RNA–Protein interactions for RNA: ENST00000589081.1

APOC1P1-205, Transcript of apolipoprotein C1 pseudogene 1, humanhuman

TSL 3

Gene APOC1P1, Length 279 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P1-205ENST00000589081 NISCHQ9Y2I1 1504 aa22.04■■□□□ 1.12
APOC1P1-205ENST00000589081 ABCC9O60706 1549 aa20.13■□□□□ 0.81
APOC1P1-205ENST00000589081 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
APOC1P1-205ENST00000589081 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
APOC1P1-205ENST00000589081 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
APOC1P1-205ENST00000589081 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
APOC1P1-205ENST00000589081 NACADO15069 1562 aa18.78■□□□□ 0.6
APOC1P1-205ENST00000589081 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
APOC1P1-205ENST00000589081 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
APOC1P1-205ENST00000589081 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
APOC1P1-205ENST00000589081 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
APOC1P1-205ENST00000589081 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
APOC1P1-205ENST00000589081 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.51
APOC1P1-205ENST00000589081 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
APOC1P1-205ENST00000589081 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
APOC1P1-205ENST00000589081 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
APOC1P1-205ENST00000589081 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
APOC1P1-205ENST00000589081 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
APOC1P1-205ENST00000589081 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
APOC1P1-205ENST00000589081 CUX2O14529 1486 aa17.36■□□□□ 0.37
APOC1P1-205ENST00000589081 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
APOC1P1-205ENST00000589081 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
APOC1P1-205ENST00000589081 NESP48681 1621 aa17.3■□□□□ 0.36
APOC1P1-205ENST00000589081 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
APOC1P1-205ENST00000589081 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
APOC1P1-205ENST00000589081 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
APOC1P1-205ENST00000589081 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
APOC1P1-205ENST00000589081 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
APOC1P1-205ENST00000589081 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
APOC1P1-205ENST00000589081 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
APOC1P1-205ENST00000589081 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
APOC1P1-205ENST00000589081 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
APOC1P1-205ENST00000589081 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
APOC1P1-205ENST00000589081 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
APOC1P1-205ENST00000589081 WIZO95785 1651 aa16.85■□□□□ 0.29
APOC1P1-205ENST00000589081 WDR62O43379 1518 aa16.83■□□□□ 0.28
APOC1P1-205ENST00000589081 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
APOC1P1-205ENST00000589081 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
APOC1P1-205ENST00000589081 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
APOC1P1-205ENST00000589081 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
APOC1P1-205ENST00000589081 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
APOC1P1-205ENST00000589081 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
APOC1P1-205ENST00000589081 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
APOC1P1-205ENST00000589081 CFTRP13569 1480 aa16.6■□□□□ 0.25
APOC1P1-205ENST00000589081 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
APOC1P1-205ENST00000589081 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
APOC1P1-205ENST00000589081 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
APOC1P1-205ENST00000589081 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
APOC1P1-205ENST00000589081 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
APOC1P1-205ENST00000589081 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
APOC1P1-205ENST00000589081 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
APOC1P1-205ENST00000589081 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
APOC1P1-205ENST00000589081 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
APOC1P1-205ENST00000589081 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
APOC1P1-205ENST00000589081 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
APOC1P1-205ENST00000589081 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
APOC1P1-205ENST00000589081 CHD1O14646 1710 aa16.31■□□□□ 0.2
APOC1P1-205ENST00000589081 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
APOC1P1-205ENST00000589081 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
APOC1P1-205ENST00000589081 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
APOC1P1-205ENST00000589081 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
APOC1P1-205ENST00000589081 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
APOC1P1-205ENST00000589081 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
APOC1P1-205ENST00000589081 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
APOC1P1-205ENST00000589081 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
APOC1P1-205ENST00000589081 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
APOC1P1-205ENST00000589081 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
APOC1P1-205ENST00000589081 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
APOC1P1-205ENST00000589081 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
APOC1P1-205ENST00000589081 CUX1P39880 1505 aa16.03■□□□□ 0.16
APOC1P1-205ENST00000589081 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
APOC1P1-205ENST00000589081 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
APOC1P1-205ENST00000589081 SOGA1O94964 1423 aa15.97■□□□□ 0.15
APOC1P1-205ENST00000589081 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
APOC1P1-205ENST00000589081 FBLN2P98095 1184 aa15.95■□□□□ 0.14
APOC1P1-205ENST00000589081 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
APOC1P1-205ENST00000589081 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
APOC1P1-205ENST00000589081 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
APOC1P1-205ENST00000589081 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
APOC1P1-205ENST00000589081 TRHP20396 242 aaPredicted RBP15.89■□□□□ 0.13
APOC1P1-205ENST00000589081 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
APOC1P1-205ENST00000589081 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
APOC1P1-205ENST00000589081 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
APOC1P1-205ENST00000589081 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
APOC1P1-205ENST00000589081 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
APOC1P1-205ENST00000589081 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
APOC1P1-205ENST00000589081 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
APOC1P1-205ENST00000589081 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
APOC1P1-205ENST00000589081 GRIN2AQ12879 1464 aa15.73■□□□□ 0.11
APOC1P1-205ENST00000589081 KIF13AQ9H1H9 1805 aa15.72■□□□□ 0.11
APOC1P1-205ENST00000589081 NUP160Q12769 1436 aa15.71■□□□□ 0.11
APOC1P1-205ENST00000589081 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
APOC1P1-205ENST00000589081 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
APOC1P1-205ENST00000589081 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
APOC1P1-205ENST00000589081 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
APOC1P1-205ENST00000589081 WRNQ14191 1432 aaPredicted RBP eCLIP15.57■□□□□ 0.08
APOC1P1-205ENST00000589081 ERICH3Q5RHP9 1530 aa15.56■□□□□ 0.08
APOC1P1-205ENST00000589081 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
APOC1P1-205ENST00000589081 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
APOC1P1-205ENST00000589081 ADCY10Q96PN6 1610 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms