RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 NISCHQ9Y2I1 1504 aa35.52■■■■□ 3.28
CACTIN-206ENST00000588749 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
CACTIN-206ENST00000588749 ABCC9O60706 1549 aa31.19■■■□□ 2.58
CACTIN-206ENST00000588749 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
CACTIN-206ENST00000588749 NACADO15069 1562 aa29.81■■■□□ 2.36
CACTIN-206ENST00000588749 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
CACTIN-206ENST00000588749 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
CACTIN-206ENST00000588749 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
CACTIN-206ENST00000588749 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
CACTIN-206ENST00000588749 UNC13AQ9UPW8 1703 aa29.25■■■□□ 2.27
CACTIN-206ENST00000588749 PABPN1Q86U42 306 aaKnown RBP eCLIP29.09■■■□□ 2.25
CACTIN-206ENST00000588749 BICRAQ9NZM4 1560 aa29■■■□□ 2.23
CACTIN-206ENST00000588749 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
CACTIN-206ENST00000588749 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
CACTIN-206ENST00000588749 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
CACTIN-206ENST00000588749 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
CACTIN-206ENST00000588749 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
CACTIN-206ENST00000588749 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
CACTIN-206ENST00000588749 SMARCA4P51532 1647 aa27.62■■■□□ 2.01
CACTIN-206ENST00000588749 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
CACTIN-206ENST00000588749 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
CACTIN-206ENST00000588749 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
CACTIN-206ENST00000588749 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
CACTIN-206ENST00000588749 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.97
CACTIN-206ENST00000588749 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
CACTIN-206ENST00000588749 PEG3Q9GZU2 1588 aa27.32■■□□□ 1.96
CACTIN-206ENST00000588749 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
CACTIN-206ENST00000588749 WIZO95785 1651 aa27.1■■□□□ 1.93
CACTIN-206ENST00000588749 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
CACTIN-206ENST00000588749 NESP48681 1621 aa26.93■■□□□ 1.9
CACTIN-206ENST00000588749 ERCC6Q03468 1493 aa26.89■■□□□ 1.9
CACTIN-206ENST00000588749 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
CACTIN-206ENST00000588749 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
CACTIN-206ENST00000588749 CADPSQ9ULU8 1353 aa26.68■■□□□ 1.86
CACTIN-206ENST00000588749 CUX2O14529 1486 aa26.64■■□□□ 1.86
CACTIN-206ENST00000588749 PDS5BQ9NTI5 1447 aa26.63■■□□□ 1.85
CACTIN-206ENST00000588749 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
CACTIN-206ENST00000588749 THOC2Q8NI27 1593 aaKnown RBP26.56■■□□□ 1.84
CACTIN-206ENST00000588749 CFTRP13569 1480 aa26.49■■□□□ 1.83
CACTIN-206ENST00000588749 CCDC88BA6NC98 1476 aa26.46■■□□□ 1.83
CACTIN-206ENST00000588749 FANCD2Q9BXW9 1451 aa26.4■■□□□ 1.82
CACTIN-206ENST00000588749 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.82
CACTIN-206ENST00000588749 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
CACTIN-206ENST00000588749 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
CACTIN-206ENST00000588749 WDR62O43379 1518 aa26.3■■□□□ 1.8
CACTIN-206ENST00000588749 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
CACTIN-206ENST00000588749 URB2Q14146 1524 aaKnown RBP26.15■■□□□ 1.78
CACTIN-206ENST00000588749 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
CACTIN-206ENST00000588749 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
CACTIN-206ENST00000588749 DNMBPQ6XZF7 1577 aa25.92■■□□□ 1.74
CACTIN-206ENST00000588749 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
CACTIN-206ENST00000588749 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
CACTIN-206ENST00000588749 ZNF608Q9ULD9 1512 aaPredicted RBP25.75■■□□□ 1.71
CACTIN-206ENST00000588749 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
CACTIN-206ENST00000588749 CUX1P39880 1505 aa25.7■■□□□ 1.7
CACTIN-206ENST00000588749 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
CACTIN-206ENST00000588749 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
CACTIN-206ENST00000588749 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
CACTIN-206ENST00000588749 RAD54L2Q9Y4B4 1467 aa25.63■■□□□ 1.69
CACTIN-206ENST00000588749 SOGA1O94964 1423 aa25.61■■□□□ 1.69
CACTIN-206ENST00000588749 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.684e-6■■□□□ 14
CACTIN-206ENST00000588749 TDRD9Q8NDG6 1382 aaKnown RBP25.5■■□□□ 1.67
CACTIN-206ENST00000588749 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
CACTIN-206ENST00000588749 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.671e-6■■■■■ 58.5
CACTIN-206ENST00000588749 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
CACTIN-206ENST00000588749 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
CACTIN-206ENST00000588749 BIVM-ERCC5R4GMW8 1640 aa25.44■■□□□ 1.66
CACTIN-206ENST00000588749 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
CACTIN-206ENST00000588749 CHD1O14646 1710 aa25.38■■□□□ 1.65
CACTIN-206ENST00000588749 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
CACTIN-206ENST00000588749 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
CACTIN-206ENST00000588749 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
CACTIN-206ENST00000588749 GAPVD1Q14C86 1478 aa25.32■■□□□ 1.64
CACTIN-206ENST00000588749 ABCA5Q8WWZ7 1642 aa25.31■■□□□ 1.64
CACTIN-206ENST00000588749 FBLN2P98095 1184 aa25.31■■□□□ 1.64
CACTIN-206ENST00000588749 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
CACTIN-206ENST00000588749 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
CACTIN-206ENST00000588749 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
CACTIN-206ENST00000588749 CHMP7Q8WUX9 453 aaPredicted RBP25.19■■□□□ 1.62
CACTIN-206ENST00000588749 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
CACTIN-206ENST00000588749 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
CACTIN-206ENST00000588749 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
CACTIN-206ENST00000588749 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
CACTIN-206ENST00000588749 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
CACTIN-206ENST00000588749 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
CACTIN-206ENST00000588749 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
CACTIN-206ENST00000588749 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
CACTIN-206ENST00000588749 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
CACTIN-206ENST00000588749 FHAD1B1AJZ9 1412 aa25.01■■□□□ 1.59
CACTIN-206ENST00000588749 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
CACTIN-206ENST00000588749 CEP170Q5SW79 1584 aa24.92■■□□□ 1.58
CACTIN-206ENST00000588749 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
CACTIN-206ENST00000588749 NUP160Q12769 1436 aa24.9■■□□□ 1.58
CACTIN-206ENST00000588749 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
CACTIN-206ENST00000588749 IGF1RP08069 1367 aa24.84■■□□□ 1.57
CACTIN-206ENST00000588749 CUL7Q14999 1698 aa24.82■■□□□ 1.56
CACTIN-206ENST00000588749 SHROOM2Q13796 1616 aa24.75■■□□□ 1.55
CACTIN-206ENST00000588749 ERCC6L2Q5T890 1561 aa24.73■■□□□ 1.55
CACTIN-206ENST00000588749 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
CACTIN-206ENST00000588749 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms