RNA–Protein interactions for RNA: ENST00000588482.5

VASP-207, Transcript of vasodilator stimulated phosphoprotein, humanhuman

TSL 5

Gene VASP, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASP-207ENST00000588482 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
VASP-207ENST00000588482 ABCC9O60706 1549 aa25.92■■□□□ 1.74
VASP-207ENST00000588482 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.66
VASP-207ENST00000588482 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
VASP-207ENST00000588482 RB1CC1Q8TDY2 1594 aa24.43■■□□□ 1.5
VASP-207ENST00000588482 NACADO15069 1562 aa24.19■■□□□ 1.46
VASP-207ENST00000588482 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
VASP-207ENST00000588482 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.45
VASP-207ENST00000588482 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
VASP-207ENST00000588482 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
VASP-207ENST00000588482 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
VASP-207ENST00000588482 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.34
VASP-207ENST00000588482 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
VASP-207ENST00000588482 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
VASP-207ENST00000588482 CC2D2AQ9P2K1 1620 aa23.32■■□□□ 1.32
VASP-207ENST00000588482 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
VASP-207ENST00000588482 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
VASP-207ENST00000588482 EIF4G1Q04637 1599 aaKnown RBP23.19■■□□□ 1.3
VASP-207ENST00000588482 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
VASP-207ENST00000588482 CUX2O14529 1486 aa22.47■■□□□ 1.19
VASP-207ENST00000588482 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
VASP-207ENST00000588482 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
VASP-207ENST00000588482 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
VASP-207ENST00000588482 NESP48681 1621 aa22.14■■□□□ 1.14
VASP-207ENST00000588482 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
VASP-207ENST00000588482 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
VASP-207ENST00000588482 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
VASP-207ENST00000588482 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
VASP-207ENST00000588482 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
VASP-207ENST00000588482 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
VASP-207ENST00000588482 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
VASP-207ENST00000588482 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
VASP-207ENST00000588482 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
VASP-207ENST00000588482 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
VASP-207ENST00000588482 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
VASP-207ENST00000588482 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
VASP-207ENST00000588482 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
VASP-207ENST00000588482 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
VASP-207ENST00000588482 WDR62O43379 1518 aa21.56■■□□□ 1.04
VASP-207ENST00000588482 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
VASP-207ENST00000588482 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
VASP-207ENST00000588482 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
VASP-207ENST00000588482 WIZO95785 1651 aa21.43■■□□□ 1.02
VASP-207ENST00000588482 CFTRP13569 1480 aa21.36■■□□□ 1.01
VASP-207ENST00000588482 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
VASP-207ENST00000588482 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
VASP-207ENST00000588482 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
VASP-207ENST00000588482 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
VASP-207ENST00000588482 IFT140Q96RY7 1462 aa21.08■□□□□ 0.97
VASP-207ENST00000588482 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
VASP-207ENST00000588482 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
VASP-207ENST00000588482 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
VASP-207ENST00000588482 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
VASP-207ENST00000588482 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
VASP-207ENST00000588482 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
VASP-207ENST00000588482 TOPBP1Q92547 1522 aa20.97■□□□□ 0.95
VASP-207ENST00000588482 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
VASP-207ENST00000588482 TRHP20396 242 aaPredicted RBP20.9■□□□□ 0.94
VASP-207ENST00000588482 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.931e-11■■■■■ 46.4
VASP-207ENST00000588482 FBLN2P98095 1184 aa20.87■□□□□ 0.93
VASP-207ENST00000588482 EIF4G3O43432 1585 aaKnown RBP20.87■□□□□ 0.93
VASP-207ENST00000588482 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
VASP-207ENST00000588482 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
VASP-207ENST00000588482 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
VASP-207ENST00000588482 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
VASP-207ENST00000588482 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
VASP-207ENST00000588482 CHD1O14646 1710 aa20.71■□□□□ 0.91
VASP-207ENST00000588482 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
VASP-207ENST00000588482 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
VASP-207ENST00000588482 SOGA1O94964 1423 aa20.69■□□□□ 0.9
VASP-207ENST00000588482 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
VASP-207ENST00000588482 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
VASP-207ENST00000588482 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
VASP-207ENST00000588482 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
VASP-207ENST00000588482 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
VASP-207ENST00000588482 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
VASP-207ENST00000588482 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
VASP-207ENST00000588482 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
VASP-207ENST00000588482 WDR97A6NE52 1622 aa20.5■□□□□ 0.87
VASP-207ENST00000588482 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
VASP-207ENST00000588482 CUX1P39880 1505 aa20.47■□□□□ 0.87
VASP-207ENST00000588482 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
VASP-207ENST00000588482 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
VASP-207ENST00000588482 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
VASP-207ENST00000588482 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
VASP-207ENST00000588482 ERCC6L2Q5T890 1561 aa20.24■□□□□ 0.83
VASP-207ENST00000588482 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
VASP-207ENST00000588482 NUP160Q12769 1436 aa20.19■□□□□ 0.82
VASP-207ENST00000588482 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
VASP-207ENST00000588482 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
VASP-207ENST00000588482 FHAD1B1AJZ9 1412 aa20.13■□□□□ 0.81
VASP-207ENST00000588482 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
VASP-207ENST00000588482 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
VASP-207ENST00000588482 PRG4Q92954 1404 aaPredicted RBP20.07■□□□□ 0.8
VASP-207ENST00000588482 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
VASP-207ENST00000588482 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
VASP-207ENST00000588482 FAM69CQ0P6D2 419 aa20.02■□□□□ 0.8
VASP-207ENST00000588482 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.79
VASP-207ENST00000588482 NPM1P06748 294 aaKnown RBP eCLIP20■□□□□ 0.79
VASP-207ENST00000588482 TOP2BQ02880 1626 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms