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
USP36-215ENST00000589254 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
USP36-215ENST00000589254 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
USP36-215ENST00000589254 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
USP36-215ENST00000589254 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
USP36-215ENST00000589254 CUX2O14529 1486 aa23.41■■□□□ 1.34
USP36-215ENST00000589254 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
USP36-215ENST00000589254 NCAPD3P42695 1498 aa23.2■■□□□ 1.3
USP36-215ENST00000589254 NESP48681 1621 aa23.19■■□□□ 1.3
USP36-215ENST00000589254 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
USP36-215ENST00000589254 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
USP36-215ENST00000589254 SMARCA4P51532 1647 aa23■■□□□ 1.27
USP36-215ENST00000589254 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
USP36-215ENST00000589254 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
USP36-215ENST00000589254 KIF21AQ7Z4S6 1674 aa22.88■■□□□ 1.25
USP36-215ENST00000589254 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
USP36-215ENST00000589254 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
USP36-215ENST00000589254 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
USP36-215ENST00000589254 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
USP36-215ENST00000589254 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
USP36-215ENST00000589254 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
USP36-215ENST00000589254 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
USP36-215ENST00000589254 MRC2Q9UBG0 1479 aa22.52■■□□□ 1.2
USP36-215ENST00000589254 WDR62O43379 1518 aa22.51■■□□□ 1.19
USP36-215ENST00000589254 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
USP36-215ENST00000589254 WIZO95785 1651 aa22.4■■□□□ 1.18
USP36-215ENST00000589254 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
USP36-215ENST00000589254 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
USP36-215ENST00000589254 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
USP36-215ENST00000589254 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
USP36-215ENST00000589254 RIMBP3CA6NJZ7 1639 aa22.19■■□□□ 1.14
USP36-215ENST00000589254 RIMBP3BA6NNM3 1639 aa22.19■■□□□ 1.14
USP36-215ENST00000589254 RIMBP3Q9UFD9 1639 aa22.19■■□□□ 1.14
USP36-215ENST00000589254 CFTRP13569 1480 aa22.13■■□□□ 1.13
USP36-215ENST00000589254 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
USP36-215ENST00000589254 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
USP36-215ENST00000589254 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
USP36-215ENST00000589254 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
USP36-215ENST00000589254 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
USP36-215ENST00000589254 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
USP36-215ENST00000589254 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
USP36-215ENST00000589254 CHD1O14646 1710 aa21.84■■□□□ 1.09
USP36-215ENST00000589254 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
USP36-215ENST00000589254 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
USP36-215ENST00000589254 ARAP1Q96P48 1450 aa21.8■■□□□ 1.08
USP36-215ENST00000589254 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
USP36-215ENST00000589254 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
USP36-215ENST00000589254 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
USP36-215ENST00000589254 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
USP36-215ENST00000589254 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
USP36-215ENST00000589254 FBLN2P98095 1184 aa21.58■■□□□ 1.05
USP36-215ENST00000589254 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
USP36-215ENST00000589254 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
USP36-215ENST00000589254 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
USP36-215ENST00000589254 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
USP36-215ENST00000589254 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
USP36-215ENST00000589254 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
USP36-215ENST00000589254 SOGA1O94964 1423 aa21.39■■□□□ 1.02
USP36-215ENST00000589254 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
USP36-215ENST00000589254 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
USP36-215ENST00000589254 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
USP36-215ENST00000589254 CUX1P39880 1505 aa21.3■■□□□ 1
USP36-215ENST00000589254 WDR97A6NE52 1622 aa21.3■■□□□ 1
USP36-215ENST00000589254 MAGI1Q96QZ7 1491 aaPredicted RBP21.28■■□□□ 1
USP36-215ENST00000589254 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
USP36-215ENST00000589254 PBRM1Q86U86 1689 aa21.28■■□□□ 1
USP36-215ENST00000589254 ERCC6L2Q5T890 1561 aa21.27■□□□□ 0.99
USP36-215ENST00000589254 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
USP36-215ENST00000589254 SYNJ2O15056 1496 aa21.25■□□□□ 0.99
USP36-215ENST00000589254 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
USP36-215ENST00000589254 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
USP36-215ENST00000589254 KIF13AQ9H1H9 1805 aa21.08■□□□□ 0.96
USP36-215ENST00000589254 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
USP36-215ENST00000589254 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
USP36-215ENST00000589254 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
USP36-215ENST00000589254 ADAMTS12P58397 1594 aa21■□□□□ 0.95
USP36-215ENST00000589254 SHROOM2Q13796 1616 aa20.99■□□□□ 0.95
USP36-215ENST00000589254 NUP160Q12769 1436 aa20.96■□□□□ 0.95
USP36-215ENST00000589254 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
USP36-215ENST00000589254 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
USP36-215ENST00000589254 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
USP36-215ENST00000589254 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
USP36-215ENST00000589254 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
USP36-215ENST00000589254 DIP2BQ9P265 1576 aa20.76■□□□□ 0.91
USP36-215ENST00000589254 KDM4FA0A1W2PPD8 638 aa20.75■□□□□ 0.91
USP36-215ENST00000589254 ABCC10Q5T3U5 1492 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms