RNA–Protein interactions for RNA: ENST00000588980.5

U2AF1L4-211, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 2

Gene U2AF1L4, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-211ENST00000588980 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
U2AF1L4-211ENST00000588980 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.57
U2AF1L4-211ENST00000588980 ABCC9O60706 1549 aa23.89■■□□□ 1.42
U2AF1L4-211ENST00000588980 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
U2AF1L4-211ENST00000588980 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
U2AF1L4-211ENST00000588980 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
U2AF1L4-211ENST00000588980 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
U2AF1L4-211ENST00000588980 NACADO15069 1562 aa23.24■■□□□ 1.31
U2AF1L4-211ENST00000588980 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
U2AF1L4-211ENST00000588980 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
U2AF1L4-211ENST00000588980 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
U2AF1L4-211ENST00000588980 UNC13AQ9UPW8 1703 aa22.66■■□□□ 1.22
U2AF1L4-211ENST00000588980 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
U2AF1L4-211ENST00000588980 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
U2AF1L4-211ENST00000588980 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
U2AF1L4-211ENST00000588980 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.1
U2AF1L4-211ENST00000588980 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
U2AF1L4-211ENST00000588980 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
U2AF1L4-211ENST00000588980 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
U2AF1L4-211ENST00000588980 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
U2AF1L4-211ENST00000588980 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
U2AF1L4-211ENST00000588980 WIZO95785 1651 aa21.67■■□□□ 1.06
U2AF1L4-211ENST00000588980 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
U2AF1L4-211ENST00000588980 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
U2AF1L4-211ENST00000588980 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
U2AF1L4-211ENST00000588980 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
U2AF1L4-211ENST00000588980 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
U2AF1L4-211ENST00000588980 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
U2AF1L4-211ENST00000588980 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
U2AF1L4-211ENST00000588980 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
U2AF1L4-211ENST00000588980 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
U2AF1L4-211ENST00000588980 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
U2AF1L4-211ENST00000588980 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
U2AF1L4-211ENST00000588980 CFTRP13569 1480 aa20.9■□□□□ 0.94
U2AF1L4-211ENST00000588980 NESP48681 1621 aa20.88■□□□□ 0.93
U2AF1L4-211ENST00000588980 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
U2AF1L4-211ENST00000588980 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
U2AF1L4-211ENST00000588980 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
U2AF1L4-211ENST00000588980 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
U2AF1L4-211ENST00000588980 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
U2AF1L4-211ENST00000588980 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
U2AF1L4-211ENST00000588980 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
U2AF1L4-211ENST00000588980 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
U2AF1L4-211ENST00000588980 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
U2AF1L4-211ENST00000588980 CUX1P39880 1505 aa20.49■□□□□ 0.87
U2AF1L4-211ENST00000588980 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
U2AF1L4-211ENST00000588980 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
U2AF1L4-211ENST00000588980 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
U2AF1L4-211ENST00000588980 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
U2AF1L4-211ENST00000588980 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
U2AF1L4-211ENST00000588980 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
U2AF1L4-211ENST00000588980 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
U2AF1L4-211ENST00000588980 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.85
U2AF1L4-211ENST00000588980 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
U2AF1L4-211ENST00000588980 THOC2Q8NI27 1593 aaKnown RBP20.35■□□□□ 0.85
U2AF1L4-211ENST00000588980 WDR62O43379 1518 aa20.31■□□□□ 0.84
U2AF1L4-211ENST00000588980 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
U2AF1L4-211ENST00000588980 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
U2AF1L4-211ENST00000588980 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
U2AF1L4-211ENST00000588980 CUX2O14529 1486 aa20.21■□□□□ 0.83
U2AF1L4-211ENST00000588980 SOGA1O94964 1423 aa20.2■□□□□ 0.82
U2AF1L4-211ENST00000588980 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
U2AF1L4-211ENST00000588980 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
U2AF1L4-211ENST00000588980 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
U2AF1L4-211ENST00000588980 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
U2AF1L4-211ENST00000588980 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
U2AF1L4-211ENST00000588980 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
U2AF1L4-211ENST00000588980 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
U2AF1L4-211ENST00000588980 ZNF608Q9ULD9 1512 aaPredicted RBP20.05■□□□□ 0.8
U2AF1L4-211ENST00000588980 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
U2AF1L4-211ENST00000588980 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
U2AF1L4-211ENST00000588980 EEA1Q15075 1411 aa20■□□□□ 0.79
U2AF1L4-211ENST00000588980 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
U2AF1L4-211ENST00000588980 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
U2AF1L4-211ENST00000588980 IGF1RP08069 1367 aa19.97■□□□□ 0.79
U2AF1L4-211ENST00000588980 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
U2AF1L4-211ENST00000588980 EIF4G3O43432 1585 aaKnown RBP19.91■□□□□ 0.78
U2AF1L4-211ENST00000588980 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
U2AF1L4-211ENST00000588980 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
U2AF1L4-211ENST00000588980 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
U2AF1L4-211ENST00000588980 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
U2AF1L4-211ENST00000588980 PRXQ9BXM0 1461 aa19.85■□□□□ 0.77
U2AF1L4-211ENST00000588980 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
U2AF1L4-211ENST00000588980 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
U2AF1L4-211ENST00000588980 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
U2AF1L4-211ENST00000588980 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
U2AF1L4-211ENST00000588980 KIF21BO75037 1637 aa19.78■□□□□ 0.76
U2AF1L4-211ENST00000588980 CUL7Q14999 1698 aa19.75■□□□□ 0.75
U2AF1L4-211ENST00000588980 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
U2AF1L4-211ENST00000588980 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
U2AF1L4-211ENST00000588980 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
U2AF1L4-211ENST00000588980 GOLGA3Q08378 1498 aa19.72■□□□□ 0.75
U2AF1L4-211ENST00000588980 UBTFP17480 764 aaKnown RBP19.68■□□□□ 0.74
U2AF1L4-211ENST00000588980 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
U2AF1L4-211ENST00000588980 FBLN2P98095 1184 aa19.64■□□□□ 0.74
U2AF1L4-211ENST00000588980 CHMP7Q8WUX9 453 aaPredicted RBP19.64■□□□□ 0.74
U2AF1L4-211ENST00000588980 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
U2AF1L4-211ENST00000588980 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
U2AF1L4-211ENST00000588980 HRCP23327 699 aa19.6■□□□□ 0.73
U2AF1L4-211ENST00000588980 CHD1O14646 1710 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms