RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
RPRD1A-206ENST00000588459 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
RPRD1A-206ENST00000588459 ABCC9O60706 1549 aa29.86■■■□□ 2.37
RPRD1A-206ENST00000588459 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
RPRD1A-206ENST00000588459 NACADO15069 1562 aa28.43■■■□□ 2.14
RPRD1A-206ENST00000588459 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
RPRD1A-206ENST00000588459 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
RPRD1A-206ENST00000588459 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
RPRD1A-206ENST00000588459 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
RPRD1A-206ENST00000588459 DCAF1Q9Y4B6 1507 aa27.93■■■□□ 2.06
RPRD1A-206ENST00000588459 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
RPRD1A-206ENST00000588459 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
RPRD1A-206ENST00000588459 DNAJC5BQ9UF47 199 aa27.62■■■□□ 2.01
RPRD1A-206ENST00000588459 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
RPRD1A-206ENST00000588459 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
RPRD1A-206ENST00000588459 EIF4G1Q04637 1599 aaKnown RBP27.01■■□□□ 1.92
RPRD1A-206ENST00000588459 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
RPRD1A-206ENST00000588459 CECR2Q9BXF3 1484 aa26.83■■□□□ 1.89
RPRD1A-206ENST00000588459 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
RPRD1A-206ENST00000588459 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
RPRD1A-206ENST00000588459 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
RPRD1A-206ENST00000588459 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
RPRD1A-206ENST00000588459 SMARCA2P51531 1590 aa26.18■■□□□ 1.78
RPRD1A-206ENST00000588459 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
RPRD1A-206ENST00000588459 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
RPRD1A-206ENST00000588459 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
RPRD1A-206ENST00000588459 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
RPRD1A-206ENST00000588459 WIZO95785 1651 aa25.84■■□□□ 1.73
RPRD1A-206ENST00000588459 NESP48681 1621 aa25.77■■□□□ 1.72
RPRD1A-206ENST00000588459 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
RPRD1A-206ENST00000588459 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
RPRD1A-206ENST00000588459 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
RPRD1A-206ENST00000588459 CUX2O14529 1486 aa25.52■■□□□ 1.68
RPRD1A-206ENST00000588459 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
RPRD1A-206ENST00000588459 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
RPRD1A-206ENST00000588459 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
RPRD1A-206ENST00000588459 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
RPRD1A-206ENST00000588459 THOC2Q8NI27 1593 aaKnown RBP25.43■■□□□ 1.66
RPRD1A-206ENST00000588459 CFTRP13569 1480 aa25.26■■□□□ 1.63
RPRD1A-206ENST00000588459 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
RPRD1A-206ENST00000588459 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
RPRD1A-206ENST00000588459 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
RPRD1A-206ENST00000588459 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
RPRD1A-206ENST00000588459 WDR62O43379 1518 aa25.14■■□□□ 1.62
RPRD1A-206ENST00000588459 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
RPRD1A-206ENST00000588459 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
RPRD1A-206ENST00000588459 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
RPRD1A-206ENST00000588459 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
RPRD1A-206ENST00000588459 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
RPRD1A-206ENST00000588459 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
RPRD1A-206ENST00000588459 ABCC8Q09428 1581 aa24.69■■□□□ 1.54
RPRD1A-206ENST00000588459 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
RPRD1A-206ENST00000588459 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
RPRD1A-206ENST00000588459 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
RPRD1A-206ENST00000588459 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
RPRD1A-206ENST00000588459 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
RPRD1A-206ENST00000588459 CUX1P39880 1505 aa24.51■■□□□ 1.51
RPRD1A-206ENST00000588459 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
RPRD1A-206ENST00000588459 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
RPRD1A-206ENST00000588459 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
RPRD1A-206ENST00000588459 SOGA1O94964 1423 aa24.43■■□□□ 1.5
RPRD1A-206ENST00000588459 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
RPRD1A-206ENST00000588459 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
RPRD1A-206ENST00000588459 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
RPRD1A-206ENST00000588459 CHD1O14646 1710 aa24.29■■□□□ 1.48
RPRD1A-206ENST00000588459 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
RPRD1A-206ENST00000588459 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
RPRD1A-206ENST00000588459 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
RPRD1A-206ENST00000588459 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
RPRD1A-206ENST00000588459 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
RPRD1A-206ENST00000588459 FBLN2P98095 1184 aa24.2■■□□□ 1.46
RPRD1A-206ENST00000588459 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
RPRD1A-206ENST00000588459 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
RPRD1A-206ENST00000588459 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
RPRD1A-206ENST00000588459 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
RPRD1A-206ENST00000588459 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
RPRD1A-206ENST00000588459 ABCA5Q8WWZ7 1642 aa24.14■■□□□ 1.46
RPRD1A-206ENST00000588459 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
RPRD1A-206ENST00000588459 RIMBP3CA6NJZ7 1639 aa24.12■■□□□ 1.45
RPRD1A-206ENST00000588459 RIMBP3BA6NNM3 1639 aa24.12■■□□□ 1.45
RPRD1A-206ENST00000588459 RIMBP3Q9UFD9 1639 aa24.12■■□□□ 1.45
RPRD1A-206ENST00000588459 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
RPRD1A-206ENST00000588459 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
RPRD1A-206ENST00000588459 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
RPRD1A-206ENST00000588459 CLASP1Q7Z460 1538 aa23.97■■□□□ 1.43
RPRD1A-206ENST00000588459 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
RPRD1A-206ENST00000588459 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
RPRD1A-206ENST00000588459 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
RPRD1A-206ENST00000588459 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
RPRD1A-206ENST00000588459 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
RPRD1A-206ENST00000588459 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.41
RPRD1A-206ENST00000588459 CEP170Q5SW79 1584 aa23.8■■□□□ 1.4
RPRD1A-206ENST00000588459 NUP160Q12769 1436 aa23.76■■□□□ 1.39
RPRD1A-206ENST00000588459 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
RPRD1A-206ENST00000588459 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
RPRD1A-206ENST00000588459 IGF1RP08069 1367 aa23.65■■□□□ 1.38
RPRD1A-206ENST00000588459 CUL7Q14999 1698 aa23.64■■□□□ 1.38
RPRD1A-206ENST00000588459 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
RPRD1A-206ENST00000588459 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
RPRD1A-206ENST00000588459 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms