RNA–Protein interactions for RNA: ENST00000588894.1

SMIM22-205, Transcript of small integral membrane protein 22, humanhuman

Gene SMIM22, Length 609 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-205ENST00000588894 NISCHQ9Y2I1 1504 aa47.02■■■■■ 5.12
SMIM22-205ENST00000588894 CCDC180Q9P1Z9 1646 aa41.85■■■■■ 4.29
SMIM22-205ENST00000588894 ABCC9O60706 1549 aa40.65■■■■■ 4.1
SMIM22-205ENST00000588894 RB1CC1Q8TDY2 1594 aa39.26■■■■□ 3.88
SMIM22-205ENST00000588894 NACADO15069 1562 aa39.25■■■■□ 3.87
SMIM22-205ENST00000588894 ZCCHC6Q5VYS8 1495 aaKnown RBP39.2■■■■□ 3.87
SMIM22-205ENST00000588894 DCAF8L2P0C7V8 631 aa39.11■■■■□ 3.85
SMIM22-205ENST00000588894 MYO15BQ96JP2 1530 aa39.08■■■■□ 3.85
SMIM22-205ENST00000588894 DCAF1Q9Y4B6 1507 aa38.96■■■■□ 3.83
SMIM22-205ENST00000588894 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
SMIM22-205ENST00000588894 SCRIBQ14160 1630 aa38.09■■■■□ 3.69
SMIM22-205ENST00000588894 BICRAQ9NZM4 1560 aa38.05■■■■□ 3.68
SMIM22-205ENST00000588894 PABPN1Q86U42 306 aaKnown RBP eCLIP37.95■■■■□ 3.67
SMIM22-205ENST00000588894 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
SMIM22-205ENST00000588894 DNAJC5BQ9UF47 199 aa37.13■■■■□ 3.53
SMIM22-205ENST00000588894 EIF4G1Q04637 1599 aaKnown RBP37.03■■■■□ 3.52
SMIM22-205ENST00000588894 CC2D2AQ9P2K1 1620 aa36.85■■■■□ 3.49
SMIM22-205ENST00000588894 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
SMIM22-205ENST00000588894 SMARCA4P51532 1647 aa36.49■■■■□ 3.43
SMIM22-205ENST00000588894 BAZ1AQ9NRL2 1556 aaPredicted RBP36.45■■■■□ 3.43
SMIM22-205ENST00000588894 SMARCA2P51531 1590 aa36.22■■■■□ 3.39
SMIM22-205ENST00000588894 MROH2BQ7Z745 1585 aa36.22■■■■□ 3.39
SMIM22-205ENST00000588894 ATAD2BQ9ULI0 1458 aa36.2■■■■□ 3.39
SMIM22-205ENST00000588894 NCAPD3P42695 1498 aa36.18■■■■□ 3.38
SMIM22-205ENST00000588894 PEG3Q9GZU2 1588 aa36.15■■■■□ 3.38
SMIM22-205ENST00000588894 HMGXB3Q12766 1538 aa36.05■■■■□ 3.36
SMIM22-205ENST00000588894 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
SMIM22-205ENST00000588894 WIZO95785 1651 aa35.88■■■■□ 3.33
SMIM22-205ENST00000588894 RSF1Q96T23 1441 aaPredicted RBP35.84■■■■□ 3.33
SMIM22-205ENST00000588894 TOP2AP11388 1531 aaKnown RBP35.5■■■■□ 3.27
SMIM22-205ENST00000588894 LAMC3Q9Y6N6 1575 aa35.25■■■■□ 3.23
SMIM22-205ENST00000588894 NESP48681 1621 aa35.22■■■■□ 3.23
SMIM22-205ENST00000588894 CADPSQ9ULU8 1353 aa35.11■■■■□ 3.21
SMIM22-205ENST00000588894 CCDC88BA6NC98 1476 aa35.04■■■■□ 3.2
SMIM22-205ENST00000588894 ERCC6Q03468 1493 aa35.04■■■■□ 3.2
SMIM22-205ENST00000588894 SUPT5HO00267 1087 aaKnown RBP34.98■■■■□ 3.19
SMIM22-205ENST00000588894 PDS5BQ9NTI5 1447 aa34.95■■■■□ 3.19
SMIM22-205ENST00000588894 CFTRP13569 1480 aa34.95■■■■□ 3.19
SMIM22-205ENST00000588894 KIF21AQ7Z4S6 1674 aa34.93■■■■□ 3.18
SMIM22-205ENST00000588894 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
SMIM22-205ENST00000588894 THOC2Q8NI27 1593 aaKnown RBP34.74■■■■□ 3.15
SMIM22-205ENST00000588894 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
SMIM22-205ENST00000588894 CUX2O14529 1486 aa34.66■■■■□ 3.14
SMIM22-205ENST00000588894 CEP164Q9UPV0 1460 aa34.66■■■■□ 3.14
SMIM22-205ENST00000588894 MRC2Q9UBG0 1479 aa34.58■■■■□ 3.13
SMIM22-205ENST00000588894 WDR62O43379 1518 aa34.5■■■■□ 3.11
SMIM22-205ENST00000588894 URB2Q14146 1524 aaKnown RBP34.35■■■■□ 3.09
SMIM22-205ENST00000588894 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
SMIM22-205ENST00000588894 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
SMIM22-205ENST00000588894 TOPBP1Q92547 1522 aa34.19■■■■□ 3.06
SMIM22-205ENST00000588894 CUX1P39880 1505 aa33.98■■■■□ 3.03
SMIM22-205ENST00000588894 IFT140Q96RY7 1462 aa33.94■■■■□ 3.02
SMIM22-205ENST00000588894 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
SMIM22-205ENST00000588894 TARBP1Q13395 1621 aaKnown RBP33.85■■■■□ 3.01
SMIM22-205ENST00000588894 FGD5Q6ZNL6 1462 aa33.83■■■■□ 3.01
SMIM22-205ENST00000588894 WRNQ14191 1432 aaPredicted RBP eCLIP33.8■■■■□ 3
SMIM22-205ENST00000588894 BIVM-ERCC5R4GMW8 1640 aa33.8■■■■□ 3
SMIM22-205ENST00000588894 TOP2BQ02880 1626 aa33.78■■■■□ 3
SMIM22-205ENST00000588894 SOGA1O94964 1423 aa33.74■■■□□ 2.99
SMIM22-205ENST00000588894 SYNJ1O43426 1573 aa33.73■■■□□ 2.99
SMIM22-205ENST00000588894 ZNF608Q9ULD9 1512 aaPredicted RBP33.73■■■□□ 2.99
SMIM22-205ENST00000588894 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
SMIM22-205ENST00000588894 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
SMIM22-205ENST00000588894 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
SMIM22-205ENST00000588894 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.96
SMIM22-205ENST00000588894 ABCA10Q8WWZ4 1543 aa33.53■■■□□ 2.96
SMIM22-205ENST00000588894 TDRD9Q8NDG6 1382 aaKnown RBP33.5■■■□□ 2.95
SMIM22-205ENST00000588894 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
SMIM22-205ENST00000588894 PBRM1Q86U86 1689 aa33.4■■■□□ 2.94
SMIM22-205ENST00000588894 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
SMIM22-205ENST00000588894 DNAJC5Q9H3Z4 198 aa33.37■■■□□ 2.93
SMIM22-205ENST00000588894 GRIN2BQ13224 1484 aa33.35■■■□□ 2.93
SMIM22-205ENST00000588894 CHD1O14646 1710 aa33.28■■■□□ 2.92
SMIM22-205ENST00000588894 MAGI1Q96QZ7 1491 aaPredicted RBP33.27■■■□□ 2.92
SMIM22-205ENST00000588894 SNAPC4Q5SXM2 1469 aa33.26■■■□□ 2.92
SMIM22-205ENST00000588894 OSCARQ8IYS5 282 aa33.21■■■□□ 2.91
SMIM22-205ENST00000588894 ERICH3Q5RHP9 1530 aa33.16■■■□□ 2.9
SMIM22-205ENST00000588894 SYNJ2O15056 1496 aa33.13■■■□□ 2.89
SMIM22-205ENST00000588894 FBLN2P98095 1184 aa33.09■■■□□ 2.89
SMIM22-205ENST00000588894 KIF27Q86VH2 1401 aa33.09■■■□□ 2.89
SMIM22-205ENST00000588894 ADAMTS12P58397 1594 aa33.08■■■□□ 2.89
SMIM22-205ENST00000588894 CHMP7Q8WUX9 453 aaPredicted RBP33.06■■■□□ 2.88
SMIM22-205ENST00000588894 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
SMIM22-205ENST00000588894 FHAD1B1AJZ9 1412 aa32.99■■■□□ 2.87
SMIM22-205ENST00000588894 CUL7Q14999 1698 aa32.93■■■□□ 2.86
SMIM22-205ENST00000588894 GRIN2AQ12879 1464 aa32.93■■■□□ 2.86
SMIM22-205ENST00000588894 IGF1RP08069 1367 aa32.91■■■□□ 2.86
SMIM22-205ENST00000588894 CLASP1Q7Z460 1538 aa32.86■■■□□ 2.85
SMIM22-205ENST00000588894 RUSC2Q8N2Y8 1516 aa32.8■■■□□ 2.84
SMIM22-205ENST00000588894 NUP160Q12769 1436 aa32.77■■■□□ 2.84
SMIM22-205ENST00000588894 CEP170Q5SW79 1584 aa32.77■■■□□ 2.84
SMIM22-205ENST00000588894 CHIC1Q5VXU3 224 aa32.76■■■□□ 2.83
SMIM22-205ENST00000588894 CARMIL1Q5VZK9 1371 aa32.72■■■□□ 2.83
SMIM22-205ENST00000588894 RIMBP3CA6NJZ7 1639 aa32.72■■■□□ 2.83
SMIM22-205ENST00000588894 RIMBP3BA6NNM3 1639 aa32.72■■■□□ 2.83
SMIM22-205ENST00000588894 RIMBP3Q9UFD9 1639 aa32.72■■■□□ 2.83
SMIM22-205ENST00000588894 ARHGEF11O15085 1522 aa32.7■■■□□ 2.83
SMIM22-205ENST00000588894 EEA1Q15075 1411 aa32.58■■■□□ 2.81
SMIM22-205ENST00000588894 SHROOM2Q13796 1616 aa32.58■■■□□ 2.81
SMIM22-205ENST00000588894 RAPGEF2Q9Y4G8 1499 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms