RNA–Protein interactions for RNA: ENST00000588833.1

PLEKHF1-203, Transcript of pleckstrin homology and FYVE domain containing 1, humanhuman

TSL 4

Gene PLEKHF1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHF1-203ENST00000588833 NISCHQ9Y2I1 1504 aa51.92■■■■■ 5.9
PLEKHF1-203ENST00000588833 CCDC180Q9P1Z9 1646 aa46.17■■■■■ 4.98
PLEKHF1-203ENST00000588833 ABCC9O60706 1549 aa45.44■■■■■ 4.86
PLEKHF1-203ENST00000588833 RB1CC1Q8TDY2 1594 aa43.63■■■■■ 4.58
PLEKHF1-203ENST00000588833 DCAF8L2P0C7V8 631 aa43.61■■■■■ 4.57
PLEKHF1-203ENST00000588833 NACADO15069 1562 aa43.55■■■■■ 4.56
PLEKHF1-203ENST00000588833 MYO15BQ96JP2 1530 aa43.25■■■■■ 4.51
PLEKHF1-203ENST00000588833 ZCCHC6Q5VYS8 1495 aaKnown RBP43.17■■■■■ 4.5
PLEKHF1-203ENST00000588833 DNAJC5BQ9UF47 199 aa42.97■■■■■ 4.47
PLEKHF1-203ENST00000588833 DCAF1Q9Y4B6 1507 aa42.97■■■■■ 4.47
PLEKHF1-203ENST00000588833 PABPN1Q86U42 306 aaKnown RBP eCLIP42.49■■■■■ 4.39
PLEKHF1-203ENST00000588833 UNC13AQ9UPW8 1703 aa42.43■■■■■ 4.38
PLEKHF1-203ENST00000588833 BICRAQ9NZM4 1560 aa42.23■■■■■ 4.35
PLEKHF1-203ENST00000588833 SCRIBQ14160 1630 aa42.1■■■■■ 4.33
PLEKHF1-203ENST00000588833 SHROOM4Q9ULL8 1493 aa41.9■■■■■ 4.3
PLEKHF1-203ENST00000588833 EIF4G1Q04637 1599 aaKnown RBP41.19■■■■■ 4.18
PLEKHF1-203ENST00000588833 CC2D2AQ9P2K1 1620 aa41.05■■■■■ 4.16
PLEKHF1-203ENST00000588833 CECR2Q9BXF3 1484 aa40.89■■■■■ 4.14
PLEKHF1-203ENST00000588833 SMARCA4P51532 1647 aa40.27■■■■■ 4.04
PLEKHF1-203ENST00000588833 BAZ1AQ9NRL2 1556 aaPredicted RBP40.27■■■■■ 4.04
PLEKHF1-203ENST00000588833 NCAPD3P42695 1498 aa40.23■■■■■ 4.03
PLEKHF1-203ENST00000588833 ATAD2BQ9ULI0 1458 aa40.18■■■■■ 4.02
PLEKHF1-203ENST00000588833 SMARCA2P51531 1590 aa40.13■■■■■ 4.01
PLEKHF1-203ENST00000588833 DNAJC5Q9H3Z4 198 aa40.11■■■■■ 4.01
PLEKHF1-203ENST00000588833 MROH2BQ7Z745 1585 aa39.97■■■■□ 3.99
PLEKHF1-203ENST00000588833 HMGXB3Q12766 1538 aa39.94■■■■□ 3.98
PLEKHF1-203ENST00000588833 PEG3Q9GZU2 1588 aa39.92■■■■□ 3.98
PLEKHF1-203ENST00000588833 BAZ1BQ9UIG0 1483 aaKnown RBP39.84■■■■□ 3.97
PLEKHF1-203ENST00000588833 RSF1Q96T23 1441 aaPredicted RBP39.49■■■■□ 3.91
PLEKHF1-203ENST00000588833 WIZO95785 1651 aa39.48■■■■□ 3.91
PLEKHF1-203ENST00000588833 ERCC6Q03468 1493 aa39.24■■■■□ 3.87
PLEKHF1-203ENST00000588833 NESP48681 1621 aa39.22■■■■□ 3.87
PLEKHF1-203ENST00000588833 LAMC3Q9Y6N6 1575 aa39.14■■■■□ 3.86
PLEKHF1-203ENST00000588833 TOP2AP11388 1531 aaKnown RBP39.11■■■■□ 3.85
PLEKHF1-203ENST00000588833 CADPSQ9ULU8 1353 aa39.07■■■■□ 3.84
PLEKHF1-203ENST00000588833 PDS5BQ9NTI5 1447 aa38.99■■■■□ 3.83
PLEKHF1-203ENST00000588833 CUX2O14529 1486 aa38.89■■■■□ 3.82
PLEKHF1-203ENST00000588833 CFTRP13569 1480 aa38.74■■■■□ 3.79
PLEKHF1-203ENST00000588833 CCDC88BA6NC98 1476 aa38.69■■■■□ 3.78
PLEKHF1-203ENST00000588833 KIF21AQ7Z4S6 1674 aa38.67■■■■□ 3.78
PLEKHF1-203ENST00000588833 THOC2Q8NI27 1593 aaKnown RBP38.62■■■■□ 3.77
PLEKHF1-203ENST00000588833 FANCD2Q9BXW9 1451 aa38.56■■■■□ 3.76
PLEKHF1-203ENST00000588833 CEP164Q9UPV0 1460 aa38.54■■■■□ 3.76
PLEKHF1-203ENST00000588833 MRC2Q9UBG0 1479 aa38.52■■■■□ 3.76
PLEKHF1-203ENST00000588833 SUPT5HO00267 1087 aaKnown RBP38.42■■■■□ 3.74
PLEKHF1-203ENST00000588833 WDR62O43379 1518 aa38.36■■■■□ 3.73
PLEKHF1-203ENST00000588833 PRDM2Q13029 1718 aa38.24■■■■□ 3.71
PLEKHF1-203ENST00000588833 URB2Q14146 1524 aaKnown RBP38.14■■■■□ 3.7
PLEKHF1-203ENST00000588833 TRIM41Q8WV44 630 aa38.02■■■■□ 3.68
PLEKHF1-203ENST00000588833 ABCC8Q09428 1581 aa37.98■■■■□ 3.67
PLEKHF1-203ENST00000588833 TOPBP1Q92547 1522 aa37.9■■■■□ 3.66
PLEKHF1-203ENST00000588833 DNMBPQ6XZF7 1577 aa37.82■■■■□ 3.65
PLEKHF1-203ENST00000588833 IFT140Q96RY7 1462 aa37.77■■■■□ 3.64
PLEKHF1-203ENST00000588833 POLA1P09884 1462 aaPredicted RBP37.57■■■■□ 3.6
PLEKHF1-203ENST00000588833 ZNF608Q9ULD9 1512 aaPredicted RBP37.54■■■■□ 3.6
PLEKHF1-203ENST00000588833 CUX1P39880 1505 aa37.5■■■■□ 3.59
PLEKHF1-203ENST00000588833 SOGA1O94964 1423 aa37.49■■■■□ 3.59
PLEKHF1-203ENST00000588833 TARBP1Q13395 1621 aaKnown RBP37.45■■■■□ 3.59
PLEKHF1-203ENST00000588833 FGD5Q6ZNL6 1462 aa37.44■■■■□ 3.58
PLEKHF1-203ENST00000588833 RAD54L2Q9Y4B4 1467 aa37.4■■■■□ 3.58
PLEKHF1-203ENST00000588833 AQRO60306 1485 aaKnown RBP eCLIP37.36■■■■□ 3.57
PLEKHF1-203ENST00000588833 OSCARQ8IYS5 282 aa37.35■■■■□ 3.57
PLEKHF1-203ENST00000588833 EIF4G3O43432 1585 aaKnown RBP37.34■■■■□ 3.57
PLEKHF1-203ENST00000588833 TDRD9Q8NDG6 1382 aaKnown RBP37.28■■■■□ 3.56
PLEKHF1-203ENST00000588833 WRNQ14191 1432 aaPredicted RBP eCLIP37.27■■■■□ 3.56
PLEKHF1-203ENST00000588833 WDR97A6NE52 1622 aa37.21■■■■□ 3.55
PLEKHF1-203ENST00000588833 TOP2BQ02880 1626 aa37.14■■■■□ 3.54
PLEKHF1-203ENST00000588833 ABCA10Q8WWZ4 1543 aa37.1■■■■□ 3.53
PLEKHF1-203ENST00000588833 BIVM-ERCC5R4GMW8 1640 aa37.09■■■■□ 3.53
PLEKHF1-203ENST00000588833 SYNJ1O43426 1573 aa37.07■■■■□ 3.52
PLEKHF1-203ENST00000588833 GRIN2BQ13224 1484 aa37.05■■■■□ 3.52
PLEKHF1-203ENST00000588833 FBLN2P98095 1184 aa37.04■■■■□ 3.52
PLEKHF1-203ENST00000588833 GAPVD1Q14C86 1478 aa37.01■■■■□ 3.52
PLEKHF1-203ENST00000588833 SNAPC4Q5SXM2 1469 aa36.97■■■■□ 3.51
PLEKHF1-203ENST00000588833 MAGI1Q96QZ7 1491 aaPredicted RBP36.96■■■■□ 3.51
PLEKHF1-203ENST00000588833 CHMP7Q8WUX9 453 aaPredicted RBP36.93■■■■□ 3.5
PLEKHF1-203ENST00000588833 ABCA5Q8WWZ7 1642 aa36.88■■■■□ 3.49
PLEKHF1-203ENST00000588833 CHD1O14646 1710 aa36.85■■■■□ 3.49
PLEKHF1-203ENST00000588833 SYNJ2O15056 1496 aa36.82■■■■□ 3.49
PLEKHF1-203ENST00000588833 PBRM1Q86U86 1689 aa36.79■■■■□ 3.48
PLEKHF1-203ENST00000588833 RIMBP3CA6NJZ7 1639 aa36.74■■■■□ 3.47
PLEKHF1-203ENST00000588833 RIMBP3BA6NNM3 1639 aa36.74■■■■□ 3.47
PLEKHF1-203ENST00000588833 RIMBP3Q9UFD9 1639 aa36.74■■■■□ 3.47
PLEKHF1-203ENST00000588833 ERICH3Q5RHP9 1530 aa36.64■■■■□ 3.46
PLEKHF1-203ENST00000588833 FHAD1B1AJZ9 1412 aa36.6■■■■□ 3.45
PLEKHF1-203ENST00000588833 ARHGEF11O15085 1522 aa36.59■■■■□ 3.45
PLEKHF1-203ENST00000588833 ADAMTS12P58397 1594 aa36.55■■■■□ 3.44
PLEKHF1-203ENST00000588833 KIF27Q86VH2 1401 aa36.55■■■■□ 3.44
PLEKHF1-203ENST00000588833 GRIN2AQ12879 1464 aa36.54■■■■□ 3.44
PLEKHF1-203ENST00000588833 CLASP1Q7Z460 1538 aa36.53■■■■□ 3.44
PLEKHF1-203ENST00000588833 IGF1RP08069 1367 aa36.41■■■■□ 3.42
PLEKHF1-203ENST00000588833 CYB5RLQ6IPT4 315 aa36.39■■■■□ 3.42
PLEKHF1-203ENST00000588833 NUP160Q12769 1436 aa36.39■■■■□ 3.42
PLEKHF1-203ENST00000588833 CEP170Q5SW79 1584 aa36.3■■■■□ 3.4
PLEKHF1-203ENST00000588833 ARAP1Q96P48 1450 aa36.27■■■■□ 3.4
PLEKHF1-203ENST00000588833 CUL7Q14999 1698 aa36.23■■■■□ 3.39
PLEKHF1-203ENST00000588833 CARMIL1Q5VZK9 1371 aa36.2■■■■□ 3.39
PLEKHF1-203ENST00000588833 TRHP20396 242 aaPredicted RBP36.15■■■■□ 3.38
PLEKHF1-203ENST00000588833 JPH4Q96JJ6 628 aa36.12■■■■□ 3.37
PLEKHF1-203ENST00000588833 SHROOM2Q13796 1616 aa36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms