RNA–Protein interactions for RNA: ENST00000588556.1

PPL-202, Transcript of periplakin, humanhuman

TSL 5

Gene PPL, Length 897 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPL-202ENST00000588556 NISCHQ9Y2I1 1504 aa46.57■■■■■ 5.05
PPL-202ENST00000588556 CCDC180Q9P1Z9 1646 aa41.65■■■■■ 4.26
PPL-202ENST00000588556 ABCC9O60706 1549 aa41.22■■■■■ 4.19
PPL-202ENST00000588556 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.89
PPL-202ENST00000588556 NACADO15069 1562 aa39.21■■■■□ 3.87
PPL-202ENST00000588556 DCAF8L2P0C7V8 631 aa38.94■■■■□ 3.82
PPL-202ENST00000588556 MYO15BQ96JP2 1530 aa38.82■■■■□ 3.8
PPL-202ENST00000588556 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
PPL-202ENST00000588556 ZCCHC6Q5VYS8 1495 aaKnown RBP38.7■■■■□ 3.79
PPL-202ENST00000588556 DCAF1Q9Y4B6 1507 aa38.48■■■■□ 3.75
PPL-202ENST00000588556 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
PPL-202ENST00000588556 DNAJC5BQ9UF47 199 aa38.39■■■■□ 3.74
PPL-202ENST00000588556 BICRAQ9NZM4 1560 aa38.37■■■■□ 3.73
PPL-202ENST00000588556 SCRIBQ14160 1630 aa37.97■■■■□ 3.67
PPL-202ENST00000588556 SHROOM4Q9ULL8 1493 aa37.72■■■■□ 3.63
PPL-202ENST00000588556 EIF4G1Q04637 1599 aaKnown RBP37.31■■■■□ 3.56
PPL-202ENST00000588556 CC2D2AQ9P2K1 1620 aa37.3■■■■□ 3.56
PPL-202ENST00000588556 CECR2Q9BXF3 1484 aa37.06■■■■□ 3.52
PPL-202ENST00000588556 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
PPL-202ENST00000588556 NCAPD3P42695 1498 aa36.2■■■■□ 3.39
PPL-202ENST00000588556 ATAD2BQ9ULI0 1458 aa36.17■■■■□ 3.38
PPL-202ENST00000588556 BAZ1AQ9NRL2 1556 aaPredicted RBP36.08■■■■□ 3.37
PPL-202ENST00000588556 SMARCA2P51531 1590 aa36.05■■■■□ 3.36
PPL-202ENST00000588556 HMGXB3Q12766 1538 aa35.99■■■■□ 3.35
PPL-202ENST00000588556 MROH2BQ7Z745 1585 aa35.93■■■■□ 3.34
PPL-202ENST00000588556 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
PPL-202ENST00000588556 BAZ1BQ9UIG0 1483 aaKnown RBP35.79■■■■□ 3.32
PPL-202ENST00000588556 NESP48681 1621 aa35.58■■■■□ 3.29
PPL-202ENST00000588556 WIZO95785 1651 aa35.54■■■■□ 3.28
PPL-202ENST00000588556 ERCC6Q03468 1493 aa35.46■■■■□ 3.27
PPL-202ENST00000588556 LAMC3Q9Y6N6 1575 aa35.33■■■■□ 3.25
PPL-202ENST00000588556 CUX2O14529 1486 aa35.32■■■■□ 3.24
PPL-202ENST00000588556 RSF1Q96T23 1441 aaPredicted RBP35.28■■■■□ 3.24
PPL-202ENST00000588556 KIF21AQ7Z4S6 1674 aa35.18■■■■□ 3.22
PPL-202ENST00000588556 THOC2Q8NI27 1593 aaKnown RBP35.18■■■■□ 3.22
PPL-202ENST00000588556 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
PPL-202ENST00000588556 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
PPL-202ENST00000588556 PDS5BQ9NTI5 1447 aa35.02■■■■□ 3.2
PPL-202ENST00000588556 DNAJC5Q9H3Z4 198 aa34.84■■■■□ 3.17
PPL-202ENST00000588556 CFTRP13569 1480 aa34.81■■■■□ 3.16
PPL-202ENST00000588556 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
PPL-202ENST00000588556 WDR62O43379 1518 aa34.73■■■■□ 3.15
PPL-202ENST00000588556 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
PPL-202ENST00000588556 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
PPL-202ENST00000588556 CCDC88BA6NC98 1476 aa34.65■■■■□ 3.14
PPL-202ENST00000588556 PRDM2Q13029 1718 aa34.61■■■■□ 3.13
PPL-202ENST00000588556 URB2Q14146 1524 aaKnown RBP34.47■■■■□ 3.11
PPL-202ENST00000588556 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
PPL-202ENST00000588556 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
PPL-202ENST00000588556 ZNF608Q9ULD9 1512 aaPredicted RBP33.98■■■■□ 3.03
PPL-202ENST00000588556 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
PPL-202ENST00000588556 IFT140Q96RY7 1462 aa33.97■■■■□ 3.03
PPL-202ENST00000588556 SUPT5HO00267 1087 aaKnown RBP33.88■■■■□ 3.01
PPL-202ENST00000588556 TARBP1Q13395 1621 aaKnown RBP33.87■■■■□ 3.01
PPL-202ENST00000588556 EIF4G3O43432 1585 aaKnown RBP33.82■■■■□ 3
PPL-202ENST00000588556 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3
PPL-202ENST00000588556 CUX1P39880 1505 aa33.74■■■□□ 2.99
PPL-202ENST00000588556 RAD54L2Q9Y4B4 1467 aa33.69■■■□□ 2.98
PPL-202ENST00000588556 OSCARQ8IYS5 282 aa33.68■■■□□ 2.98
PPL-202ENST00000588556 AQRO60306 1485 aaKnown RBP eCLIP33.67■■■□□ 2.98
PPL-202ENST00000588556 FGD5Q6ZNL6 1462 aa33.64■■■□□ 2.98
PPL-202ENST00000588556 SOGA1O94964 1423 aa33.59■■■□□ 2.97
PPL-202ENST00000588556 CHD1O14646 1710 aa33.53■■■□□ 2.96
PPL-202ENST00000588556 WDR97A6NE52 1622 aa33.51■■■□□ 2.96
PPL-202ENST00000588556 TDRD9Q8NDG6 1382 aaKnown RBP33.5■■■□□ 2.95
PPL-202ENST00000588556 TRIM41Q8WV44 630 aa33.42■■■□□ 2.94
PPL-202ENST00000588556 RIMBP3CA6NJZ7 1639 aa33.39■■■□□ 2.93
PPL-202ENST00000588556 RIMBP3BA6NNM3 1639 aa33.39■■■□□ 2.93
PPL-202ENST00000588556 RIMBP3Q9UFD9 1639 aa33.39■■■□□ 2.93
PPL-202ENST00000588556 SNAPC4Q5SXM2 1469 aa33.34■■■□□ 2.93
PPL-202ENST00000588556 BIVM-ERCC5R4GMW8 1640 aa33.31■■■□□ 2.92
PPL-202ENST00000588556 SYNJ1O43426 1573 aa33.29■■■□□ 2.92
PPL-202ENST00000588556 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
PPL-202ENST00000588556 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
PPL-202ENST00000588556 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
PPL-202ENST00000588556 TOP2BQ02880 1626 aa33.27■■■□□ 2.92
PPL-202ENST00000588556 ABCA5Q8WWZ7 1642 aa33.27■■■□□ 2.92
PPL-202ENST00000588556 GRIN2BQ13224 1484 aa33.26■■■□□ 2.92
PPL-202ENST00000588556 MAGI1Q96QZ7 1491 aaPredicted RBP33.24■■■□□ 2.91
PPL-202ENST00000588556 FBLN2P98095 1184 aa33.23■■■□□ 2.91
PPL-202ENST00000588556 WRNQ14191 1432 aaPredicted RBP eCLIP33.21■■■□□ 2.91
PPL-202ENST00000588556 GAPVD1Q14C86 1478 aa33.21■■■□□ 2.91
PPL-202ENST00000588556 CLASP1Q7Z460 1538 aa33.13■■■□□ 2.89
PPL-202ENST00000588556 SYNJ2O15056 1496 aa33.12■■■□□ 2.89
PPL-202ENST00000588556 CHMP7Q8WUX9 453 aaPredicted RBP33.05■■■□□ 2.88
PPL-202ENST00000588556 ARAP1Q96P48 1450 aa33.01■■■□□ 2.88
PPL-202ENST00000588556 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
PPL-202ENST00000588556 CYB5RLQ6IPT4 315 aa32.9■■■□□ 2.86
PPL-202ENST00000588556 GRIN2AQ12879 1464 aa32.88■■■□□ 2.85
PPL-202ENST00000588556 ERICH3Q5RHP9 1530 aa32.85■■■□□ 2.85
PPL-202ENST00000588556 CEP170Q5SW79 1584 aa32.81■■■□□ 2.84
PPL-202ENST00000588556 FHAD1B1AJZ9 1412 aa32.78■■■□□ 2.84
PPL-202ENST00000588556 NUP160Q12769 1436 aa32.77■■■□□ 2.84
PPL-202ENST00000588556 ERCC6L2Q5T890 1561 aa32.69■■■□□ 2.82
PPL-202ENST00000588556 SHROOM2Q13796 1616 aa32.65■■■□□ 2.82
PPL-202ENST00000588556 IGF1RP08069 1367 aa32.52■■■□□ 2.8
PPL-202ENST00000588556 KIF27Q86VH2 1401 aa32.51■■■□□ 2.8
PPL-202ENST00000588556 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.79
PPL-202ENST00000588556 CUL7Q14999 1698 aa32.46■■■□□ 2.79
PPL-202ENST00000588556 PRG4Q92954 1404 aaPredicted RBP32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms