RNA–Protein interactions for RNA: ENST00000589197.1

RDH13-212, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 792 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-212ENST00000589197 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
RDH13-212ENST00000589197 CCDC180Q9P1Z9 1646 aa28.23■■■□□ 2.11
RDH13-212ENST00000589197 ABCC9O60706 1549 aa27.79■■■□□ 2.04
RDH13-212ENST00000589197 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
RDH13-212ENST00000589197 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
RDH13-212ENST00000589197 NACADO15069 1562 aa26.59■■□□□ 1.85
RDH13-212ENST00000589197 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
RDH13-212ENST00000589197 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
RDH13-212ENST00000589197 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
RDH13-212ENST00000589197 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
RDH13-212ENST00000589197 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.76
RDH13-212ENST00000589197 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
RDH13-212ENST00000589197 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
RDH13-212ENST00000589197 DNAJC5BQ9UF47 199 aa25.7■■□□□ 1.7
RDH13-212ENST00000589197 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
RDH13-212ENST00000589197 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
RDH13-212ENST00000589197 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
RDH13-212ENST00000589197 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
RDH13-212ENST00000589197 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
RDH13-212ENST00000589197 MROH2BQ7Z745 1585 aa24.65■■□□□ 1.54
RDH13-212ENST00000589197 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
RDH13-212ENST00000589197 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
RDH13-212ENST00000589197 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
RDH13-212ENST00000589197 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
RDH13-212ENST00000589197 PEG3Q9GZU2 1588 aa24.47■■□□□ 1.51
RDH13-212ENST00000589197 HMGXB3Q12766 1538 aa24.41■■□□□ 1.5
RDH13-212ENST00000589197 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
RDH13-212ENST00000589197 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
RDH13-212ENST00000589197 WIZO95785 1651 aa24.34■■□□□ 1.49
RDH13-212ENST00000589197 NESP48681 1621 aa24.1■■□□□ 1.45
RDH13-212ENST00000589197 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
RDH13-212ENST00000589197 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
RDH13-212ENST00000589197 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
RDH13-212ENST00000589197 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
RDH13-212ENST00000589197 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
RDH13-212ENST00000589197 CFTRP13569 1480 aa23.75■■□□□ 1.39
RDH13-212ENST00000589197 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
RDH13-212ENST00000589197 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
RDH13-212ENST00000589197 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
RDH13-212ENST00000589197 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
RDH13-212ENST00000589197 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
RDH13-212ENST00000589197 CUX2O14529 1486 aa23.6■■□□□ 1.37
RDH13-212ENST00000589197 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
RDH13-212ENST00000589197 MRC2Q9UBG0 1479 aa23.51■■□□□ 1.35
RDH13-212ENST00000589197 WDR62O43379 1518 aa23.43■■□□□ 1.34
RDH13-212ENST00000589197 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
RDH13-212ENST00000589197 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
RDH13-212ENST00000589197 TOPBP1Q92547 1522 aa23.24■■□□□ 1.31
RDH13-212ENST00000589197 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
RDH13-212ENST00000589197 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
RDH13-212ENST00000589197 CUX1P39880 1505 aa23.1■■□□□ 1.29
RDH13-212ENST00000589197 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
RDH13-212ENST00000589197 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
RDH13-212ENST00000589197 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
RDH13-212ENST00000589197 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
RDH13-212ENST00000589197 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
RDH13-212ENST00000589197 TARBP1Q13395 1621 aaKnown RBP22.99■■□□□ 1.27
RDH13-212ENST00000589197 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
RDH13-212ENST00000589197 SOGA1O94964 1423 aa22.96■■□□□ 1.27
RDH13-212ENST00000589197 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
RDH13-212ENST00000589197 WRNQ14191 1432 aaPredicted RBP eCLIP22.9■■□□□ 1.26
RDH13-212ENST00000589197 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
RDH13-212ENST00000589197 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
RDH13-212ENST00000589197 EIF4G3O43432 1585 aaKnown RBP22.84■■□□□ 1.25
RDH13-212ENST00000589197 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
RDH13-212ENST00000589197 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
RDH13-212ENST00000589197 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
RDH13-212ENST00000589197 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
RDH13-212ENST00000589197 OSCARQ8IYS5 282 aa22.7■■□□□ 1.22
RDH13-212ENST00000589197 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
RDH13-212ENST00000589197 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
RDH13-212ENST00000589197 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
RDH13-212ENST00000589197 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
RDH13-212ENST00000589197 FBLN2P98095 1184 aa22.6■■□□□ 1.21
RDH13-212ENST00000589197 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
RDH13-212ENST00000589197 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
RDH13-212ENST00000589197 CHD1O14646 1710 aa22.55■■□□□ 1.2
RDH13-212ENST00000589197 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
RDH13-212ENST00000589197 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
RDH13-212ENST00000589197 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
RDH13-212ENST00000589197 IGF1RP08069 1367 aa22.43■■□□□ 1.18
RDH13-212ENST00000589197 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
RDH13-212ENST00000589197 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
RDH13-212ENST00000589197 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
RDH13-212ENST00000589197 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
RDH13-212ENST00000589197 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
RDH13-212ENST00000589197 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
RDH13-212ENST00000589197 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
RDH13-212ENST00000589197 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
RDH13-212ENST00000589197 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
RDH13-212ENST00000589197 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
RDH13-212ENST00000589197 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
RDH13-212ENST00000589197 NUP160Q12769 1436 aa22.29■■□□□ 1.16
RDH13-212ENST00000589197 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
RDH13-212ENST00000589197 CARMIL1Q5VZK9 1371 aa22.23■■□□□ 1.15
RDH13-212ENST00000589197 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
RDH13-212ENST00000589197 CUL7Q14999 1698 aa22.17■■□□□ 1.14
RDH13-212ENST00000589197 CYB5RLQ6IPT4 315 aa22.17■■□□□ 1.14
RDH13-212ENST00000589197 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
RDH13-212ENST00000589197 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms