RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 NISCHQ9Y2I1 1504 aa46.05■■■■■ 4.96
PRKAR1A-216ENST00000589017 CCDC180Q9P1Z9 1646 aa41.19■■■■■ 4.18
PRKAR1A-216ENST00000589017 ABCC9O60706 1549 aa40.55■■■■■ 4.08
PRKAR1A-216ENST00000589017 RB1CC1Q8TDY2 1594 aa38.9■■■■□ 3.82
PRKAR1A-216ENST00000589017 NACADO15069 1562 aa38.76■■■■□ 3.8
PRKAR1A-216ENST00000589017 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
PRKAR1A-216ENST00000589017 MYO15BQ96JP2 1530 aa38.42■■■■□ 3.74
PRKAR1A-216ENST00000589017 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
PRKAR1A-216ENST00000589017 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
PRKAR1A-216ENST00000589017 UNC13AQ9UPW8 1703 aa38.07■■■■□ 3.69
PRKAR1A-216ENST00000589017 PABPN1Q86U42 306 aaKnown RBP eCLIP37.76■■■■□ 3.64
PRKAR1A-216ENST00000589017 BICRAQ9NZM4 1560 aa37.74■■■■□ 3.63
PRKAR1A-216ENST00000589017 DNAJC5BQ9UF47 199 aa37.5■■■■□ 3.59
PRKAR1A-216ENST00000589017 SCRIBQ14160 1630 aa37.49■■■■□ 3.59
PRKAR1A-216ENST00000589017 SHROOM4Q9ULL8 1493 aa37.33■■■■□ 3.57
PRKAR1A-216ENST00000589017 EIF4G1Q04637 1599 aaKnown RBP36.77■■■■□ 3.48
PRKAR1A-216ENST00000589017 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
PRKAR1A-216ENST00000589017 CECR2Q9BXF3 1484 aa36.48■■■■□ 3.43
PRKAR1A-216ENST00000589017 SMARCA4P51532 1647 aa35.84■■■■□ 3.33
PRKAR1A-216ENST00000589017 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
PRKAR1A-216ENST00000589017 NCAPD3P42695 1498 aa35.73■■■■□ 3.31
PRKAR1A-216ENST00000589017 ATAD2BQ9ULI0 1458 aa35.7■■■■□ 3.31
PRKAR1A-216ENST00000589017 SMARCA2P51531 1590 aa35.67■■■■□ 3.3
PRKAR1A-216ENST00000589017 HMGXB3Q12766 1538 aa35.57■■■■□ 3.29
PRKAR1A-216ENST00000589017 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.28
PRKAR1A-216ENST00000589017 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
PRKAR1A-216ENST00000589017 BAZ1BQ9UIG0 1483 aaKnown RBP35.39■■■■□ 3.26
PRKAR1A-216ENST00000589017 WIZO95785 1651 aa35.11■■■■□ 3.21
PRKAR1A-216ENST00000589017 NESP48681 1621 aa34.99■■■■□ 3.19
PRKAR1A-216ENST00000589017 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
PRKAR1A-216ENST00000589017 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
PRKAR1A-216ENST00000589017 LAMC3Q9Y6N6 1575 aa34.9■■■■□ 3.18
PRKAR1A-216ENST00000589017 CUX2O14529 1486 aa34.78■■■■□ 3.16
PRKAR1A-216ENST00000589017 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
PRKAR1A-216ENST00000589017 CADPSQ9ULU8 1353 aa34.64■■■■□ 3.14
PRKAR1A-216ENST00000589017 KIF21AQ7Z4S6 1674 aa34.63■■■■□ 3.13
PRKAR1A-216ENST00000589017 PDS5BQ9NTI5 1447 aa34.62■■■■□ 3.13
PRKAR1A-216ENST00000589017 THOC2Q8NI27 1593 aaKnown RBP34.61■■■■□ 3.13
PRKAR1A-216ENST00000589017 CFTRP13569 1480 aa34.39■■■■□ 3.1
PRKAR1A-216ENST00000589017 MRC2Q9UBG0 1479 aa34.32■■■■□ 3.08
PRKAR1A-216ENST00000589017 CEP164Q9UPV0 1460 aa34.28■■■■□ 3.08
PRKAR1A-216ENST00000589017 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
PRKAR1A-216ENST00000589017 CCDC88BA6NC98 1476 aa34.26■■■■□ 3.07
PRKAR1A-216ENST00000589017 WDR62O43379 1518 aa34.24■■■■□ 3.07
PRKAR1A-216ENST00000589017 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
PRKAR1A-216ENST00000589017 DNAJC5Q9H3Z4 198 aa34.07■■■■□ 3.04
PRKAR1A-216ENST00000589017 URB2Q14146 1524 aaKnown RBP33.97■■■■□ 3.03
PRKAR1A-216ENST00000589017 TOPBP1Q92547 1522 aa33.7■■■□□ 2.99
PRKAR1A-216ENST00000589017 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
PRKAR1A-216ENST00000589017 SUPT5HO00267 1087 aaKnown RBP33.66■■■□□ 2.98
PRKAR1A-216ENST00000589017 DNMBPQ6XZF7 1577 aa33.65■■■□□ 2.98
PRKAR1A-216ENST00000589017 IFT140Q96RY7 1462 aa33.56■■■□□ 2.96
PRKAR1A-216ENST00000589017 ZNF608Q9ULD9 1512 aaPredicted RBP33.44■■■□□ 2.94
PRKAR1A-216ENST00000589017 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.94
PRKAR1A-216ENST00000589017 POLA1P09884 1462 aaPredicted RBP33.38■■■□□ 2.93
PRKAR1A-216ENST00000589017 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
PRKAR1A-216ENST00000589017 CUX1P39880 1505 aa33.31■■■□□ 2.92
PRKAR1A-216ENST00000589017 FGD5Q6ZNL6 1462 aa33.25■■■□□ 2.91
PRKAR1A-216ENST00000589017 RAD54L2Q9Y4B4 1467 aa33.22■■■□□ 2.91
PRKAR1A-216ENST00000589017 SOGA1O94964 1423 aa33.2■■■□□ 2.91
PRKAR1A-216ENST00000589017 AQRO60306 1485 aaKnown RBP eCLIP33.18■■■□□ 2.92e-6■■■■■ 37.8
PRKAR1A-216ENST00000589017 OSCARQ8IYS5 282 aa33.18■■■□□ 2.9
PRKAR1A-216ENST00000589017 WDR97A6NE52 1622 aa33.13■■■□□ 2.89
PRKAR1A-216ENST00000589017 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
PRKAR1A-216ENST00000589017 CHD1O14646 1710 aa33.02■■■□□ 2.88
PRKAR1A-216ENST00000589017 BIVM-ERCC5R4GMW8 1640 aa32.98■■■□□ 2.87
PRKAR1A-216ENST00000589017 TOP2BQ02880 1626 aa32.95■■■□□ 2.87
PRKAR1A-216ENST00000589017 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
PRKAR1A-216ENST00000589017 ABCA10Q8WWZ4 1543 aa32.92■■■□□ 2.86
PRKAR1A-216ENST00000589017 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
PRKAR1A-216ENST00000589017 SNAPC4Q5SXM2 1469 aa32.9■■■□□ 2.86
PRKAR1A-216ENST00000589017 GRIN2BQ13224 1484 aa32.89■■■□□ 2.86
PRKAR1A-216ENST00000589017 PBRM1Q86U86 1689 aa32.88■■■□□ 2.85
PRKAR1A-216ENST00000589017 ABCA5Q8WWZ7 1642 aa32.86■■■□□ 2.85
PRKAR1A-216ENST00000589017 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
PRKAR1A-216ENST00000589017 GAPVD1Q14C86 1478 aa32.83■■■□□ 2.85
PRKAR1A-216ENST00000589017 FBLN2P98095 1184 aa32.8■■■□□ 2.84
PRKAR1A-216ENST00000589017 RIMBP3CA6NJZ7 1639 aa32.8■■■□□ 2.84
PRKAR1A-216ENST00000589017 RIMBP3BA6NNM3 1639 aa32.8■■■□□ 2.84
PRKAR1A-216ENST00000589017 RIMBP3Q9UFD9 1639 aa32.8■■■□□ 2.84
PRKAR1A-216ENST00000589017 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
PRKAR1A-216ENST00000589017 ARHGEF11O15085 1522 aa32.73■■■□□ 2.83
PRKAR1A-216ENST00000589017 SYNJ2O15056 1496 aa32.73■■■□□ 2.83
PRKAR1A-216ENST00000589017 CHMP7Q8WUX9 453 aaPredicted RBP32.67■■■□□ 2.82
PRKAR1A-216ENST00000589017 CLASP1Q7Z460 1538 aa32.64■■■□□ 2.82
PRKAR1A-216ENST00000589017 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
PRKAR1A-216ENST00000589017 ERICH3Q5RHP9 1530 aa32.53■■■□□ 2.8
PRKAR1A-216ENST00000589017 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
PRKAR1A-216ENST00000589017 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
PRKAR1A-216ENST00000589017 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
PRKAR1A-216ENST00000589017 CEP170Q5SW79 1584 aa32.36■■■□□ 2.77
PRKAR1A-216ENST00000589017 CYB5RLQ6IPT4 315 aa32.35■■■□□ 2.77
PRKAR1A-216ENST00000589017 NUP160Q12769 1436 aa32.34■■■□□ 2.77
PRKAR1A-216ENST00000589017 KIF27Q86VH2 1401 aa32.26■■■□□ 2.76
PRKAR1A-216ENST00000589017 SHROOM2Q13796 1616 aa32.2■■■□□ 2.75
PRKAR1A-216ENST00000589017 CUL7Q14999 1698 aa32.2■■■□□ 2.74
PRKAR1A-216ENST00000589017 IGF1RP08069 1367 aa32.16■■■□□ 2.74
PRKAR1A-216ENST00000589017 ERCC6L2Q5T890 1561 aa32.13■■■□□ 2.73
PRKAR1A-216ENST00000589017 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
PRKAR1A-216ENST00000589017 CARMIL1Q5VZK9 1371 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms