RNA–Protein interactions for RNA: ENST00000588963.1

MRPL4-205, Transcript of mitochondrial ribosomal protein L4, humanhuman

TSL 2

Gene MRPL4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-205ENST00000588963 NISCHQ9Y2I1 1504 aa45.36■■■■■ 4.85
MRPL4-205ENST00000588963 CCDC180Q9P1Z9 1646 aa40.42■■■■■ 4.06
MRPL4-205ENST00000588963 ABCC9O60706 1549 aa40.27■■■■■ 4.04
MRPL4-205ENST00000588963 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
MRPL4-205ENST00000588963 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
MRPL4-205ENST00000588963 NACADO15069 1562 aa38.17■■■■□ 3.7
MRPL4-205ENST00000588963 MYO15BQ96JP2 1530 aa37.69■■■■□ 3.62
MRPL4-205ENST00000588963 PABPN1Q86U42 306 aaKnown RBP eCLIP37.65■■■■□ 3.62
MRPL4-205ENST00000588963 ZCCHC6Q5VYS8 1495 aaKnown RBP37.64■■■■□ 3.62
MRPL4-205ENST00000588963 DNAJC5BQ9UF47 199 aa37.51■■■■□ 3.6
MRPL4-205ENST00000588963 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
MRPL4-205ENST00000588963 DCAF1Q9Y4B6 1507 aa37.38■■■■□ 3.57
MRPL4-205ENST00000588963 BICRAQ9NZM4 1560 aa37.27■■■■□ 3.56
MRPL4-205ENST00000588963 SCRIBQ14160 1630 aa37.03■■■■□ 3.52
MRPL4-205ENST00000588963 SHROOM4Q9ULL8 1493 aa36.64■■■■□ 3.46
MRPL4-205ENST00000588963 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
MRPL4-205ENST00000588963 CC2D2AQ9P2K1 1620 aa36.32■■■■□ 3.4
MRPL4-205ENST00000588963 CECR2Q9BXF3 1484 aa36.18■■■■□ 3.38
MRPL4-205ENST00000588963 SMARCA4P51532 1647 aa35.29■■■■□ 3.24
MRPL4-205ENST00000588963 NCAPD3P42695 1498 aa35.27■■■■□ 3.24
MRPL4-205ENST00000588963 ATAD2BQ9ULI0 1458 aa35.26■■■■□ 3.23
MRPL4-205ENST00000588963 BAZ1AQ9NRL2 1556 aaPredicted RBP35.15■■■■□ 3.22
MRPL4-205ENST00000588963 SMARCA2P51531 1590 aa35.12■■■■□ 3.21
MRPL4-205ENST00000588963 MROH2BQ7Z745 1585 aa35.01■■■■□ 3.2
MRPL4-205ENST00000588963 HMGXB3Q12766 1538 aa35■■■■□ 3.19
MRPL4-205ENST00000588963 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
MRPL4-205ENST00000588963 PEG3Q9GZU2 1588 aa34.87■■■■□ 3.17
MRPL4-205ENST00000588963 NESP48681 1621 aa34.71■■■■□ 3.15
MRPL4-205ENST00000588963 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
MRPL4-205ENST00000588963 WIZO95785 1651 aa34.61■■■■□ 3.13
MRPL4-205ENST00000588963 RSF1Q96T23 1441 aaPredicted RBP34.42■■■■□ 3.1
MRPL4-205ENST00000588963 CUX2O14529 1486 aa34.41■■■■□ 3.1
MRPL4-205ENST00000588963 LAMC3Q9Y6N6 1575 aa34.38■■■■□ 3.09
MRPL4-205ENST00000588963 CADPSQ9ULU8 1353 aa34.26■■■■□ 3.08
MRPL4-205ENST00000588963 PDS5BQ9NTI5 1447 aa34.22■■■■□ 3.07
MRPL4-205ENST00000588963 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
MRPL4-205ENST00000588963 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
MRPL4-205ENST00000588963 TOP2AP11388 1531 aaKnown RBP34.13■■■■□ 3.05
MRPL4-205ENST00000588963 DNAJC5Q9H3Z4 198 aa34.08■■■■□ 3.05
MRPL4-205ENST00000588963 CFTRP13569 1480 aa33.92■■■■□ 3.02
MRPL4-205ENST00000588963 MRC2Q9UBG0 1479 aa33.91■■■■□ 3.02
MRPL4-205ENST00000588963 FANCD2Q9BXW9 1451 aa33.88■■■■□ 3.01
MRPL4-205ENST00000588963 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
MRPL4-205ENST00000588963 CCDC88BA6NC98 1476 aa33.82■■■■□ 3
MRPL4-205ENST00000588963 WDR62O43379 1518 aa33.78■■■■□ 3
MRPL4-205ENST00000588963 URB2Q14146 1524 aaKnown RBP33.58■■■□□ 2.97
MRPL4-205ENST00000588963 PRDM2Q13029 1718 aa33.51■■■□□ 2.96
MRPL4-205ENST00000588963 SUPT5HO00267 1087 aaKnown RBP33.36■■■□□ 2.93
MRPL4-205ENST00000588963 TOPBP1Q92547 1522 aa33.28■■■□□ 2.92
MRPL4-205ENST00000588963 ABCC8Q09428 1581 aa33.15■■■□□ 2.9
MRPL4-205ENST00000588963 DNMBPQ6XZF7 1577 aa33.15■■■□□ 2.9
MRPL4-205ENST00000588963 IFT140Q96RY7 1462 aa33.15■■■□□ 2.9
MRPL4-205ENST00000588963 ZNF608Q9ULD9 1512 aaPredicted RBP33.15■■■□□ 2.9
MRPL4-205ENST00000588963 OSCARQ8IYS5 282 aa33.03■■■□□ 2.88
MRPL4-205ENST00000588963 POLA1P09884 1462 aaPredicted RBP32.96■■■□□ 2.87
MRPL4-205ENST00000588963 AQRO60306 1485 aaKnown RBP eCLIP32.92■■■□□ 2.86
MRPL4-205ENST00000588963 TARBP1Q13395 1621 aaKnown RBP32.91■■■□□ 2.86
MRPL4-205ENST00000588963 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
MRPL4-205ENST00000588963 EIF4G3O43432 1585 aaKnown RBP32.9■■■□□ 2.86
MRPL4-205ENST00000588963 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
MRPL4-205ENST00000588963 CUX1P39880 1505 aa32.86■■■□□ 2.85
MRPL4-205ENST00000588963 SOGA1O94964 1423 aa32.85■■■□□ 2.85
MRPL4-205ENST00000588963 FGD5Q6ZNL6 1462 aa32.83■■■□□ 2.85
MRPL4-205ENST00000588963 TDRD9Q8NDG6 1382 aaKnown RBP32.8■■■□□ 2.84
MRPL4-205ENST00000588963 FBLN2P98095 1184 aa32.7■■■□□ 2.83
MRPL4-205ENST00000588963 CHD1O14646 1710 aa32.6■■■□□ 2.81
MRPL4-205ENST00000588963 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
MRPL4-205ENST00000588963 RIMBP3CA6NJZ7 1639 aa32.5■■■□□ 2.79
MRPL4-205ENST00000588963 RIMBP3BA6NNM3 1639 aa32.5■■■□□ 2.79
MRPL4-205ENST00000588963 RIMBP3Q9UFD9 1639 aa32.5■■■□□ 2.79
MRPL4-205ENST00000588963 WDR97A6NE52 1622 aa32.48■■■□□ 2.79
MRPL4-205ENST00000588963 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
MRPL4-205ENST00000588963 WRNQ14191 1432 aaPredicted RBP eCLIP32.45■■■□□ 2.79
MRPL4-205ENST00000588963 CHMP7Q8WUX9 453 aaPredicted RBP32.45■■■□□ 2.79
MRPL4-205ENST00000588963 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
MRPL4-205ENST00000588963 ARHGEF11O15085 1522 aa32.44■■■□□ 2.78
MRPL4-205ENST00000588963 ABCA10Q8WWZ4 1543 aa32.42■■■□□ 2.78
MRPL4-205ENST00000588963 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
MRPL4-205ENST00000588963 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
MRPL4-205ENST00000588963 TOP2BQ02880 1626 aa32.37■■■□□ 2.77
MRPL4-205ENST00000588963 BIVM-ERCC5R4GMW8 1640 aa32.36■■■□□ 2.77
MRPL4-205ENST00000588963 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
MRPL4-205ENST00000588963 ABCA5Q8WWZ7 1642 aa32.32■■■□□ 2.76
MRPL4-205ENST00000588963 SYNJ2O15056 1496 aa32.31■■■□□ 2.76
MRPL4-205ENST00000588963 CYB5RLQ6IPT4 315 aa32.31■■■□□ 2.76
MRPL4-205ENST00000588963 CLASP1Q7Z460 1538 aa32.21■■■□□ 2.75
MRPL4-205ENST00000588963 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
MRPL4-205ENST00000588963 ADAMTS12P58397 1594 aa32.07■■■□□ 2.72
MRPL4-205ENST00000588963 GRIN2AQ12879 1464 aa32.06■■■□□ 2.72
MRPL4-205ENST00000588963 FHAD1B1AJZ9 1412 aa32.02■■■□□ 2.72
MRPL4-205ENST00000588963 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
MRPL4-205ENST00000588963 CEP170Q5SW79 1584 aa31.94■■■□□ 2.7
MRPL4-205ENST00000588963 NUP160Q12769 1436 aa31.92■■■□□ 2.7
MRPL4-205ENST00000588963 TRHP20396 242 aaPredicted RBP31.84■■■□□ 2.69
MRPL4-205ENST00000588963 ERCC6L2Q5T890 1561 aa31.84■■■□□ 2.69
MRPL4-205ENST00000588963 KIF27Q86VH2 1401 aa31.8■■■□□ 2.68
MRPL4-205ENST00000588963 IGF1RP08069 1367 aa31.79■■■□□ 2.68
MRPL4-205ENST00000588963 JPH4Q96JJ6 628 aa31.7■■■□□ 2.67
MRPL4-205ENST00000588963 SHROOM2Q13796 1616 aa31.69■■■□□ 2.66
MRPL4-205ENST00000588963 PRG4Q92954 1404 aaPredicted RBP31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms