RNA–Protein interactions for RNA: ENST00000589071.3

LINC00905-204, long intergenic non-protein coding RNA 905, humanhuman

TSL 2

Gene LINC00905, Length 843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00905-204ENST00000589071 NISCHQ9Y2I1 1504 aa38.05■■■■□ 3.68
LINC00905-204ENST00000589071 CCDC180Q9P1Z9 1646 aa33.84■■■■□ 3.01
LINC00905-204ENST00000589071 ABCC9O60706 1549 aa33.18■■■□□ 2.9
LINC00905-204ENST00000589071 RB1CC1Q8TDY2 1594 aa31.89■■■□□ 2.7
LINC00905-204ENST00000589071 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
LINC00905-204ENST00000589071 NACADO15069 1562 aa31.83■■■□□ 2.69
LINC00905-204ENST00000589071 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.66
LINC00905-204ENST00000589071 MYO15BQ96JP2 1530 aa31.6■■■□□ 2.65
LINC00905-204ENST00000589071 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
LINC00905-204ENST00000589071 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
LINC00905-204ENST00000589071 PABPN1Q86U42 306 aaKnown RBP eCLIP31■■■□□ 2.55
LINC00905-204ENST00000589071 SCRIBQ14160 1630 aa30.91■■■□□ 2.54
LINC00905-204ENST00000589071 BICRAQ9NZM4 1560 aa30.88■■■□□ 2.53
LINC00905-204ENST00000589071 SHROOM4Q9ULL8 1493 aa30.59■■■□□ 2.49
LINC00905-204ENST00000589071 DNAJC5BQ9UF47 199 aa30.42■■■□□ 2.46
LINC00905-204ENST00000589071 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
LINC00905-204ENST00000589071 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
LINC00905-204ENST00000589071 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
LINC00905-204ENST00000589071 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
LINC00905-204ENST00000589071 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
LINC00905-204ENST00000589071 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
LINC00905-204ENST00000589071 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
LINC00905-204ENST00000589071 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
LINC00905-204ENST00000589071 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
LINC00905-204ENST00000589071 HMGXB3Q12766 1538 aa29.23■■■□□ 2.27
LINC00905-204ENST00000589071 PEG3Q9GZU2 1588 aa29.22■■■□□ 2.27
LINC00905-204ENST00000589071 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
LINC00905-204ENST00000589071 WIZO95785 1651 aa29■■■□□ 2.23
LINC00905-204ENST00000589071 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
LINC00905-204ENST00000589071 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
LINC00905-204ENST00000589071 NESP48681 1621 aa28.69■■■□□ 2.18
LINC00905-204ENST00000589071 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
LINC00905-204ENST00000589071 LAMC3Q9Y6N6 1575 aa28.61■■■□□ 2.17
LINC00905-204ENST00000589071 CADPSQ9ULU8 1353 aa28.52■■■□□ 2.16
LINC00905-204ENST00000589071 PDS5BQ9NTI5 1447 aa28.44■■■□□ 2.14
LINC00905-204ENST00000589071 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
LINC00905-204ENST00000589071 CFTRP13569 1480 aa28.34■■■□□ 2.13
LINC00905-204ENST00000589071 KIF21AQ7Z4S6 1674 aa28.33■■■□□ 2.13
LINC00905-204ENST00000589071 CUX2O14529 1486 aa28.3■■■□□ 2.12
LINC00905-204ENST00000589071 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
LINC00905-204ENST00000589071 THOC2Q8NI27 1593 aaKnown RBP28.25■■■□□ 2.11
LINC00905-204ENST00000589071 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
LINC00905-204ENST00000589071 CEP164Q9UPV0 1460 aa28.2■■■□□ 2.1
LINC00905-204ENST00000589071 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
LINC00905-204ENST00000589071 PRDM2Q13029 1718 aa28.1■■■□□ 2.09
LINC00905-204ENST00000589071 WDR62O43379 1518 aa28.04■■■□□ 2.08
LINC00905-204ENST00000589071 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
LINC00905-204ENST00000589071 TOPBP1Q92547 1522 aa27.75■■■□□ 2.03
LINC00905-204ENST00000589071 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
LINC00905-204ENST00000589071 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
LINC00905-204ENST00000589071 IFT140Q96RY7 1462 aa27.59■■■□□ 2.01
LINC00905-204ENST00000589071 CUX1P39880 1505 aa27.52■■■□□ 2
LINC00905-204ENST00000589071 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
LINC00905-204ENST00000589071 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
LINC00905-204ENST00000589071 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
LINC00905-204ENST00000589071 DNAJC5Q9H3Z4 198 aa27.44■■□□□ 1.98
LINC00905-204ENST00000589071 TARBP1Q13395 1621 aaKnown RBP27.42■■□□□ 1.98
LINC00905-204ENST00000589071 SOGA1O94964 1423 aa27.41■■□□□ 1.98
LINC00905-204ENST00000589071 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
LINC00905-204ENST00000589071 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
LINC00905-204ENST00000589071 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
LINC00905-204ENST00000589071 AQRO60306 1485 aaKnown RBP eCLIP27.31■■□□□ 1.96
LINC00905-204ENST00000589071 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
LINC00905-204ENST00000589071 SYNJ1O43426 1573 aa27.26■■□□□ 1.96
LINC00905-204ENST00000589071 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
LINC00905-204ENST00000589071 BIVM-ERCC5R4GMW8 1640 aa27.26■■□□□ 1.95
LINC00905-204ENST00000589071 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
LINC00905-204ENST00000589071 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
LINC00905-204ENST00000589071 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
LINC00905-204ENST00000589071 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
LINC00905-204ENST00000589071 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
LINC00905-204ENST00000589071 SNAPC4Q5SXM2 1469 aa27.07■■□□□ 1.92
LINC00905-204ENST00000589071 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
LINC00905-204ENST00000589071 FBLN2P98095 1184 aa27.04■■□□□ 1.92
LINC00905-204ENST00000589071 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
LINC00905-204ENST00000589071 PBRM1Q86U86 1689 aa27.01■■□□□ 1.92
LINC00905-204ENST00000589071 CHD1O14646 1710 aa27■■□□□ 1.91
LINC00905-204ENST00000589071 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
LINC00905-204ENST00000589071 SYNJ2O15056 1496 aa26.92■■□□□ 1.9
LINC00905-204ENST00000589071 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
LINC00905-204ENST00000589071 ADAMTS12P58397 1594 aa26.82■■□□□ 1.88
LINC00905-204ENST00000589071 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
LINC00905-204ENST00000589071 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
LINC00905-204ENST00000589071 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
LINC00905-204ENST00000589071 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
LINC00905-204ENST00000589071 CLASP1Q7Z460 1538 aa26.7■■□□□ 1.87
LINC00905-204ENST00000589071 ARHGEF11O15085 1522 aa26.69■■□□□ 1.86
LINC00905-204ENST00000589071 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
LINC00905-204ENST00000589071 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
LINC00905-204ENST00000589071 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
LINC00905-204ENST00000589071 IGF1RP08069 1367 aa26.65■■□□□ 1.86
LINC00905-204ENST00000589071 NUP160Q12769 1436 aa26.61■■□□□ 1.85
LINC00905-204ENST00000589071 CUL7Q14999 1698 aa26.6■■□□□ 1.85
LINC00905-204ENST00000589071 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
LINC00905-204ENST00000589071 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
LINC00905-204ENST00000589071 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
LINC00905-204ENST00000589071 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
LINC00905-204ENST00000589071 CYB5RLQ6IPT4 315 aa26.46■■□□□ 1.83
LINC00905-204ENST00000589071 SHROOM2Q13796 1616 aa26.39■■□□□ 1.82
LINC00905-204ENST00000589071 RAPGEF2Q9Y4G8 1499 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms