RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
CNN1-207ENST00000588468 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
CNN1-207ENST00000588468 ABCC9O60706 1549 aa21.51■■□□□ 1.03
CNN1-207ENST00000588468 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
CNN1-207ENST00000588468 NACADO15069 1562 aa20.69■□□□□ 0.9
CNN1-207ENST00000588468 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
CNN1-207ENST00000588468 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
CNN1-207ENST00000588468 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
CNN1-207ENST00000588468 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
CNN1-207ENST00000588468 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
CNN1-207ENST00000588468 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
CNN1-207ENST00000588468 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
CNN1-207ENST00000588468 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
CNN1-207ENST00000588468 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
CNN1-207ENST00000588468 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
CNN1-207ENST00000588468 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.73
CNN1-207ENST00000588468 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.72
CNN1-207ENST00000588468 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
CNN1-207ENST00000588468 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
CNN1-207ENST00000588468 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
CNN1-207ENST00000588468 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
CNN1-207ENST00000588468 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
CNN1-207ENST00000588468 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.63
CNN1-207ENST00000588468 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
CNN1-207ENST00000588468 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
CNN1-207ENST00000588468 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
CNN1-207ENST00000588468 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
CNN1-207ENST00000588468 WIZO95785 1651 aa18.72■□□□□ 0.59
CNN1-207ENST00000588468 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
CNN1-207ENST00000588468 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
CNN1-207ENST00000588468 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
CNN1-207ENST00000588468 NESP48681 1621 aa18.56■□□□□ 0.56
CNN1-207ENST00000588468 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
CNN1-207ENST00000588468 CUX2O14529 1486 aa18.51■□□□□ 0.55
CNN1-207ENST00000588468 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
CNN1-207ENST00000588468 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
CNN1-207ENST00000588468 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
CNN1-207ENST00000588468 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
CNN1-207ENST00000588468 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
CNN1-207ENST00000588468 CFTRP13569 1480 aa18.33■□□□□ 0.53
CNN1-207ENST00000588468 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
CNN1-207ENST00000588468 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
CNN1-207ENST00000588468 WDR62O43379 1518 aa18.26■□□□□ 0.51
CNN1-207ENST00000588468 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
CNN1-207ENST00000588468 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
CNN1-207ENST00000588468 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
CNN1-207ENST00000588468 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
CNN1-207ENST00000588468 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
CNN1-207ENST00000588468 DNAJC5Q9H3Z4 198 aa17.96■□□□□ 0.47
CNN1-207ENST00000588468 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
CNN1-207ENST00000588468 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
CNN1-207ENST00000588468 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
CNN1-207ENST00000588468 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
CNN1-207ENST00000588468 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
CNN1-207ENST00000588468 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
CNN1-207ENST00000588468 CUX1P39880 1505 aa17.77■□□□□ 0.43
CNN1-207ENST00000588468 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
CNN1-207ENST00000588468 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
CNN1-207ENST00000588468 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
CNN1-207ENST00000588468 SOGA1O94964 1423 aa17.66■□□□□ 0.42
CNN1-207ENST00000588468 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
CNN1-207ENST00000588468 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
CNN1-207ENST00000588468 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
CNN1-207ENST00000588468 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.41
CNN1-207ENST00000588468 CHD1O14646 1710 aa17.61■□□□□ 0.41
CNN1-207ENST00000588468 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
CNN1-207ENST00000588468 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
CNN1-207ENST00000588468 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
CNN1-207ENST00000588468 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
CNN1-207ENST00000588468 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
CNN1-207ENST00000588468 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
CNN1-207ENST00000588468 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
CNN1-207ENST00000588468 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
CNN1-207ENST00000588468 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
CNN1-207ENST00000588468 SNAPC4Q5SXM2 1469 aa17.52■□□□□ 0.4
CNN1-207ENST00000588468 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
CNN1-207ENST00000588468 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
CNN1-207ENST00000588468 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
CNN1-207ENST00000588468 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
CNN1-207ENST00000588468 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
CNN1-207ENST00000588468 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
CNN1-207ENST00000588468 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
CNN1-207ENST00000588468 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
CNN1-207ENST00000588468 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
CNN1-207ENST00000588468 FBLN2P98095 1184 aa17.36■□□□□ 0.37
CNN1-207ENST00000588468 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
CNN1-207ENST00000588468 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
CNN1-207ENST00000588468 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
CNN1-207ENST00000588468 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
CNN1-207ENST00000588468 NUP160Q12769 1436 aa17.25■□□□□ 0.35
CNN1-207ENST00000588468 CUL7Q14999 1698 aa17.25■□□□□ 0.35
CNN1-207ENST00000588468 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
CNN1-207ENST00000588468 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
CNN1-207ENST00000588468 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
CNN1-207ENST00000588468 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
CNN1-207ENST00000588468 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
CNN1-207ENST00000588468 IGF1RP08069 1367 aa17.11■□□□□ 0.33
CNN1-207ENST00000588468 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
CNN1-207ENST00000588468 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
CNN1-207ENST00000588468 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms