RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 NISCHQ9Y2I1 1504 aa44.71■■■■■ 4.75
HDAC5-209ENST00000588703 CCDC180Q9P1Z9 1646 aa39.98■■■■□ 3.99
HDAC5-209ENST00000588703 ABCC9O60706 1549 aa39.45■■■■□ 3.91
HDAC5-209ENST00000588703 RB1CC1Q8TDY2 1594 aa37.77■■■■□ 3.64
HDAC5-209ENST00000588703 NACADO15069 1562 aa37.63■■■■□ 3.61
HDAC5-209ENST00000588703 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
HDAC5-209ENST00000588703 MYO15BQ96JP2 1530 aa37.26■■■■□ 3.56
HDAC5-209ENST00000588703 ZCCHC6Q5VYS8 1495 aaKnown RBP37.18■■■■□ 3.54
HDAC5-209ENST00000588703 UNC13AQ9UPW8 1703 aa37.05■■■■□ 3.52
HDAC5-209ENST00000588703 DCAF1Q9Y4B6 1507 aa36.97■■■■□ 3.51
HDAC5-209ENST00000588703 PABPN1Q86U42 306 aaKnown RBP eCLIP36.75■■■■□ 3.47
HDAC5-209ENST00000588703 BICRAQ9NZM4 1560 aa36.71■■■■□ 3.47
HDAC5-209ENST00000588703 DNAJC5BQ9UF47 199 aa36.58■■■■□ 3.45
HDAC5-209ENST00000588703 SCRIBQ14160 1630 aa36.43■■■■□ 3.42
HDAC5-209ENST00000588703 SHROOM4Q9ULL8 1493 aa36.21■■■■□ 3.39
HDAC5-209ENST00000588703 EIF4G1Q04637 1599 aaKnown RBP35.73■■■■□ 3.31
HDAC5-209ENST00000588703 CC2D2AQ9P2K1 1620 aa35.7■■■■□ 3.31
HDAC5-209ENST00000588703 CECR2Q9BXF3 1484 aa35.48■■■■□ 3.27
HDAC5-209ENST00000588703 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
HDAC5-209ENST00000588703 NCAPD3P42695 1498 aa34.71■■■■□ 3.15
HDAC5-209ENST00000588703 ATAD2BQ9ULI0 1458 aa34.69■■■■□ 3.14
HDAC5-209ENST00000588703 BAZ1AQ9NRL2 1556 aaPredicted RBP34.67■■■■□ 3.14
HDAC5-209ENST00000588703 SMARCA2P51531 1590 aa34.61■■■■□ 3.13
HDAC5-209ENST00000588703 HMGXB3Q12766 1538 aa34.54■■■■□ 3.12
HDAC5-209ENST00000588703 MROH2BQ7Z745 1585 aa34.47■■■■□ 3.11
HDAC5-209ENST00000588703 PEG3Q9GZU2 1588 aa34.47■■■■□ 3.11
HDAC5-209ENST00000588703 BAZ1BQ9UIG0 1483 aaKnown RBP34.36■■■■□ 3.09
HDAC5-209ENST00000588703 WIZO95785 1651 aa34.11■■■■□ 3.05
HDAC5-209ENST00000588703 NESP48681 1621 aa34.05■■■■□ 3.04
HDAC5-209ENST00000588703 ERCC6Q03468 1493 aa33.99■■■■□ 3.03
HDAC5-209ENST00000588703 RSF1Q96T23 1441 aaPredicted RBP33.89■■■■□ 3.02
HDAC5-209ENST00000588703 LAMC3Q9Y6N6 1575 aa33.88■■■■□ 3.01
HDAC5-209ENST00000588703 CUX2O14529 1486 aa33.8■■■■□ 3
HDAC5-209ENST00000588703 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
HDAC5-209ENST00000588703 KIF21AQ7Z4S6 1674 aa33.68■■■□□ 2.98
HDAC5-209ENST00000588703 THOC2Q8NI27 1593 aaKnown RBP33.66■■■□□ 2.98
HDAC5-209ENST00000588703 CADPSQ9ULU8 1353 aa33.65■■■□□ 2.98
HDAC5-209ENST00000588703 PDS5BQ9NTI5 1447 aa33.61■■■□□ 2.97
HDAC5-209ENST00000588703 CFTRP13569 1480 aa33.4■■■□□ 2.94
HDAC5-209ENST00000588703 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
HDAC5-209ENST00000588703 FANCD2Q9BXW9 1451 aa33.3■■■□□ 2.92
HDAC5-209ENST00000588703 CEP164Q9UPV0 1460 aa33.29■■■□□ 2.92
HDAC5-209ENST00000588703 CCDC88BA6NC98 1476 aa33.28■■■□□ 2.92
HDAC5-209ENST00000588703 WDR62O43379 1518 aa33.27■■■□□ 2.92
HDAC5-209ENST00000588703 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
HDAC5-209ENST00000588703 DNAJC5Q9H3Z4 198 aa33.2■■■□□ 2.91
HDAC5-209ENST00000588703 URB2Q14146 1524 aaKnown RBP33.02■■■□□ 2.88
HDAC5-209ENST00000588703 TOPBP1Q92547 1522 aa32.74■■■□□ 2.83
HDAC5-209ENST00000588703 DNMBPQ6XZF7 1577 aa32.67■■■□□ 2.82
HDAC5-209ENST00000588703 SUPT5HO00267 1087 aaKnown RBP32.66■■■□□ 2.82
HDAC5-209ENST00000588703 ABCC8Q09428 1581 aa32.65■■■□□ 2.82
HDAC5-209ENST00000588703 IFT140Q96RY7 1462 aa32.6■■■□□ 2.81
HDAC5-209ENST00000588703 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
HDAC5-209ENST00000588703 TARBP1Q13395 1621 aaKnown RBP32.46■■■□□ 2.79
HDAC5-209ENST00000588703 POLA1P09884 1462 aaPredicted RBP32.43■■■□□ 2.78
HDAC5-209ENST00000588703 EIF4G3O43432 1585 aaKnown RBP32.41■■■□□ 2.78
HDAC5-209ENST00000588703 CUX1P39880 1505 aa32.37■■■□□ 2.77
HDAC5-209ENST00000588703 FGD5Q6ZNL6 1462 aa32.29■■■□□ 2.76
HDAC5-209ENST00000588703 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
HDAC5-209ENST00000588703 AQRO60306 1485 aaKnown RBP eCLIP32.27■■■□□ 2.761e-12■■■■■ 49.3
HDAC5-209ENST00000588703 OSCARQ8IYS5 282 aa32.25■■■□□ 2.75
HDAC5-209ENST00000588703 SOGA1O94964 1423 aa32.25■■■□□ 2.75
HDAC5-209ENST00000588703 WDR97A6NE52 1622 aa32.13■■■□□ 2.73
HDAC5-209ENST00000588703 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
HDAC5-209ENST00000588703 CHD1O14646 1710 aa32.12■■■□□ 2.73
HDAC5-209ENST00000588703 BIVM-ERCC5R4GMW8 1640 aa32■■■□□ 2.71
HDAC5-209ENST00000588703 TOP2BQ02880 1626 aa31.98■■■□□ 2.71
HDAC5-209ENST00000588703 SYNJ1O43426 1573 aa31.98■■■□□ 2.71
HDAC5-209ENST00000588703 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
HDAC5-209ENST00000588703 ABCA10Q8WWZ4 1543 aa31.96■■■□□ 2.71
HDAC5-209ENST00000588703 WRNQ14191 1432 aaPredicted RBP eCLIP31.95■■■□□ 2.71
HDAC5-209ENST00000588703 PBRM1Q86U86 1689 aa31.94■■■□□ 2.7
HDAC5-209ENST00000588703 GRIN2BQ13224 1484 aa31.93■■■□□ 2.7
HDAC5-209ENST00000588703 ABCA5Q8WWZ7 1642 aa31.92■■■□□ 2.7
HDAC5-209ENST00000588703 RIMBP3CA6NJZ7 1639 aa31.91■■■□□ 2.7
HDAC5-209ENST00000588703 RIMBP3BA6NNM3 1639 aa31.91■■■□□ 2.7
HDAC5-209ENST00000588703 RIMBP3Q9UFD9 1639 aa31.91■■■□□ 2.7
HDAC5-209ENST00000588703 TRIM41Q8WV44 630 aa31.91■■■□□ 2.7
HDAC5-209ENST00000588703 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
HDAC5-209ENST00000588703 GAPVD1Q14C86 1478 aa31.89■■■□□ 2.7
HDAC5-209ENST00000588703 FBLN2P98095 1184 aa31.88■■■□□ 2.69
HDAC5-209ENST00000588703 ARHGEF11O15085 1522 aa31.84■■■□□ 2.69
HDAC5-209ENST00000588703 SYNJ2O15056 1496 aa31.78■■■□□ 2.68
HDAC5-209ENST00000588703 CLASP1Q7Z460 1538 aa31.73■■■□□ 2.67
HDAC5-209ENST00000588703 CHMP7Q8WUX9 453 aaPredicted RBP31.72■■■□□ 2.67
HDAC5-209ENST00000588703 ADAMTS12P58397 1594 aa31.64■■■□□ 2.65
HDAC5-209ENST00000588703 ERICH3Q5RHP9 1530 aa31.57■■■□□ 2.64
HDAC5-209ENST00000588703 ARAP1Q96P48 1450 aa31.57■■■□□ 2.64
HDAC5-209ENST00000588703 GRIN2AQ12879 1464 aa31.54■■■□□ 2.64
HDAC5-209ENST00000588703 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
HDAC5-209ENST00000588703 CYB5RLQ6IPT4 315 aa31.48■■■□□ 2.63
HDAC5-209ENST00000588703 CEP170Q5SW79 1584 aa31.45■■■□□ 2.63
HDAC5-209ENST00000588703 NUP160Q12769 1436 aa31.42■■■□□ 2.62
HDAC5-209ENST00000588703 KIF27Q86VH2 1401 aa31.29■■■□□ 2.6
HDAC5-209ENST00000588703 SHROOM2Q13796 1616 aa31.28■■■□□ 2.6
HDAC5-209ENST00000588703 ERCC6L2Q5T890 1561 aa31.27■■■□□ 2.6
HDAC5-209ENST00000588703 IGF1RP08069 1367 aa31.24■■■□□ 2.59
HDAC5-209ENST00000588703 CUL7Q14999 1698 aa31.22■■■□□ 2.59
HDAC5-209ENST00000588703 RUSC2Q8N2Y8 1516 aa31.18■■■□□ 2.58
HDAC5-209ENST00000588703 PRG4Q92954 1404 aaPredicted RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms