RNA–Protein interactions for RNA: ENST00000588299.1

EIF3K-206, Transcript of eukaryotic translation initiation factor 3 subunit K, humanhuman

TSL 2

Gene EIF3K, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3K-206ENST00000588299 NISCHQ9Y2I1 1504 aa22.2■■□□□ 1.14
EIF3K-206ENST00000588299 ABCC9O60706 1549 aa19.92■□□□□ 0.78
EIF3K-206ENST00000588299 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
EIF3K-206ENST00000588299 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
EIF3K-206ENST00000588299 DNAJC5Q9H3Z4 198 aa18.77■□□□□ 0.6
EIF3K-206ENST00000588299 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
EIF3K-206ENST00000588299 NACADO15069 1562 aa18.47■□□□□ 0.55
EIF3K-206ENST00000588299 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
EIF3K-206ENST00000588299 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
EIF3K-206ENST00000588299 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.54
EIF3K-206ENST00000588299 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
EIF3K-206ENST00000588299 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
EIF3K-206ENST00000588299 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
EIF3K-206ENST00000588299 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
EIF3K-206ENST00000588299 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
EIF3K-206ENST00000588299 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
EIF3K-206ENST00000588299 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
EIF3K-206ENST00000588299 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
EIF3K-206ENST00000588299 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
EIF3K-206ENST00000588299 CUX2O14529 1486 aa17.58■□□□□ 0.41
EIF3K-206ENST00000588299 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
EIF3K-206ENST00000588299 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
EIF3K-206ENST00000588299 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
EIF3K-206ENST00000588299 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
EIF3K-206ENST00000588299 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
EIF3K-206ENST00000588299 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
EIF3K-206ENST00000588299 NCAPD3P42695 1498 aa17.06■□□□□ 0.32
EIF3K-206ENST00000588299 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
EIF3K-206ENST00000588299 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
EIF3K-206ENST00000588299 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
EIF3K-206ENST00000588299 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
EIF3K-206ENST00000588299 WIZO95785 1651 aa16.94■□□□□ 0.3
EIF3K-206ENST00000588299 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
EIF3K-206ENST00000588299 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.3
EIF3K-206ENST00000588299 NESP48681 1621 aa16.85■□□□□ 0.29
EIF3K-206ENST00000588299 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
EIF3K-206ENST00000588299 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
EIF3K-206ENST00000588299 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
EIF3K-206ENST00000588299 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
EIF3K-206ENST00000588299 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
EIF3K-206ENST00000588299 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
EIF3K-206ENST00000588299 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
EIF3K-206ENST00000588299 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
EIF3K-206ENST00000588299 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
EIF3K-206ENST00000588299 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
EIF3K-206ENST00000588299 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
EIF3K-206ENST00000588299 CFTRP13569 1480 aa16.49■□□□□ 0.23
EIF3K-206ENST00000588299 PDS5BQ9NTI5 1447 aa16.44■□□□□ 0.22
EIF3K-206ENST00000588299 WDR62O43379 1518 aa16.4■□□□□ 0.22
EIF3K-206ENST00000588299 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
EIF3K-206ENST00000588299 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
EIF3K-206ENST00000588299 ARHGEF11O15085 1522 aa16.36■□□□□ 0.21
EIF3K-206ENST00000588299 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
EIF3K-206ENST00000588299 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
EIF3K-206ENST00000588299 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
EIF3K-206ENST00000588299 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
EIF3K-206ENST00000588299 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
EIF3K-206ENST00000588299 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
EIF3K-206ENST00000588299 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
EIF3K-206ENST00000588299 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
EIF3K-206ENST00000588299 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
EIF3K-206ENST00000588299 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
EIF3K-206ENST00000588299 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
EIF3K-206ENST00000588299 CUX1P39880 1505 aa16.06■□□□□ 0.16
EIF3K-206ENST00000588299 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
EIF3K-206ENST00000588299 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
EIF3K-206ENST00000588299 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
EIF3K-206ENST00000588299 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
EIF3K-206ENST00000588299 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
EIF3K-206ENST00000588299 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
EIF3K-206ENST00000588299 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
EIF3K-206ENST00000588299 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
EIF3K-206ENST00000588299 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
EIF3K-206ENST00000588299 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
EIF3K-206ENST00000588299 SOGA1O94964 1423 aa15.92■□□□□ 0.14
EIF3K-206ENST00000588299 CHD1O14646 1710 aa15.85■□□□□ 0.13
EIF3K-206ENST00000588299 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.131e-9■□□□□ 10.6
EIF3K-206ENST00000588299 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
EIF3K-206ENST00000588299 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
EIF3K-206ENST00000588299 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
EIF3K-206ENST00000588299 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
EIF3K-206ENST00000588299 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
EIF3K-206ENST00000588299 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
EIF3K-206ENST00000588299 GRIN2BQ13224 1484 aa15.71■□□□□ 0.1
EIF3K-206ENST00000588299 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
EIF3K-206ENST00000588299 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
EIF3K-206ENST00000588299 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
EIF3K-206ENST00000588299 KDM4FA0A1W2PPD8 638 aa15.67■□□□□ 0.1
EIF3K-206ENST00000588299 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
EIF3K-206ENST00000588299 FBLN2P98095 1184 aa15.65■□□□□ 0.1
EIF3K-206ENST00000588299 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
EIF3K-206ENST00000588299 SYNJ2O15056 1496 aa15.6■□□□□ 0.09
EIF3K-206ENST00000588299 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
EIF3K-206ENST00000588299 ADAMTS12P58397 1594 aa15.58■□□□□ 0.09
EIF3K-206ENST00000588299 IGF1RP08069 1367 aa15.57■□□□□ 0.08
EIF3K-206ENST00000588299 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
EIF3K-206ENST00000588299 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
EIF3K-206ENST00000588299 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
EIF3K-206ENST00000588299 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.08
EIF3K-206ENST00000588299 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms