RNA–Protein interactions for RNA: ENST00000589010.1

ERVK-28-201, Transcript of endogenous retrovirus group K member 28, humanhuman

TSL 5

Gene ERVK-28, Length 308 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK-28-201ENST00000589010 NISCHQ9Y2I1 1504 aa21.61■■□□□ 1.05
ERVK-28-201ENST00000589010 CCDC180Q9P1Z9 1646 aa19.35■□□□□ 0.69
ERVK-28-201ENST00000589010 ABCC9O60706 1549 aa19.14■□□□□ 0.65
ERVK-28-201ENST00000589010 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
ERVK-28-201ENST00000589010 NACADO15069 1562 aa18.2■□□□□ 0.5
ERVK-28-201ENST00000589010 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
ERVK-28-201ENST00000589010 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
ERVK-28-201ENST00000589010 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
ERVK-28-201ENST00000589010 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
ERVK-28-201ENST00000589010 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
ERVK-28-201ENST00000589010 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
ERVK-28-201ENST00000589010 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
ERVK-28-201ENST00000589010 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
ERVK-28-201ENST00000589010 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
ERVK-28-201ENST00000589010 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
ERVK-28-201ENST00000589010 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
ERVK-28-201ENST00000589010 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
ERVK-28-201ENST00000589010 CECR2Q9BXF3 1484 aa17.2■□□□□ 0.34
ERVK-28-201ENST00000589010 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
ERVK-28-201ENST00000589010 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
ERVK-28-201ENST00000589010 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
ERVK-28-201ENST00000589010 NCAPD3P42695 1498 aa16.77■□□□□ 0.28
ERVK-28-201ENST00000589010 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
ERVK-28-201ENST00000589010 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
ERVK-28-201ENST00000589010 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
ERVK-28-201ENST00000589010 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
ERVK-28-201ENST00000589010 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
ERVK-28-201ENST00000589010 WIZO95785 1651 aa16.53■□□□□ 0.24
ERVK-28-201ENST00000589010 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
ERVK-28-201ENST00000589010 NESP48681 1621 aa16.5■□□□□ 0.23
ERVK-28-201ENST00000589010 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
ERVK-28-201ENST00000589010 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
ERVK-28-201ENST00000589010 CUX2O14529 1486 aa16.36■□□□□ 0.21
ERVK-28-201ENST00000589010 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
ERVK-28-201ENST00000589010 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
ERVK-28-201ENST00000589010 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
ERVK-28-201ENST00000589010 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
ERVK-28-201ENST00000589010 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
ERVK-28-201ENST00000589010 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
ERVK-28-201ENST00000589010 CFTRP13569 1480 aa16.14■□□□□ 0.17
ERVK-28-201ENST00000589010 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
ERVK-28-201ENST00000589010 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
ERVK-28-201ENST00000589010 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
ERVK-28-201ENST00000589010 WDR62O43379 1518 aa16.1■□□□□ 0.17
ERVK-28-201ENST00000589010 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
ERVK-28-201ENST00000589010 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
ERVK-28-201ENST00000589010 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
ERVK-28-201ENST00000589010 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
ERVK-28-201ENST00000589010 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
ERVK-28-201ENST00000589010 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
ERVK-28-201ENST00000589010 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
ERVK-28-201ENST00000589010 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
ERVK-28-201ENST00000589010 ZNF608Q9ULD9 1512 aaPredicted RBP15.76■□□□□ 0.11
ERVK-28-201ENST00000589010 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
ERVK-28-201ENST00000589010 TARBP1Q13395 1621 aaKnown RBP15.71■□□□□ 0.11
ERVK-28-201ENST00000589010 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
ERVK-28-201ENST00000589010 CUX1P39880 1505 aa15.66■□□□□ 0.1
ERVK-28-201ENST00000589010 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
ERVK-28-201ENST00000589010 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
ERVK-28-201ENST00000589010 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.09
ERVK-28-201ENST00000589010 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
ERVK-28-201ENST00000589010 SOGA1O94964 1423 aa15.61■□□□□ 0.09
ERVK-28-201ENST00000589010 CHD1O14646 1710 aa15.6■□□□□ 0.09
ERVK-28-201ENST00000589010 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
ERVK-28-201ENST00000589010 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
ERVK-28-201ENST00000589010 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
ERVK-28-201ENST00000589010 FBLN2P98095 1184 aa15.51■□□□□ 0.07
ERVK-28-201ENST00000589010 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
ERVK-28-201ENST00000589010 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
ERVK-28-201ENST00000589010 RIMBP3CA6NJZ7 1639 aa15.49■□□□□ 0.07
ERVK-28-201ENST00000589010 RIMBP3BA6NNM3 1639 aa15.49■□□□□ 0.07
ERVK-28-201ENST00000589010 RIMBP3Q9UFD9 1639 aa15.49■□□□□ 0.07
ERVK-28-201ENST00000589010 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
ERVK-28-201ENST00000589010 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
ERVK-28-201ENST00000589010 TOP2BQ02880 1626 aa15.47■□□□□ 0.07
ERVK-28-201ENST00000589010 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
ERVK-28-201ENST00000589010 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
ERVK-28-201ENST00000589010 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
ERVK-28-201ENST00000589010 ABCA5Q8WWZ7 1642 aa15.45■□□□□ 0.06
ERVK-28-201ENST00000589010 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
ERVK-28-201ENST00000589010 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
ERVK-28-201ENST00000589010 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
ERVK-28-201ENST00000589010 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
ERVK-28-201ENST00000589010 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
ERVK-28-201ENST00000589010 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
ERVK-28-201ENST00000589010 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
ERVK-28-201ENST00000589010 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
ERVK-28-201ENST00000589010 CYB5RLQ6IPT4 315 aa15.29■□□□□ 0.04
ERVK-28-201ENST00000589010 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
ERVK-28-201ENST00000589010 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
ERVK-28-201ENST00000589010 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
ERVK-28-201ENST00000589010 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
ERVK-28-201ENST00000589010 NUP160Q12769 1436 aa15.19■□□□□ 0.02
ERVK-28-201ENST00000589010 ERCC6L2Q5T890 1561 aa15.15■□□□□ 0.02
ERVK-28-201ENST00000589010 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
ERVK-28-201ENST00000589010 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
ERVK-28-201ENST00000589010 CUL7Q14999 1698 aa15.12■□□□□ 0.01
ERVK-28-201ENST00000589010 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
ERVK-28-201ENST00000589010 IGF1RP08069 1367 aa15.1■□□□□ 0.01
ERVK-28-201ENST00000589010 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms