RNA–Protein interactions for RNA: ENST00000589090.1

PPL-203, Transcript of periplakin, humanhuman

TSL 3

Gene PPL, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPL-203ENST00000589090 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
PPL-203ENST00000589090 CCDC180Q9P1Z9 1646 aa35.02■■■■□ 3.2
PPL-203ENST00000589090 ABCC9O60706 1549 aa34.55■■■■□ 3.12
PPL-203ENST00000589090 RB1CC1Q8TDY2 1594 aa33.11■■■□□ 2.89
PPL-203ENST00000589090 NACADO15069 1562 aa33.04■■■□□ 2.88
PPL-203ENST00000589090 DCAF8L2P0C7V8 631 aa32.98■■■□□ 2.87
PPL-203ENST00000589090 MYO15BQ96JP2 1530 aa32.79■■■□□ 2.84
PPL-203ENST00000589090 ZCCHC6Q5VYS8 1495 aaKnown RBP32.7■■■□□ 2.83
PPL-203ENST00000589090 DCAF1Q9Y4B6 1507 aa32.55■■■□□ 2.8
PPL-203ENST00000589090 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
PPL-203ENST00000589090 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
PPL-203ENST00000589090 BICRAQ9NZM4 1560 aa32.15■■■□□ 2.74
PPL-203ENST00000589090 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
PPL-203ENST00000589090 SCRIBQ14160 1630 aa31.92■■■□□ 2.7
PPL-203ENST00000589090 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
PPL-203ENST00000589090 EIF4G1Q04637 1599 aaKnown RBP31.3■■■□□ 2.6
PPL-203ENST00000589090 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
PPL-203ENST00000589090 CECR2Q9BXF3 1484 aa31.09■■■□□ 2.57
PPL-203ENST00000589090 NCAPD3P42695 1498 aa30.54■■■□□ 2.48
PPL-203ENST00000589090 SMARCA4P51532 1647 aa30.54■■■□□ 2.48
PPL-203ENST00000589090 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
PPL-203ENST00000589090 BAZ1AQ9NRL2 1556 aaPredicted RBP30.48■■■□□ 2.47
PPL-203ENST00000589090 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
PPL-203ENST00000589090 MROH2BQ7Z745 1585 aa30.3■■■□□ 2.44
PPL-203ENST00000589090 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
PPL-203ENST00000589090 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
PPL-203ENST00000589090 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
PPL-203ENST00000589090 WIZO95785 1651 aa29.92■■■□□ 2.38
PPL-203ENST00000589090 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
PPL-203ENST00000589090 NESP48681 1621 aa29.83■■■□□ 2.37
PPL-203ENST00000589090 ERCC6Q03468 1493 aa29.79■■■□□ 2.36
PPL-203ENST00000589090 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
PPL-203ENST00000589090 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.33
PPL-203ENST00000589090 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
PPL-203ENST00000589090 CUX2O14529 1486 aa29.6■■■□□ 2.33
PPL-203ENST00000589090 PDS5BQ9NTI5 1447 aa29.56■■■□□ 2.32
PPL-203ENST00000589090 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
PPL-203ENST00000589090 THOC2Q8NI27 1593 aaKnown RBP29.4■■■□□ 2.3
PPL-203ENST00000589090 CFTRP13569 1480 aa29.39■■■□□ 2.3
PPL-203ENST00000589090 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
PPL-203ENST00000589090 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
PPL-203ENST00000589090 MRC2Q9UBG0 1479 aa29.24■■■□□ 2.27
PPL-203ENST00000589090 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
PPL-203ENST00000589090 WDR62O43379 1518 aa29.15■■■□□ 2.26
PPL-203ENST00000589090 DNAJC5Q9H3Z4 198 aa29.07■■■□□ 2.24
PPL-203ENST00000589090 PRDM2Q13029 1718 aa29■■■□□ 2.23
PPL-203ENST00000589090 URB2Q14146 1524 aaKnown RBP28.98■■■□□ 2.23
PPL-203ENST00000589090 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
PPL-203ENST00000589090 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
PPL-203ENST00000589090 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
PPL-203ENST00000589090 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
PPL-203ENST00000589090 IFT140Q96RY7 1462 aa28.64■■■□□ 2.17
PPL-203ENST00000589090 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
PPL-203ENST00000589090 POLA1P09884 1462 aaPredicted RBP28.5■■■□□ 2.15
PPL-203ENST00000589090 TARBP1Q13395 1621 aaKnown RBP28.44■■■□□ 2.14
PPL-203ENST00000589090 CUX1P39880 1505 aa28.43■■■□□ 2.14
PPL-203ENST00000589090 SOGA1O94964 1423 aa28.4■■■□□ 2.14
PPL-203ENST00000589090 OSCARQ8IYS5 282 aa28.38■■■□□ 2.13
PPL-203ENST00000589090 RAD54L2Q9Y4B4 1467 aa28.38■■■□□ 2.13
PPL-203ENST00000589090 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
PPL-203ENST00000589090 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.13
PPL-203ENST00000589090 EIF4G3O43432 1585 aaKnown RBP28.35■■■□□ 2.13
PPL-203ENST00000589090 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
PPL-203ENST00000589090 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
PPL-203ENST00000589090 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
PPL-203ENST00000589090 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
PPL-203ENST00000589090 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
PPL-203ENST00000589090 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
PPL-203ENST00000589090 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
PPL-203ENST00000589090 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
PPL-203ENST00000589090 FBLN2P98095 1184 aa28.06■■■□□ 2.08
PPL-203ENST00000589090 GAPVD1Q14C86 1478 aa28.05■■■□□ 2.08
PPL-203ENST00000589090 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
PPL-203ENST00000589090 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
PPL-203ENST00000589090 CHD1O14646 1710 aa28.01■■■□□ 2.07
PPL-203ENST00000589090 ABCA5Q8WWZ7 1642 aa27.98■■■□□ 2.07
PPL-203ENST00000589090 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
PPL-203ENST00000589090 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
PPL-203ENST00000589090 SYNJ2O15056 1496 aa27.92■■■□□ 2.06
PPL-203ENST00000589090 PBRM1Q86U86 1689 aa27.91■■■□□ 2.06
PPL-203ENST00000589090 RIMBP3CA6NJZ7 1639 aa27.86■■■□□ 2.05
PPL-203ENST00000589090 RIMBP3BA6NNM3 1639 aa27.86■■■□□ 2.05
PPL-203ENST00000589090 RIMBP3Q9UFD9 1639 aa27.86■■■□□ 2.05
PPL-203ENST00000589090 ARHGEF11O15085 1522 aa27.86■■■□□ 2.05
PPL-203ENST00000589090 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
PPL-203ENST00000589090 ERICH3Q5RHP9 1530 aa27.76■■■□□ 2.03
PPL-203ENST00000589090 FHAD1B1AJZ9 1412 aa27.72■■■□□ 2.03
PPL-203ENST00000589090 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
PPL-203ENST00000589090 GRIN2AQ12879 1464 aa27.7■■■□□ 2.03
PPL-203ENST00000589090 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
PPL-203ENST00000589090 ARAP1Q96P48 1450 aa27.63■■■□□ 2.01
PPL-203ENST00000589090 NUP160Q12769 1436 aa27.62■■■□□ 2.01
PPL-203ENST00000589090 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
PPL-203ENST00000589090 IGF1RP08069 1367 aa27.59■■■□□ 2.01
PPL-203ENST00000589090 CEP170Q5SW79 1584 aa27.56■■■□□ 2
PPL-203ENST00000589090 CUL7Q14999 1698 aa27.4■■□□□ 1.98
PPL-203ENST00000589090 SHROOM2Q13796 1616 aa27.39■■□□□ 1.98
PPL-203ENST00000589090 CARMIL1Q5VZK9 1371 aa27.38■■□□□ 1.97
PPL-203ENST00000589090 JPH4Q96JJ6 628 aa27.38■■□□□ 1.97
PPL-203ENST00000589090 ERCC6L2Q5T890 1561 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms