RNA–Protein interactions for RNA: ENST00000588551.5

POP4-208, Transcript of POP4 homolog, ribonuclease P/MRP subunit, humanhuman

TSL 3

Gene POP4, Length 789 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POP4-208ENST00000588551 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
POP4-208ENST00000588551 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
POP4-208ENST00000588551 ABCC9O60706 1549 aa29.05■■■□□ 2.24
POP4-208ENST00000588551 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
POP4-208ENST00000588551 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
POP4-208ENST00000588551 NACADO15069 1562 aa27.82■■■□□ 2.04
POP4-208ENST00000588551 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
POP4-208ENST00000588551 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
POP4-208ENST00000588551 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
POP4-208ENST00000588551 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
POP4-208ENST00000588551 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
POP4-208ENST00000588551 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
POP4-208ENST00000588551 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
POP4-208ENST00000588551 SCRIBQ14160 1630 aa27■■□□□ 1.91
POP4-208ENST00000588551 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
POP4-208ENST00000588551 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
POP4-208ENST00000588551 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
POP4-208ENST00000588551 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
POP4-208ENST00000588551 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
POP4-208ENST00000588551 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
POP4-208ENST00000588551 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
POP4-208ENST00000588551 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
POP4-208ENST00000588551 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
POP4-208ENST00000588551 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
POP4-208ENST00000588551 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
POP4-208ENST00000588551 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
POP4-208ENST00000588551 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
POP4-208ENST00000588551 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
POP4-208ENST00000588551 WIZO95785 1651 aa25.41■■□□□ 1.66
POP4-208ENST00000588551 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
POP4-208ENST00000588551 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
POP4-208ENST00000588551 CUX2O14529 1486 aa25.15■■□□□ 1.62
POP4-208ENST00000588551 NESP48681 1621 aa25.12■■□□□ 1.61
POP4-208ENST00000588551 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
POP4-208ENST00000588551 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
POP4-208ENST00000588551 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
POP4-208ENST00000588551 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
POP4-208ENST00000588551 CFTRP13569 1480 aa24.88■■□□□ 1.57
POP4-208ENST00000588551 PDS5BQ9NTI5 1447 aa24.87■■□□□ 1.57
POP4-208ENST00000588551 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
POP4-208ENST00000588551 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
POP4-208ENST00000588551 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
POP4-208ENST00000588551 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
POP4-208ENST00000588551 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
POP4-208ENST00000588551 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
POP4-208ENST00000588551 WDR62O43379 1518 aa24.51■■□□□ 1.51
POP4-208ENST00000588551 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.51
POP4-208ENST00000588551 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
POP4-208ENST00000588551 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
POP4-208ENST00000588551 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
POP4-208ENST00000588551 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
POP4-208ENST00000588551 CUX1P39880 1505 aa24.15■■□□□ 1.46
POP4-208ENST00000588551 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
POP4-208ENST00000588551 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
POP4-208ENST00000588551 SOGA1O94964 1423 aa24.06■■□□□ 1.44
POP4-208ENST00000588551 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
POP4-208ENST00000588551 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
POP4-208ENST00000588551 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
POP4-208ENST00000588551 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
POP4-208ENST00000588551 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
POP4-208ENST00000588551 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.432e-8■■■■■ 42.3
POP4-208ENST00000588551 OSCARQ8IYS5 282 aa23.96■■□□□ 1.43
POP4-208ENST00000588551 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
POP4-208ENST00000588551 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
POP4-208ENST00000588551 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
POP4-208ENST00000588551 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
POP4-208ENST00000588551 EIF4G3O43432 1585 aaKnown RBP23.83■■□□□ 1.41
POP4-208ENST00000588551 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
POP4-208ENST00000588551 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
POP4-208ENST00000588551 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
POP4-208ENST00000588551 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
POP4-208ENST00000588551 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
POP4-208ENST00000588551 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
POP4-208ENST00000588551 FBLN2P98095 1184 aa23.66■■□□□ 1.38
POP4-208ENST00000588551 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
POP4-208ENST00000588551 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
POP4-208ENST00000588551 CHD1O14646 1710 aa23.62■■□□□ 1.37
POP4-208ENST00000588551 CHMP7Q8WUX9 453 aaPredicted RBP23.61■■□□□ 1.37
POP4-208ENST00000588551 RIMBP3CA6NJZ7 1639 aa23.6■■□□□ 1.37
POP4-208ENST00000588551 RIMBP3BA6NNM3 1639 aa23.6■■□□□ 1.37
POP4-208ENST00000588551 RIMBP3Q9UFD9 1639 aa23.6■■□□□ 1.37
POP4-208ENST00000588551 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
POP4-208ENST00000588551 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
POP4-208ENST00000588551 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
POP4-208ENST00000588551 IGF1RP08069 1367 aa23.52■■□□□ 1.36
POP4-208ENST00000588551 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
POP4-208ENST00000588551 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
POP4-208ENST00000588551 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
POP4-208ENST00000588551 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
POP4-208ENST00000588551 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
POP4-208ENST00000588551 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
POP4-208ENST00000588551 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
POP4-208ENST00000588551 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
POP4-208ENST00000588551 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
POP4-208ENST00000588551 NUP160Q12769 1436 aa23.33■■□□□ 1.32
POP4-208ENST00000588551 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
POP4-208ENST00000588551 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
POP4-208ENST00000588551 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
POP4-208ENST00000588551 CUL7Q14999 1698 aa23.21■■□□□ 1.31
POP4-208ENST00000588551 CSRNP3Q8WYN3 585 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms