RNA–Protein interactions for RNA: ENST00000588606.5

SMIM22-204, Transcript of small integral membrane protein 22, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMIM22, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-204ENST00000588606 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
SMIM22-204ENST00000588606 ABCC9O60706 1549 aa25.45■■□□□ 1.66
SMIM22-204ENST00000588606 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
SMIM22-204ENST00000588606 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
SMIM22-204ENST00000588606 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
SMIM22-204ENST00000588606 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
SMIM22-204ENST00000588606 NACADO15069 1562 aa23.72■■□□□ 1.39
SMIM22-204ENST00000588606 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
SMIM22-204ENST00000588606 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
SMIM22-204ENST00000588606 BICRAQ9NZM4 1560 aa23.37■■□□□ 1.33
SMIM22-204ENST00000588606 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
SMIM22-204ENST00000588606 CC2D2AQ9P2K1 1620 aa23.03■■□□□ 1.28
SMIM22-204ENST00000588606 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
SMIM22-204ENST00000588606 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
SMIM22-204ENST00000588606 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
SMIM22-204ENST00000588606 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
SMIM22-204ENST00000588606 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
SMIM22-204ENST00000588606 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
SMIM22-204ENST00000588606 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
SMIM22-204ENST00000588606 CUX2O14529 1486 aa22.06■■□□□ 1.12
SMIM22-204ENST00000588606 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
SMIM22-204ENST00000588606 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
SMIM22-204ENST00000588606 NESP48681 1621 aa21.74■■□□□ 1.07
SMIM22-204ENST00000588606 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
SMIM22-204ENST00000588606 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
SMIM22-204ENST00000588606 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
SMIM22-204ENST00000588606 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
SMIM22-204ENST00000588606 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
SMIM22-204ENST00000588606 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
SMIM22-204ENST00000588606 BAZ1BQ9UIG0 1483 aaKnown RBP21.56■■□□□ 1.04
SMIM22-204ENST00000588606 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
SMIM22-204ENST00000588606 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
SMIM22-204ENST00000588606 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
SMIM22-204ENST00000588606 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
SMIM22-204ENST00000588606 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
SMIM22-204ENST00000588606 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
SMIM22-204ENST00000588606 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
SMIM22-204ENST00000588606 WDR62O43379 1518 aa21.22■□□□□ 0.99
SMIM22-204ENST00000588606 WIZO95785 1651 aa21.15■□□□□ 0.98
SMIM22-204ENST00000588606 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
SMIM22-204ENST00000588606 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
SMIM22-204ENST00000588606 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
SMIM22-204ENST00000588606 FANCD2Q9BXW9 1451 aa20.96■□□□□ 0.95
SMIM22-204ENST00000588606 RIMBP3CA6NJZ7 1639 aa20.91■□□□□ 0.94
SMIM22-204ENST00000588606 RIMBP3BA6NNM3 1639 aa20.91■□□□□ 0.94
SMIM22-204ENST00000588606 RIMBP3Q9UFD9 1639 aa20.91■□□□□ 0.94
SMIM22-204ENST00000588606 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
SMIM22-204ENST00000588606 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
SMIM22-204ENST00000588606 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
SMIM22-204ENST00000588606 CFTRP13569 1480 aa20.81■□□□□ 0.92
SMIM22-204ENST00000588606 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
SMIM22-204ENST00000588606 CHD1O14646 1710 aa20.71■□□□□ 0.91
SMIM22-204ENST00000588606 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
SMIM22-204ENST00000588606 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
SMIM22-204ENST00000588606 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
SMIM22-204ENST00000588606 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
SMIM22-204ENST00000588606 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
SMIM22-204ENST00000588606 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
SMIM22-204ENST00000588606 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
SMIM22-204ENST00000588606 TARBP1Q13395 1621 aaKnown RBP20.46■□□□□ 0.87
SMIM22-204ENST00000588606 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
SMIM22-204ENST00000588606 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
SMIM22-204ENST00000588606 TRHP20396 242 aaPredicted RBP20.41■□□□□ 0.86
SMIM22-204ENST00000588606 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
SMIM22-204ENST00000588606 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMIM22-204ENST00000588606 FBLN2P98095 1184 aa20.31■□□□□ 0.84
SMIM22-204ENST00000588606 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
SMIM22-204ENST00000588606 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
SMIM22-204ENST00000588606 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
SMIM22-204ENST00000588606 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
SMIM22-204ENST00000588606 SNAPC4Q5SXM2 1469 aa20.22■□□□□ 0.83
SMIM22-204ENST00000588606 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
SMIM22-204ENST00000588606 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
SMIM22-204ENST00000588606 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
SMIM22-204ENST00000588606 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.81
SMIM22-204ENST00000588606 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
SMIM22-204ENST00000588606 FGD5Q6ZNL6 1462 aa20.13■□□□□ 0.81
SMIM22-204ENST00000588606 SOGA1O94964 1423 aa20.11■□□□□ 0.81
SMIM22-204ENST00000588606 MAGI1Q96QZ7 1491 aaPredicted RBP20.1■□□□□ 0.81
SMIM22-204ENST00000588606 CUX1P39880 1505 aa20.04■□□□□ 0.8
SMIM22-204ENST00000588606 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
SMIM22-204ENST00000588606 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
SMIM22-204ENST00000588606 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
SMIM22-204ENST00000588606 GAPVD1Q14C86 1478 aa20.01■□□□□ 0.79
SMIM22-204ENST00000588606 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
SMIM22-204ENST00000588606 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
SMIM22-204ENST00000588606 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
SMIM22-204ENST00000588606 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
SMIM22-204ENST00000588606 CEP170Q5SW79 1584 aa19.85■□□□□ 0.77
SMIM22-204ENST00000588606 GRIN2AQ12879 1464 aa19.82■□□□□ 0.76
SMIM22-204ENST00000588606 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
SMIM22-204ENST00000588606 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
SMIM22-204ENST00000588606 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
SMIM22-204ENST00000588606 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
SMIM22-204ENST00000588606 NUP160Q12769 1436 aa19.7■□□□□ 0.74
SMIM22-204ENST00000588606 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
SMIM22-204ENST00000588606 TSPOAP1O95153 1857 aa19.67■□□□□ 0.74
SMIM22-204ENST00000588606 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
SMIM22-204ENST00000588606 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
SMIM22-204ENST00000588606 DIP2BQ9P265 1576 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms