RNA–Protein interactions for RNA: ENST00000589020.1

SSC5D-204, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 5

Gene SSC5D, Length 354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-204ENST00000589020 NISCHQ9Y2I1 1504 aa30.86■■■□□ 2.53
SSC5D-204ENST00000589020 ABCC9O60706 1549 aa28.4■■■□□ 2.14
SSC5D-204ENST00000589020 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
SSC5D-204ENST00000589020 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
SSC5D-204ENST00000589020 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
SSC5D-204ENST00000589020 NACADO15069 1562 aa26.53■■□□□ 1.84
SSC5D-204ENST00000589020 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
SSC5D-204ENST00000589020 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
SSC5D-204ENST00000589020 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
SSC5D-204ENST00000589020 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
SSC5D-204ENST00000589020 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
SSC5D-204ENST00000589020 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.71
SSC5D-204ENST00000589020 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
SSC5D-204ENST00000589020 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.69
SSC5D-204ENST00000589020 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
SSC5D-204ENST00000589020 ZCCHC6Q5VYS8 1495 aaKnown RBP25.5■■□□□ 1.67
SSC5D-204ENST00000589020 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
SSC5D-204ENST00000589020 SCRIBQ14160 1630 aa25.45■■□□□ 1.67
SSC5D-204ENST00000589020 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
SSC5D-204ENST00000589020 CUX2O14529 1486 aa24.7■■□□□ 1.55
SSC5D-204ENST00000589020 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
SSC5D-204ENST00000589020 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
SSC5D-204ENST00000589020 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
SSC5D-204ENST00000589020 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
SSC5D-204ENST00000589020 NESP48681 1621 aa24.28■■□□□ 1.48
SSC5D-204ENST00000589020 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
SSC5D-204ENST00000589020 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
SSC5D-204ENST00000589020 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
SSC5D-204ENST00000589020 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
SSC5D-204ENST00000589020 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
SSC5D-204ENST00000589020 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
SSC5D-204ENST00000589020 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
SSC5D-204ENST00000589020 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
SSC5D-204ENST00000589020 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
SSC5D-204ENST00000589020 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
SSC5D-204ENST00000589020 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
SSC5D-204ENST00000589020 WDR62O43379 1518 aa23.73■■□□□ 1.39
SSC5D-204ENST00000589020 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
SSC5D-204ENST00000589020 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
SSC5D-204ENST00000589020 WIZO95785 1651 aa23.52■■□□□ 1.36
SSC5D-204ENST00000589020 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
SSC5D-204ENST00000589020 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
SSC5D-204ENST00000589020 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
SSC5D-204ENST00000589020 CFTRP13569 1480 aa23.32■■□□□ 1.32
SSC5D-204ENST00000589020 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
SSC5D-204ENST00000589020 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
SSC5D-204ENST00000589020 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
SSC5D-204ENST00000589020 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
SSC5D-204ENST00000589020 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
SSC5D-204ENST00000589020 TOP2AP11388 1531 aaKnown RBP23.16■■□□□ 1.3
SSC5D-204ENST00000589020 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
SSC5D-204ENST00000589020 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
SSC5D-204ENST00000589020 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
SSC5D-204ENST00000589020 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
SSC5D-204ENST00000589020 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
SSC5D-204ENST00000589020 CHD1O14646 1710 aa22.98■■□□□ 1.27
SSC5D-204ENST00000589020 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
SSC5D-204ENST00000589020 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
SSC5D-204ENST00000589020 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
SSC5D-204ENST00000589020 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
SSC5D-204ENST00000589020 CYB5RLQ6IPT4 315 aa22.85■■□□□ 1.25
SSC5D-204ENST00000589020 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
SSC5D-204ENST00000589020 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
SSC5D-204ENST00000589020 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.24
SSC5D-204ENST00000589020 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
SSC5D-204ENST00000589020 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
SSC5D-204ENST00000589020 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
SSC5D-204ENST00000589020 FBLN2P98095 1184 aa22.61■■□□□ 1.21
SSC5D-204ENST00000589020 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
SSC5D-204ENST00000589020 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
SSC5D-204ENST00000589020 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
SSC5D-204ENST00000589020 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
SSC5D-204ENST00000589020 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
SSC5D-204ENST00000589020 SOGA1O94964 1423 aa22.48■■□□□ 1.19
SSC5D-204ENST00000589020 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
SSC5D-204ENST00000589020 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
SSC5D-204ENST00000589020 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
SSC5D-204ENST00000589020 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
SSC5D-204ENST00000589020 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
SSC5D-204ENST00000589020 GRIN2BQ13224 1484 aa22.4■■□□□ 1.18
SSC5D-204ENST00000589020 CUX1P39880 1505 aa22.39■■□□□ 1.17
SSC5D-204ENST00000589020 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
SSC5D-204ENST00000589020 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
SSC5D-204ENST00000589020 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
SSC5D-204ENST00000589020 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
SSC5D-204ENST00000589020 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
SSC5D-204ENST00000589020 ABCA10Q8WWZ4 1543 aa22.17■■□□□ 1.14
SSC5D-204ENST00000589020 CEP170Q5SW79 1584 aa22.15■■□□□ 1.14
SSC5D-204ENST00000589020 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
SSC5D-204ENST00000589020 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
SSC5D-204ENST00000589020 ADAMTS12P58397 1594 aa22.13■■□□□ 1.13
SSC5D-204ENST00000589020 NUP160Q12769 1436 aa22.08■■□□□ 1.13
SSC5D-204ENST00000589020 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
SSC5D-204ENST00000589020 FHAD1B1AJZ9 1412 aa21.93■■□□□ 1.1
SSC5D-204ENST00000589020 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
SSC5D-204ENST00000589020 TOP2BQ02880 1626 aa21.9■■□□□ 1.1
SSC5D-204ENST00000589020 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
SSC5D-204ENST00000589020 DIP2BQ9P265 1576 aa21.87■■□□□ 1.09
SSC5D-204ENST00000589020 PRG4Q92954 1404 aaPredicted RBP21.86■■□□□ 1.09
SSC5D-204ENST00000589020 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms