RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 NISCHQ9Y2I1 1504 aa37.86■■■■□ 3.65
GCDH-208ENST00000588905 CCDC180Q9P1Z9 1646 aa34.05■■■■□ 3.04
GCDH-208ENST00000588905 ABCC9O60706 1549 aa33.89■■■■□ 3.02
GCDH-208ENST00000588905 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
GCDH-208ENST00000588905 NACADO15069 1562 aa32.07■■■□□ 2.72
GCDH-208ENST00000588905 UNC13AQ9UPW8 1703 aa31.82■■■□□ 2.68
GCDH-208ENST00000588905 DNAJC5BQ9UF47 199 aa31.79■■■□□ 2.68
GCDH-208ENST00000588905 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
GCDH-208ENST00000588905 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
GCDH-208ENST00000588905 BICRAQ9NZM4 1560 aa31.5■■■□□ 2.63
GCDH-208ENST00000588905 PABPN1Q86U42 306 aaKnown RBP eCLIP31.47■■■□□ 2.63
GCDH-208ENST00000588905 ZCCHC6Q5VYS8 1495 aaKnown RBP31.43■■■□□ 2.62
GCDH-208ENST00000588905 DCAF1Q9Y4B6 1507 aa31.28■■■□□ 2.6
GCDH-208ENST00000588905 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
GCDH-208ENST00000588905 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
GCDH-208ENST00000588905 CC2D2AQ9P2K1 1620 aa30.69■■■□□ 2.5
GCDH-208ENST00000588905 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
GCDH-208ENST00000588905 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
GCDH-208ENST00000588905 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
GCDH-208ENST00000588905 NCAPD3P42695 1498 aa29.58■■■□□ 2.33
GCDH-208ENST00000588905 ATAD2BQ9ULI0 1458 aa29.53■■■□□ 2.32
GCDH-208ENST00000588905 HMGXB3Q12766 1538 aa29.44■■■□□ 2.3
GCDH-208ENST00000588905 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
GCDH-208ENST00000588905 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
GCDH-208ENST00000588905 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
GCDH-208ENST00000588905 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
GCDH-208ENST00000588905 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.26
GCDH-208ENST00000588905 NESP48681 1621 aa29.2■■■□□ 2.26
GCDH-208ENST00000588905 CUX2O14529 1486 aa29.17■■■□□ 2.26
GCDH-208ENST00000588905 ERCC6Q03468 1493 aa29.16■■■□□ 2.26
GCDH-208ENST00000588905 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
GCDH-208ENST00000588905 THOC2Q8NI27 1593 aaKnown RBP28.97■■■□□ 2.23
GCDH-208ENST00000588905 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
GCDH-208ENST00000588905 KIF21AQ7Z4S6 1674 aa28.92■■■□□ 2.22
GCDH-208ENST00000588905 WIZO95785 1651 aa28.91■■■□□ 2.22
GCDH-208ENST00000588905 RSF1Q96T23 1441 aaPredicted RBP28.71■■■□□ 2.19
GCDH-208ENST00000588905 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
GCDH-208ENST00000588905 CADPSQ9ULU8 1353 aa28.63■■■□□ 2.17
GCDH-208ENST00000588905 WDR62O43379 1518 aa28.5■■■□□ 2.15
GCDH-208ENST00000588905 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
GCDH-208ENST00000588905 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
GCDH-208ENST00000588905 CFTRP13569 1480 aa28.38■■■□□ 2.13
GCDH-208ENST00000588905 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
GCDH-208ENST00000588905 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
GCDH-208ENST00000588905 PRDM2Q13029 1718 aa28.3■■■□□ 2.12
GCDH-208ENST00000588905 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
GCDH-208ENST00000588905 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
GCDH-208ENST00000588905 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
GCDH-208ENST00000588905 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
GCDH-208ENST00000588905 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
GCDH-208ENST00000588905 IFT140Q96RY7 1462 aa27.79■■■□□ 2.04
GCDH-208ENST00000588905 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
GCDH-208ENST00000588905 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
GCDH-208ENST00000588905 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
GCDH-208ENST00000588905 TARBP1Q13395 1621 aaKnown RBP27.71■■■□□ 2.03
GCDH-208ENST00000588905 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
GCDH-208ENST00000588905 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
GCDH-208ENST00000588905 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
GCDH-208ENST00000588905 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
GCDH-208ENST00000588905 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
GCDH-208ENST00000588905 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
GCDH-208ENST00000588905 CHD1O14646 1710 aa27.58■■■□□ 2.01
GCDH-208ENST00000588905 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 2
GCDH-208ENST00000588905 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
GCDH-208ENST00000588905 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
GCDH-208ENST00000588905 CUX1P39880 1505 aa27.45■■□□□ 1.98
GCDH-208ENST00000588905 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
GCDH-208ENST00000588905 WDR97A6NE52 1622 aa27.39■■□□□ 1.98
GCDH-208ENST00000588905 SOGA1O94964 1423 aa27.35■■□□□ 1.97
GCDH-208ENST00000588905 TDRD9Q8NDG6 1382 aaKnown RBP27.32■■□□□ 1.96
GCDH-208ENST00000588905 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
GCDH-208ENST00000588905 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
GCDH-208ENST00000588905 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
GCDH-208ENST00000588905 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
GCDH-208ENST00000588905 MAGI1Q96QZ7 1491 aaPredicted RBP27.17■■□□□ 1.94
GCDH-208ENST00000588905 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
GCDH-208ENST00000588905 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
GCDH-208ENST00000588905 FBLN2P98095 1184 aa27.15■■□□□ 1.94
GCDH-208ENST00000588905 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
GCDH-208ENST00000588905 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
GCDH-208ENST00000588905 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
GCDH-208ENST00000588905 SYNJ2O15056 1496 aa27.07■■□□□ 1.92
GCDH-208ENST00000588905 BIVM-ERCC5R4GMW8 1640 aa27.07■■□□□ 1.92
GCDH-208ENST00000588905 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
GCDH-208ENST00000588905 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
GCDH-208ENST00000588905 TOP2BQ02880 1626 aa27.01■■□□□ 1.91
GCDH-208ENST00000588905 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
GCDH-208ENST00000588905 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
GCDH-208ENST00000588905 GRIN2AQ12879 1464 aa26.85■■□□□ 1.89
GCDH-208ENST00000588905 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
GCDH-208ENST00000588905 ERCC6L2Q5T890 1561 aa26.83■■□□□ 1.89
GCDH-208ENST00000588905 NUP160Q12769 1436 aa26.77■■□□□ 1.88
GCDH-208ENST00000588905 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
GCDH-208ENST00000588905 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
GCDH-208ENST00000588905 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
GCDH-208ENST00000588905 TRHP20396 242 aaPredicted RBP26.68■■□□□ 1.86
GCDH-208ENST00000588905 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
GCDH-208ENST00000588905 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
GCDH-208ENST00000588905 IGF1RP08069 1367 aa26.49■■□□□ 1.83
GCDH-208ENST00000588905 PRG4Q92954 1404 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms