RNA–Protein interactions for RNA: ENST00000589053.1

INO80C-208, Transcript of INO80 complex subunit C, humanhuman

Gene INO80C, Length 434 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80C-208ENST00000589053 NISCHQ9Y2I1 1504 aa54.67■■■■■ 6.34
INO80C-208ENST00000589053 CCDC180Q9P1Z9 1646 aa48.72■■■■■ 5.39
INO80C-208ENST00000589053 ABCC9O60706 1549 aa48.43■■■■■ 5.34
INO80C-208ENST00000589053 RB1CC1Q8TDY2 1594 aa46.21■■■■■ 4.99
INO80C-208ENST00000589053 DCAF8L2P0C7V8 631 aa46.04■■■■■ 4.96
INO80C-208ENST00000589053 NACADO15069 1562 aa46.01■■■■■ 4.96
INO80C-208ENST00000589053 MYO15BQ96JP2 1530 aa45.54■■■■■ 4.88
INO80C-208ENST00000589053 ZCCHC6Q5VYS8 1495 aaKnown RBP45.4■■■■■ 4.86
INO80C-208ENST00000589053 PABPN1Q86U42 306 aaKnown RBP eCLIP45.25■■■■■ 4.83
INO80C-208ENST00000589053 UNC13AQ9UPW8 1703 aa45.15■■■■■ 4.82
INO80C-208ENST00000589053 DNAJC5BQ9UF47 199 aa45.15■■■■■ 4.82
INO80C-208ENST00000589053 DCAF1Q9Y4B6 1507 aa45.14■■■■■ 4.82
INO80C-208ENST00000589053 BICRAQ9NZM4 1560 aa44.92■■■■■ 4.78
INO80C-208ENST00000589053 SCRIBQ14160 1630 aa44.53■■■■■ 4.72
INO80C-208ENST00000589053 SHROOM4Q9ULL8 1493 aa44.25■■■■■ 4.67
INO80C-208ENST00000589053 EIF4G1Q04637 1599 aaKnown RBP43.75■■■■■ 4.59
INO80C-208ENST00000589053 CC2D2AQ9P2K1 1620 aa43.73■■■■■ 4.59
INO80C-208ENST00000589053 CECR2Q9BXF3 1484 aa43.56■■■■■ 4.56
INO80C-208ENST00000589053 NCAPD3P42695 1498 aa42.55■■■■■ 4.4
INO80C-208ENST00000589053 SMARCA4P51532 1647 aa42.51■■■■■ 4.4
INO80C-208ENST00000589053 ATAD2BQ9ULI0 1458 aa42.49■■■■■ 4.39
INO80C-208ENST00000589053 BAZ1AQ9NRL2 1556 aaPredicted RBP42.35■■■■■ 4.37
INO80C-208ENST00000589053 SMARCA2P51531 1590 aa42.31■■■■■ 4.36
INO80C-208ENST00000589053 HMGXB3Q12766 1538 aa42.2■■■■■ 4.35
INO80C-208ENST00000589053 MROH2BQ7Z745 1585 aa42.17■■■■■ 4.34
INO80C-208ENST00000589053 PEG3Q9GZU2 1588 aa42.09■■■■■ 4.33
INO80C-208ENST00000589053 BAZ1BQ9UIG0 1483 aaKnown RBP42.06■■■■■ 4.32
INO80C-208ENST00000589053 NESP48681 1621 aa41.77■■■■■ 4.28
INO80C-208ENST00000589053 ERCC6Q03468 1493 aa41.72■■■■■ 4.27
INO80C-208ENST00000589053 WIZO95785 1651 aa41.65■■■■■ 4.26
INO80C-208ENST00000589053 RSF1Q96T23 1441 aaPredicted RBP41.48■■■■■ 4.23
INO80C-208ENST00000589053 CUX2O14529 1486 aa41.47■■■■■ 4.23
INO80C-208ENST00000589053 LAMC3Q9Y6N6 1575 aa41.44■■■■■ 4.22
INO80C-208ENST00000589053 CADPSQ9ULU8 1353 aa41.29■■■■■ 4.2
INO80C-208ENST00000589053 PDS5BQ9NTI5 1447 aa41.23■■■■■ 4.19
INO80C-208ENST00000589053 THOC2Q8NI27 1593 aaKnown RBP41.16■■■■■ 4.18
INO80C-208ENST00000589053 KIF21AQ7Z4S6 1674 aa41.13■■■■■ 4.18
INO80C-208ENST00000589053 TOP2AP11388 1531 aaKnown RBP41.12■■■■■ 4.17
INO80C-208ENST00000589053 DNAJC5Q9H3Z4 198 aa41.03■■■■■ 4.16
INO80C-208ENST00000589053 CFTRP13569 1480 aa40.9■■■■■ 4.14
INO80C-208ENST00000589053 MRC2Q9UBG0 1479 aa40.83■■■■■ 4.13
INO80C-208ENST00000589053 FANCD2Q9BXW9 1451 aa40.79■■■■■ 4.12
INO80C-208ENST00000589053 CEP164Q9UPV0 1460 aa40.76■■■■■ 4.12
INO80C-208ENST00000589053 CCDC88BA6NC98 1476 aa40.73■■■■■ 4.11
INO80C-208ENST00000589053 WDR62O43379 1518 aa40.72■■■■■ 4.11
INO80C-208ENST00000589053 URB2Q14146 1524 aaKnown RBP40.46■■■■■ 4.07
INO80C-208ENST00000589053 PRDM2Q13029 1718 aa40.36■■■■■ 4.05
INO80C-208ENST00000589053 TOPBP1Q92547 1522 aa40.07■■■■■ 4.01
INO80C-208ENST00000589053 SUPT5HO00267 1087 aaKnown RBP40.04■■■■■ 4
INO80C-208ENST00000589053 ABCC8Q09428 1581 aa39.96■■■■□ 3.99
INO80C-208ENST00000589053 IFT140Q96RY7 1462 aa39.94■■■■□ 3.98
INO80C-208ENST00000589053 DNMBPQ6XZF7 1577 aa39.93■■■■□ 3.98
INO80C-208ENST00000589053 ZNF608Q9ULD9 1512 aaPredicted RBP39.91■■■■□ 3.98
INO80C-208ENST00000589053 OSCARQ8IYS5 282 aa39.75■■■■□ 3.95
INO80C-208ENST00000589053 POLA1P09884 1462 aaPredicted RBP39.7■■■■□ 3.95
INO80C-208ENST00000589053 TARBP1Q13395 1621 aaKnown RBP39.67■■■■□ 3.94
INO80C-208ENST00000589053 EIF4G3O43432 1585 aaKnown RBP39.61■■■■□ 3.93
INO80C-208ENST00000589053 AQRO60306 1485 aaKnown RBP eCLIP39.61■■■■□ 3.931e-6■■■■■ 33.8
INO80C-208ENST00000589053 RAD54L2Q9Y4B4 1467 aa39.6■■■■□ 3.93
INO80C-208ENST00000589053 CUX1P39880 1505 aa39.57■■■■□ 3.93
INO80C-208ENST00000589053 SOGA1O94964 1423 aa39.56■■■■□ 3.92
INO80C-208ENST00000589053 FGD5Q6ZNL6 1462 aa39.52■■■■□ 3.92
INO80C-208ENST00000589053 TDRD9Q8NDG6 1382 aaKnown RBP39.45■■■■□ 3.91
INO80C-208ENST00000589053 TRIM41Q8WV44 630 aa39.43■■■■□ 3.9
INO80C-208ENST00000589053 FBLN2P98095 1184 aa39.25■■■■□ 3.87
INO80C-208ENST00000589053 CHD1O14646 1710 aa39.2■■■■□ 3.87
INO80C-208ENST00000589053 WDR97A6NE52 1622 aa39.2■■■■□ 3.87
INO80C-208ENST00000589053 SNAPC4Q5SXM2 1469 aa39.17■■■■□ 3.86
INO80C-208ENST00000589053 GRIN2BQ13224 1484 aa39.11■■■■□ 3.85
INO80C-208ENST00000589053 RIMBP3CA6NJZ7 1639 aa39.11■■■■□ 3.85
INO80C-208ENST00000589053 RIMBP3BA6NNM3 1639 aa39.11■■■■□ 3.85
INO80C-208ENST00000589053 RIMBP3Q9UFD9 1639 aa39.11■■■■□ 3.85
INO80C-208ENST00000589053 ABCA10Q8WWZ4 1543 aa39.09■■■■□ 3.85
INO80C-208ENST00000589053 WRNQ14191 1432 aaPredicted RBP eCLIP39.08■■■■□ 3.85
INO80C-208ENST00000589053 ARHGEF11O15085 1522 aa39.06■■■■□ 3.84
INO80C-208ENST00000589053 GAPVD1Q14C86 1478 aa39.05■■■■□ 3.84
INO80C-208ENST00000589053 MAGI1Q96QZ7 1491 aaPredicted RBP39.05■■■■□ 3.84
INO80C-208ENST00000589053 CHMP7Q8WUX9 453 aaPredicted RBP39.02■■■■□ 3.84
INO80C-208ENST00000589053 SYNJ1O43426 1573 aa39.02■■■■□ 3.84
INO80C-208ENST00000589053 TOP2BQ02880 1626 aa39.01■■■■□ 3.84
INO80C-208ENST00000589053 BIVM-ERCC5R4GMW8 1640 aa38.99■■■■□ 3.83
INO80C-208ENST00000589053 ABCA5Q8WWZ7 1642 aa38.95■■■■□ 3.83
INO80C-208ENST00000589053 SYNJ2O15056 1496 aa38.92■■■■□ 3.82
INO80C-208ENST00000589053 PBRM1Q86U86 1689 aa38.91■■■■□ 3.82
INO80C-208ENST00000589053 CYB5RLQ6IPT4 315 aa38.82■■■■□ 3.8
INO80C-208ENST00000589053 CLASP1Q7Z460 1538 aa38.82■■■■□ 3.8
INO80C-208ENST00000589053 ARAP1Q96P48 1450 aa38.73■■■■□ 3.79
INO80C-208ENST00000589053 ADAMTS12P58397 1594 aa38.62■■■■□ 3.77
INO80C-208ENST00000589053 GRIN2AQ12879 1464 aa38.61■■■■□ 3.77
INO80C-208ENST00000589053 ERICH3Q5RHP9 1530 aa38.58■■■■□ 3.77
INO80C-208ENST00000589053 FHAD1B1AJZ9 1412 aa38.57■■■■□ 3.77
INO80C-208ENST00000589053 NUP160Q12769 1436 aa38.48■■■■□ 3.75
INO80C-208ENST00000589053 CEP170Q5SW79 1584 aa38.46■■■■□ 3.75
INO80C-208ENST00000589053 ERCC6L2Q5T890 1561 aa38.31■■■■□ 3.72
INO80C-208ENST00000589053 IGF1RP08069 1367 aa38.31■■■■□ 3.72
INO80C-208ENST00000589053 KIF27Q86VH2 1401 aa38.29■■■■□ 3.72
INO80C-208ENST00000589053 SHROOM2Q13796 1616 aa38.21■■■■□ 3.71
INO80C-208ENST00000589053 TRHP20396 242 aaPredicted RBP38.2■■■■□ 3.71
INO80C-208ENST00000589053 JPH4Q96JJ6 628 aa38.15■■■■□ 3.7
INO80C-208ENST00000589053 PRG4Q92954 1404 aaPredicted RBP38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms