RNA–Protein interactions for RNA: ENST00000588826.2

RAD23A-205, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 832 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-205ENST00000588826 NISCHQ9Y2I1 1504 aa32.94■■■□□ 2.86
RAD23A-205ENST00000588826 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
RAD23A-205ENST00000588826 ABCC9O60706 1549 aa29.52■■■□□ 2.32
RAD23A-205ENST00000588826 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
RAD23A-205ENST00000588826 NACADO15069 1562 aa27.97■■■□□ 2.07
RAD23A-205ENST00000588826 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
RAD23A-205ENST00000588826 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
RAD23A-205ENST00000588826 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
RAD23A-205ENST00000588826 DNAJC5BQ9UF47 199 aa27.56■■■□□ 2
RAD23A-205ENST00000588826 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
RAD23A-205ENST00000588826 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
RAD23A-205ENST00000588826 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
RAD23A-205ENST00000588826 DCAF1Q9Y4B6 1507 aa27.23■■□□□ 1.95
RAD23A-205ENST00000588826 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
RAD23A-205ENST00000588826 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
RAD23A-205ENST00000588826 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
RAD23A-205ENST00000588826 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
RAD23A-205ENST00000588826 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
RAD23A-205ENST00000588826 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
RAD23A-205ENST00000588826 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
RAD23A-205ENST00000588826 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
RAD23A-205ENST00000588826 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
RAD23A-205ENST00000588826 HMGXB3Q12766 1538 aa25.64■■□□□ 1.7
RAD23A-205ENST00000588826 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
RAD23A-205ENST00000588826 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
RAD23A-205ENST00000588826 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
RAD23A-205ENST00000588826 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
RAD23A-205ENST00000588826 CUX2O14529 1486 aa25.47■■□□□ 1.67
RAD23A-205ENST00000588826 MROH2BQ7Z745 1585 aa25.36■■□□□ 1.65
RAD23A-205ENST00000588826 NESP48681 1621 aa25.36■■□□□ 1.65
RAD23A-205ENST00000588826 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
RAD23A-205ENST00000588826 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
RAD23A-205ENST00000588826 THOC2Q8NI27 1593 aaKnown RBP25.17■■□□□ 1.62
RAD23A-205ENST00000588826 KIF21AQ7Z4S6 1674 aa25.14■■□□□ 1.62
RAD23A-205ENST00000588826 WIZO95785 1651 aa25.11■■□□□ 1.61
RAD23A-205ENST00000588826 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
RAD23A-205ENST00000588826 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
RAD23A-205ENST00000588826 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
RAD23A-205ENST00000588826 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
RAD23A-205ENST00000588826 WDR62O43379 1518 aa24.81■■□□□ 1.56
RAD23A-205ENST00000588826 TOP2AP11388 1531 aaKnown RBP24.8■■□□□ 1.56
RAD23A-205ENST00000588826 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
RAD23A-205ENST00000588826 FANCD2Q9BXW9 1451 aa24.72■■□□□ 1.55
RAD23A-205ENST00000588826 CFTRP13569 1480 aa24.71■■□□□ 1.55
RAD23A-205ENST00000588826 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
RAD23A-205ENST00000588826 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
RAD23A-205ENST00000588826 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.51
RAD23A-205ENST00000588826 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
RAD23A-205ENST00000588826 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
RAD23A-205ENST00000588826 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
RAD23A-205ENST00000588826 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
RAD23A-205ENST00000588826 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
RAD23A-205ENST00000588826 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
RAD23A-205ENST00000588826 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
RAD23A-205ENST00000588826 EIF4G3O43432 1585 aaKnown RBP24.15■■□□□ 1.46
RAD23A-205ENST00000588826 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
RAD23A-205ENST00000588826 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
RAD23A-205ENST00000588826 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
RAD23A-205ENST00000588826 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
RAD23A-205ENST00000588826 POLA1P09884 1462 aaPredicted RBP24.01■■□□□ 1.43
RAD23A-205ENST00000588826 CHD1O14646 1710 aa23.99■■□□□ 1.43
RAD23A-205ENST00000588826 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.437e-7■■■■■ 32.9
RAD23A-205ENST00000588826 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
RAD23A-205ENST00000588826 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
RAD23A-205ENST00000588826 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
RAD23A-205ENST00000588826 SOGA1O94964 1423 aa23.88■■□□□ 1.41
RAD23A-205ENST00000588826 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
RAD23A-205ENST00000588826 CUX1P39880 1505 aa23.84■■□□□ 1.41
RAD23A-205ENST00000588826 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
RAD23A-205ENST00000588826 FBLN2P98095 1184 aa23.81■■□□□ 1.4
RAD23A-205ENST00000588826 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
RAD23A-205ENST00000588826 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
RAD23A-205ENST00000588826 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
RAD23A-205ENST00000588826 PBRM1Q86U86 1689 aa23.71■■□□□ 1.39
RAD23A-205ENST00000588826 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
RAD23A-205ENST00000588826 SYNJ1O43426 1573 aa23.68■■□□□ 1.38
RAD23A-205ENST00000588826 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
RAD23A-205ENST00000588826 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
RAD23A-205ENST00000588826 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.38
RAD23A-205ENST00000588826 CHMP7Q8WUX9 453 aaPredicted RBP23.64■■□□□ 1.37
RAD23A-205ENST00000588826 SYNJ2O15056 1496 aa23.63■■□□□ 1.37
RAD23A-205ENST00000588826 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
RAD23A-205ENST00000588826 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
RAD23A-205ENST00000588826 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
RAD23A-205ENST00000588826 BIVM-ERCC5R4GMW8 1640 aa23.54■■□□□ 1.36
RAD23A-205ENST00000588826 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
RAD23A-205ENST00000588826 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
RAD23A-205ENST00000588826 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
RAD23A-205ENST00000588826 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
RAD23A-205ENST00000588826 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
RAD23A-205ENST00000588826 CEP170Q5SW79 1584 aa23.33■■□□□ 1.33
RAD23A-205ENST00000588826 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
RAD23A-205ENST00000588826 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
RAD23A-205ENST00000588826 NUP160Q12769 1436 aa23.3■■□□□ 1.32
RAD23A-205ENST00000588826 ERCC6L2Q5T890 1561 aa23.25■■□□□ 1.31
RAD23A-205ENST00000588826 SHROOM2Q13796 1616 aa23.25■■□□□ 1.31
RAD23A-205ENST00000588826 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
RAD23A-205ENST00000588826 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
RAD23A-205ENST00000588826 CUL7Q14999 1698 aa23.05■■□□□ 1.28
RAD23A-205ENST00000588826 KIF27Q86VH2 1401 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms